Wall clock time and date at job start Tue Mar 9 2021 13:08:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45206 * 1 3 3 C 1.34227 * 116.99743 * 2 1 4 4 O 1.20822 * 120.00100 * 359.97438 * 3 2 1 5 5 C 1.50705 * 119.99922 * 179.97438 * 3 2 1 6 6 C 1.52990 * 109.47161 * 179.97438 * 5 3 2 7 7 H 1.09000 * 112.90908 * 43.75564 * 6 5 3 8 8 C 1.53786 * 113.61464 * 175.00192 * 6 5 3 9 9 C 1.53781 * 87.17350 * 140.02626 * 8 6 5 10 10 H 1.09000 * 113.61379 * 219.89528 * 9 8 6 11 11 N 1.46505 * 113.61334 * 89.07333 * 9 8 6 12 12 C 1.34776 * 119.99597 * 154.99978 * 11 9 8 13 13 O 1.21553 * 120.00517 * 0.02562 * 12 11 9 14 14 C 1.47847 * 119.99757 * 180.02562 * 12 11 9 15 15 C 1.39545 * 120.14006 * 359.72469 * 14 12 11 16 16 C 1.38072 * 119.84199 * 179.72368 * 15 14 12 17 17 Br 1.89101 * 119.93905 * 180.27407 * 16 15 14 18 18 C 1.38422 * 120.12479 * 0.55418 * 16 15 14 19 19 C 1.38363 * 120.28177 * 359.72146 * 18 16 15 20 20 C 1.50698 * 119.92407 * 179.97438 * 19 18 16 21 21 O 1.42899 * 109.47390 * 245.02204 * 20 19 18 22 22 Si 1.86299 * 109.46960 * 5.02053 * 20 19 18 23 23 C 1.37945 * 120.15847 * 0.02562 * 19 18 16 24 24 C 1.53781 * 87.08070 * 334.52830 * 9 8 6 25 25 H 1.08997 * 109.46699 * 179.97438 * 1 2 3 26 26 H 1.08999 * 109.47430 * 300.00466 * 1 2 3 27 27 H 1.09002 * 109.46608 * 60.00396 * 1 2 3 28 28 H 1.09007 * 109.46435 * 60.00207 * 5 3 2 29 29 H 1.08994 * 109.47176 * 300.00511 * 5 3 2 30 30 H 1.09002 * 113.61357 * 25.43543 * 8 6 5 31 31 H 1.09002 * 113.61608 * 254.61705 * 8 6 5 32 32 H 0.96995 * 120.00170 * 335.00476 * 11 9 8 33 33 H 1.08001 * 120.07541 * 359.97438 * 15 14 12 34 34 H 1.07997 * 119.86222 * 179.74530 * 18 16 15 35 35 H 1.08997 * 109.47551 * 125.02066 * 20 19 18 36 36 H 0.96700 * 114.00075 * 59.99748 * 21 20 19 37 37 H 1.48505 * 110.00133 * 180.02562 * 22 20 19 38 38 H 1.48496 * 109.99858 * 301.31654 * 22 20 19 39 39 H 1.07993 * 120.06685 * 179.97438 * 23 19 18 40 40 H 1.09005 * 113.61471 * 139.98321 * 24 9 8 41 41 H 1.09003 * 113.61469 * 270.88099 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4521 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 0.0006 6 6 4.0001 2.7420 -0.0002 7 1 3.4247 3.3550 0.6935 8 6 5.5208 2.9349 0.1231 9 6 5.3841 4.0678 -0.9078 10 1 6.1923 4.0929 -1.6387 11 7 5.1181 5.3778 -0.3083 12 6 5.4621 6.5024 -0.9667 13 8 5.9925 6.4298 -2.0580 14 6 5.1942 7.8245 -0.3615 15 6 4.5802 7.9114 0.8886 16 6 4.3382 9.1491 1.4506 17 35 3.5133 9.2699 3.1480 18 6 4.6929 10.3019 0.7714 19 6 5.2967 10.2219 -0.4709 20 6 5.6790 11.4821 -1.2036 21 8 4.9056 11.5906 -2.4003 22 14 5.3491 12.9575 -0.1151 23 6 5.5487 8.9913 -1.0410 24 6 4.1190 3.3519 -1.4098 25 1 -0.3632 -1.0277 -0.0005 26 1 -0.3634 0.5139 0.8899 27 1 -0.3632 0.5138 -0.8901 28 1 3.9564 0.7806 -0.8893 29 1 3.9558 0.7809 0.8907 30 1 6.0995 2.0843 -0.2371 31 1 5.8392 3.2768 1.1079 32 1 4.6946 5.4358 0.5623 33 1 4.2988 7.0125 1.4171 34 1 4.4978 11.2679 1.2131 35 1 6.7384 11.4476 -1.4576 36 1 3.9511 11.6264 -2.2498 37 1 5.7213 14.2069 -0.8263 38 1 3.9139 12.9981 0.2642 39 1 6.0197 8.9305 -2.0109 40 1 3.3042 4.0306 -1.6622 41 1 4.3143 2.6152 -2.1892 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16627170_12335870.mol2 41 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:08:33 Heat of formation + Delta-G solvation = -91.407864 kcal