Wall clock time and date at job start Tue Mar 9 2021 13:11:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34225 * 117.00305 * 2 1 4 4 O 1.20833 * 119.99691 * 359.97438 * 3 2 1 5 5 C 1.50690 * 120.00232 * 179.97438 * 3 2 1 6 6 C 1.53007 * 109.47214 * 179.97438 * 5 3 2 7 7 H 1.08992 * 112.90728 * 43.75349 * 6 5 3 8 8 C 1.53786 * 113.61221 * 174.99793 * 6 5 3 9 9 C 1.53787 * 87.07861 * 139.98287 * 8 6 5 10 10 H 1.08998 * 113.61395 * 219.93730 * 9 8 6 11 11 N 1.46498 * 113.61500 * 89.11558 * 9 8 6 12 12 C 1.34775 * 120.00131 * 156.52880 * 11 9 8 13 13 O 1.21283 * 120.00054 * 0.02562 * 12 11 9 14 14 C 1.50698 * 119.99795 * 180.02562 * 12 11 9 15 15 O 1.42902 * 109.46917 * 180.02562 * 14 12 11 16 16 C 1.35986 * 117.00267 * 180.02562 * 15 14 12 17 17 C 1.38673 * 120.00396 * 179.72725 * 16 15 14 18 18 C 1.50706 * 119.99592 * 0.24775 * 17 16 15 19 19 O 1.42901 * 109.47137 * 285.00265 * 18 17 16 20 20 Si 1.86298 * 109.46825 * 165.00439 * 18 17 16 21 21 C 1.38150 * 120.00115 * 180.29943 * 17 16 15 22 22 C 1.38675 * 120.00030 * 359.94943 * 21 17 16 23 23 O 1.35982 * 119.99930 * 180.02562 * 22 21 17 24 24 C 1.42899 * 117.00071 * 180.02562 * 23 22 21 25 25 C 1.38723 * 120.00068 * 0.04591 * 22 21 17 26 26 C 1.38104 * 119.99814 * 359.97438 * 25 22 21 27 27 C 1.53781 * 87.17220 * 334.52609 * 9 8 6 28 28 H 1.08995 * 109.47457 * 300.00593 * 1 2 3 29 29 H 1.09004 * 109.47048 * 60.00374 * 1 2 3 30 30 H 1.09003 * 109.47399 * 180.02562 * 1 2 3 31 31 H 1.09003 * 109.47470 * 59.99946 * 5 3 2 32 32 H 1.08998 * 109.47163 * 299.99706 * 5 3 2 33 33 H 1.08997 * 113.61337 * 25.43857 * 8 6 5 34 34 H 1.08998 * 113.61618 * 254.52777 * 8 6 5 35 35 H 0.97005 * 119.99544 * 336.53148 * 11 9 8 36 36 H 1.08997 * 109.47263 * 60.00602 * 14 12 11 37 37 H 1.08997 * 109.47340 * 300.00004 * 14 12 11 38 38 H 1.09002 * 109.47044 * 45.00532 * 18 17 16 39 39 H 0.96701 * 113.99479 * 180.02562 * 19 18 17 40 40 H 1.48504 * 110.00179 * 298.68351 * 20 18 17 41 41 H 1.48500 * 110.00312 * 59.99765 * 20 18 17 42 42 H 1.08006 * 119.99972 * 179.97438 * 21 17 16 43 43 H 1.08997 * 109.47100 * 300.00148 * 24 23 22 44 44 H 1.09011 * 109.46913 * 59.99860 * 24 23 22 45 45 H 1.08997 * 109.47498 * 179.97438 * 24 23 22 46 46 H 1.07991 * 119.99757 * 180.02562 * 25 22 21 47 47 H 1.08000 * 120.00286 * 179.97438 * 26 25 22 48 48 H 1.08996 * 113.61693 * 140.02187 * 27 9 8 49 49 H 1.08997 * 113.61775 * 270.92513 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 6 4.0002 2.7420 -0.0002 7 1 3.4247 3.3549 0.6935 8 6 5.5209 2.9348 0.1232 9 6 5.3819 4.0665 -0.9088 10 1 6.1891 4.0913 -1.6409 11 7 5.1161 5.3770 -0.3104 12 6 5.4303 6.5015 -0.9836 13 8 5.9326 6.4285 -2.0851 14 6 5.1573 7.8495 -0.3677 15 8 5.5740 8.8778 -1.2683 16 6 5.3969 10.1634 -0.8621 17 6 5.7845 11.2103 -1.6848 18 6 6.3969 10.9232 -3.0316 19 8 7.7432 10.4770 -2.8573 20 14 6.3854 12.4749 -4.0624 21 6 5.6102 12.5163 -1.2694 22 6 5.0467 12.7804 -0.0302 23 8 4.8747 14.0659 0.3785 24 6 4.2887 14.2643 1.6666 25 