Electronic energy + Delta-G solvation = -26370.170330 eV Core-core repulsion = 22264.143249 eV Total energy + Delta-G solvation = -4106.027082 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.045 amu Computer time = 0.71 seconds Orbital eigenvalues (eV) -41.91389 -41.46760 -40.49668 -39.27215 -37.83335 -37.49812 -34.97708 -33.65351 -33.06662 -31.39213 -30.48721 -28.45310 -27.06976 -26.68832 -25.90133 -24.20290 -22.85895 -21.88762 -21.74886 -20.26078 -19.26758 -18.59532 -17.99900 -17.80481 -17.62044 -17.47147 -17.29255 -16.58221 -16.43957 -16.15619 -15.85319 -15.60447 -15.22733 -15.00830 -14.93615 -14.71038 -14.29837 -14.19134 -14.11891 -13.59922 -13.35817 -13.31474 -13.06291 -12.97879 -12.70546 -12.30552 -12.08502 -11.98216 -11.83762 -11.83621 -11.74200 -11.48931 -11.39648 -11.24025 -11.21608 -10.71985 -10.41270 -10.12304 -9.93529 -4.98096 -0.54755 -0.18962 0.40636 1.18343 1.19796 1.48043 1.53982 1.79071 1.87911 1.95154 2.42658 3.22851 3.30045 3.41510 3.45344 3.49374 3.73772 3.79833 3.83116 3.85842 3.92087 3.93594 4.17578 4.25202 4.26837 4.27245 4.40558 4.50090 4.53935 4.60531 4.68079 4.72814 4.75545 4.80736 4.86657 4.89989 5.02413 5.06409 5.10154 5.17240 5.34798 5.41796 5.56152 6.32209 6.40553 6.71644 6.99727 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.368 6.368 3 C 0.454 3.546 4 O -0.543 6.543 5 C -0.100 4.100 6 C -0.098 4.098 7 H 0.092 0.908 8 C -0.118 4.118 9 C 0.109 3.891 10 H 0.093 0.907 11 N -0.695 5.695 12 C 0.562 3.438 13 O -0.571 6.571 14 C -0.136 4.136 15 C -0.045 4.045 16 C -0.099 4.099 17 Br -0.029 7.029 18 C -0.062 4.062 19 C -0.113 4.113 20 C -0.084 4.084 21 O -0.545 6.545 22 Si 0.764 3.236 23 C -0.028 4.028 24 C -0.150 4.150 25 H 0.127 0.873 26 H 0.060 0.940 27 H 0.057 0.943 28 H 0.129 0.871 29 H 0.135 0.865 30 H 0.122 0.878 31 H 0.092 0.908 32 H 0.413 0.587 33 H 0.159 0.841 34 H 0.157 0.843 35 H 0.132 0.868 36 H 0.388 0.612 37 H -0.297 1.297 38 H -0.273 1.273 39 H 0.133 0.867 40 H 0.048 0.952 41 H 0.103 0.897 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.201 -4.010 6.018 7.331 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.285 6.285 3 C 0.299 3.701 4 O -0.433 6.433 5 C -0.137 4.137 6 C -0.116 4.116 7 H 0.110 0.890 8 C -0.156 4.156 9 C 0.004 3.996 10 H 0.111 0.889 11 N -0.346 5.346 12 C 0.350 3.650 13 O -0.451 6.451 14 C -0.140 4.140 15 C -0.065 4.065 16 C -0.179 4.179 17 Br 0.057 6.943 18 C -0.081 4.081 19 C -0.114 4.114 20 C -0.192 4.192 21 O -0.354 6.354 22 Si 0.668 3.332 23 C -0.047 4.047 24 C -0.189 4.189 25 H 0.145 0.855 26 H 0.079 0.921 27 H 0.076 0.924 28 H 0.147 0.853 29 H 0.153 0.847 30 H 0.140 0.860 31 H 0.111 0.889 32 H 0.251 0.749 33 H 0.176 0.824 34 H 0.174 0.826 35 H 0.149 0.851 36 H 0.237 0.763 37 H -0.224 1.224 38 H -0.199 1.199 39 H 0.151 0.849 40 H 0.067 0.933 41 H 0.121 0.879 Dipole moment (debyes) X Y Z Total from point charges 1.172 -3.049 5.728 6.594 hybrid contribution -1.499 -0.111 -1.076 1.849 sum -0.327 -3.160 4.652 5.633 Atomic orbital electron populations 1.23463 0.75400 1.05403 1.02205 1.86516 1.24529 1.33630 1.83815 1.24601 0.93658 0.80793 0.71013 1.90672 1.68335 1.37424 1.46831 1.21585 0.84939 0.98966 1.08251 1.22498 0.97191 0.94253 0.97703 0.89005 1.23355 0.94681 0.97705 0.99830 1.21956 0.98323 0.81711 0.97622 0.88894 1.45521 1.61568 1.04796 1.22738 1.18339 0.77589 0.84716 0.84397 1.90795 1.44583 1.87747 1.21952 1.19873 1.04664 0.93248 0.96255 1.21443 0.94191 0.97660 0.93219 1.21729 1.05381 0.95664 0.95081 1.96857 1.79208 1.98876 1.19382 1.21426 0.94677 0.98531 0.93483 1.20262 1.00352 0.95759 0.95011 1.25316 1.00259 1.01432 0.92240 1.86617 1.23227 1.95284 1.30234 0.94129 0.82396 0.73360 0.83285 1.21278 0.93852 0.90574 0.99036 1.23612 0.97457 1.00050 0.97782 0.85526 0.92134 0.92445 0.85340 0.84676 0.85972 0.88946 0.74945 0.82385 0.82630 0.85068 0.76298 1.22426 1.19945 0.84946 0.93276 0.87893 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 113.37 1.20 1.16 16 2 O -0.37 -0.59 10.57 -51.38 -0.54 -1.13 16 3 C 0.45 0.85 7.96 71.24 0.57 1.42 16 4 O -0.54 -4.78 15.51 21.98 0.34 -4.44 16 5 C -0.10 0.66 5.65 29.85 0.17 0.83 16 6 C -0.10 0.50 3.04 -10.18 -0.03 0.47 16 7 H 0.09 -0.25 7.68 -2.39 -0.02 -0.27 16 8 C -0.12 1.00 7.38 31.12 0.23 1.23 16 9 C 0.11 -0.17 4.32 45.52 0.20 0.02 16 10 H 0.09 0.19 7.46 -2.39 -0.02 0.17 16 11 N -0.69 0.46 5.21 -442.89 -2.31 -1.85 16 12 C 0.56 3.17 7.77 86.79 0.67 3.84 16 13 O -0.57 -7.95 15.95 -3.88 -0.06 -8.02 16 14 C -0.14 -0.32 5.87 -20.09 -0.12 -0.44 16 15 C -0.04 0.08 9.28 22.55 0.21 0.29 16 16 C -0.10 0.15 6.22 22.27 0.14 0.29 16 17 Br -0.03 0.05 33.69 -20.37 -0.69 -0.64 16 18 C -0.06 0.13 8.40 22.34 0.19 0.32 16 19 C -0.11 0.05 5.35 -19.90 -0.11 -0.06 16 20 C -0.08 0.10 2.80 71.24 0.20 0.30 16 21 O -0.55 -1.42 12.83 -148.98 -1.91 -3.33 16 22 Si 0.76 -2.42 29.87 68.60 2.05 -0.37 16 23 C -0.03 -0.09 9.23 22.53 0.21 0.12 16 24 C -0.15 0.17 7.44 31.21 0.23 0.40 16 25 H 0.13 -0.85 8.14 -2.39 -0.02 -0.87 16 26 H 0.06 -0.04 8.13 -2.39 -0.02 -0.06 16 27 H 0.06 -0.01 8.13 -2.39 -0.02 -0.03 16 28 H 0.13 -1.29 7.85 -2.38 -0.02 -1.30 16 29 H 0.14 -1.52 8.14 -2.39 -0.02 -1.54 16 30 H 0.12 -1.44 8.10 -2.39 -0.02 -1.46 16 31 H 0.09 -0.95 8.14 -2.39 -0.02 -0.96 16 32 H 0.41 -2.40 6.74 -92.71 -0.62 -3.02 16 33 H 0.16 -1.07 6.40 -2.91 -0.02 -1.09 16 34 H 0.16 -0.81 4.82 -2.91 -0.01 -0.83 16 35 H 0.13 -0.36 7.96 -2.39 -0.02 -0.38 16 36 H 0.39 -1.25 8.70 -74.06 -0.64 -1.89 16 37 H -0.30 -1.37 7.11 99.48 0.71 -0.66 16 38 H -0.27 0.06 7.00 99.48 0.70 0.76 16 39 H 0.13 0.83 7.65 -2.91 -0.02 0.81 16 40 H 0.05 0.22 8.14 -2.38 -0.02 0.20 16 41 H 0.10 -0.33 7.90 -2.39 -0.02 -0.35 16 Total: 0.00 -23.05 369.11 0.68 -22.37 By element: Atomic # 1 Polarization: -12.63 SS G_CDS: -0.15 Total: -12.78 kcal Atomic # 6 Polarization: 6.24 SS G_CDS: 3.95 Total: 10.19 kcal Atomic # 7 Polarization: 0.46 SS G_CDS: -2.31 Total: -1.85 kcal Atomic # 8 Polarization: -14.75 SS G_CDS: -2.18 Total: -16.92 kcal Atomic # 14 Polarization: -2.42 SS G_CDS: 2.05 Total: -0.37 kcal Atomic # 35 Polarization: 0.05 SS G_CDS: -0.69 Total: -0.64 kcal Total: -23.05 0.68 -22.37 kcal The number of atoms in the molecule is 41 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_12335870.mol2 41 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -69.038 kcal (2) G-P(sol) polarization free energy of solvation -23.052 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -92.091 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.683 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.370 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.408 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.71 seconds