6 4.6589 11.7332 0.7929 26 6 4.8335 10.4276 0.3778 27 6 4.1169 3.3504 -1.4106 28 1 -0.3634 0.5139 0.8899 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3634 -1.0277 0.0005 31 1 3.9564 0.7805 -0.8891 32 1 3.9557 0.7809 0.8908 33 1 6.0994 2.0841 -0.2370 34 1 5.8391 3.2781 1.1075 35 1 4.7140 5.4353 0.5705 36 1 5.7092 7.9400 0.5678 37 1 4.0899 7.9498 -0.1712 38 1 5.8195 10.1480 -3.5354 39 1 8.2003 10.2736 -3.6848 40 1 4.9887 12.9315 -4.2776 41 1 7.1692 13.5397 -3.3863 42 1 5.9124 13.3316 -1.9100 43 1 3.2958 13.8151 1.6872 44 1 4.9149 13.7966 2.4265 45 1 4.2089 15.3323 1.8689 46 1 4.2197 11.9389 1.7577 47 1 4.5320 9.6122 1.0186 48 1 3.3024 4.0290 -1.6637 49 1 4.3123 2.6132 -2.1893 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16627170_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:33 Heat of formation + Delta-G solvation = -162.778735 kcal Electronic energy + Delta-G solvation = -32505.729891 eV Core-core repulsion = 27787.986317 eV Total energy + Delta-G solvation = -4717.743574 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 1.03 seconds Orbital eigenvalues (eV) -41.93782 -41.68911 -41.09805 -40.17239 -39.28214 -38.09269 -37.49067 -37.03863 -34.78736 -33.04705 -31.83420 -31.04147 -29.42949 -28.34892 -28.03878 -26.68589 -26.64880 -24.78985 -23.75638 -22.42399 -21.94761 -21.87443 -20.25144 -19.48734 -18.76203 -18.67506 -18.46990 -18.44770 -17.79503 -17.59989 -17.46174 -17.42688 -16.93470 -16.74776 -16.12269 -15.88640 -15.76335 -15.59574 -15.32459 -15.23868 -15.10300 -14.73468 -14.62234 -14.13560 -14.11040 -13.99134 -13.80954 -13.64008 -13.50723 -13.34492 -13.18973 -12.97484 -12.71230 -12.62830 -12.56905 -12.07048 -12.06302 -11.83527 -11.82309 -11.72613 -11.53627 -11.39439 -11.20734 -11.03444 -10.32196 -10.24936 -10.15697 -8.93626 -5.00573 -0.10008 0.21205 1.18310 1.24684 1.39772 1.42626 1.58923 1.79376 1.90096 2.19313 2.39699 2.53893 3.37269 3.44914 3.46478 3.49671 3.58544 3.75498 3.79198 3.84262 3.90938 3.92497 3.95821 4.02517 4.04594 4.13398 4.25421 4.27379 4.29229 4.31862 4.32382 4.41937 4.50885 4.54621 4.61411 4.66439 4.68488 4.76337 4.81868 4.86945 4.88214 5.00103 5.04514 5.05898 5.10851 5.19689 5.28527 5.42140 5.57869 6.07792 6.29106 6.42249 6.71629 6.86618 7.09235 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.029 3.971 2 O -0.369 6.369 3 C 0.455 3.545 4 O -0.543 6.543 5 C -0.102 4.102 6 C -0.096 4.096 7 H 0.094 0.906 8 C -0.117 4.117 9 C 0.111 3.889 10 H 0.087 0.913 11 N -0.695 5.695 12 C 0.516 3.484 13 O -0.565 6.565 14 C 0.033 3.967 15 O -0.303 6.303 16 C 0.104 3.896 17 C -0.090 4.090 18 C -0.074 4.074 19 O -0.559 6.559 20 Si 0.781 3.219 21 C -0.142 4.142 22 C 0.086 3.914 23 O -0.341 6.341 24 C 0.017 3.983 25 C -0.156 4.156 26 C -0.161 4.161 27 C -0.151 4.151 28 H 0.060 0.940 29 H 0.057 0.943 30 H 0.126 0.874 31 H 0.127 0.873 32 H 0.135 0.865 33 H 0.119 0.881 34 H 0.094 0.906 35 H 0.419 0.581 36 H 0.123 0.877 37 H 0.121 0.879 38 H 0.074 0.926 39 H 0.399 0.601 40 H -0.288 1.288 41 H -0.286 1.286 42 H 0.126 0.874 43 H 0.070 0.930 44 H 0.069 0.931 45 H 0.115 0.885 46 H 0.167 0.833 47 H 0.173 0.827 48 H 0.049 0.951 49 H 0.100 0.900 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.328 -5.723 5.553 8.084 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.065 4.065 2 O -0.285 6.285 3 C 0.300 3.700 4 O -0.433 6.433 5 C -0.138 4.138 6 C -0.114 4.114 7 H 0.113 0.887 8 C -0.155 4.155 9 C 0.006 3.994 10 H 0.105 0.895 11 N -0.348 5.348 12 C 0.302 3.698 13 O -0.443 6.443 14 C -0.045 4.045 15 O -0.216 6.216 16 C 0.058 3.942 17 C -0.091 4.091 18 C -0.183 4.183 19 O -0.369 6.369 20 Si 0.686 3.314 21 C -0.160 4.160 22 C 0.041 3.959 23 O -0.255 6.255 24 C -0.077 4.077 25 C -0.175 4.175 26 C -0.179 4.179 27 C -0.190 4.190 28 H 0.079 0.921 29 H 0.076 0.924 30 H 0.145 0.855 31 H 0.145 0.855 32 H 0.153 0.847 33 H 0.137 0.863 34 H 0.112 0.888 35 H 0.256 0.744 36 H 0.141 0.859 37 H 0.139 0.861 38 H 0.092 0.908 39 H 0.249 0.751 40 H -0.215 1.215 41 H -0.214 1.214 42 H 0.143 0.857 43 H 0.088 0.912 44 H 0.088 0.912 45 H 0.134 0.866 46 H 0.185 0.815 47 H 0.190 0.810 48 H 0.068 0.932 49 H 0.118 0.882 Dipole moment (debyes) X Y Z Total from point charges -1.442 -4.477 5.077 6.921 hybrid contribution -1.107 -0.028 0.950 1.458 sum -2.548 -4.505 6.026 7.944 Atomic orbital electron populations 1.23464 0.75379 1.05413 1.02220 1.86515 1.24553 1.33668 1.83809 1.24593 0.93643 0.80787 0.70998 1.90670 1.68332 1.37397 1.46853 1.21595 0.84951 0.99117 1.08182 1.22499 0.97127 0.94148 0.97659 0.88735 1.23339 0.94709 0.97614 0.99823 1.21897 0.98107 0.81838 0.97540 0.89502 1.45378 1.63515 1.04175 1.21770 1.20424 0.77634 0.86347 0.85350 1.90754 1.43998 1.87735 1.21763 1.22743 1.03745 0.84188 0.93788 1.86181 1.79595 1.11863 1.44004 1.18767 0.98115 0.83481 0.93791 1.18700 1.02913 0.90607 0.96850 1.24746 0.85913 1.10229 0.97432 1.86437 1.23744 1.89282 1.37405 0.94374 0.79327 0.73155 0.84566 1.20133 1.04273 0.95431 0.96208 1.18919 0.98533 0.84530 0.93884 1.86071 1.78521 1.23044 1.37892 1.23394 0.98207 1.04906 0.81235 1.21426 1.03205 0.91411 1.01413 1.21471 1.02381 0.98695 0.95340 1.23606 0.97558 1.00057 0.97750 0.92112 0.92420 0.85541 0.85471 0.84712 0.86258 0.88784 0.74373 0.85894 0.86099 0.90787 0.75051 1.21505 1.21401 0.85691 0.91175 0.91224 0.86632 0.81546 0.81006 0.93171 0.88194 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.05 10.56 113.37 1.20 1.15 16 2 O -0.37 -0.45 10.56 -51.37 -0.54 -0.99 16 3 C 0.45 0.62 7.96 71.23 0.57 1.18 16 4 O -0.54 -4.39 15.51 21.94 0.34 -4.05 16 5 C -0.10 0.71 5.65 29.85 0.17 0.88 16 6 C -0.10 0.57 3.04 -10.17 -0.03 0.54 16 7 H 0.09 -0.38 7.68 -2.39 -0.02 -0.40 16 8 C -0.12 1.06 7.38 31.12 0.23 1.29 16 9 C 0.11 -0.24 4.30 45.52 0.20 -0.05 16 10 H 0.09 0.21 7.50 -2.39 -0.02 0.19 16 11 N -0.69 1.86 5.26 -440.04 -2.32 -0.45 16 12 C 0.52 2.33 7.91 87.66 0.69 3.02 16 13 O -0.56 -8.71 16.12 16.00 0.26 -8.46 16 14 C 0.03 -0.01 5.22 71.24 0.37 0.36 16 15 O -0.30 -2.80 9.00 -74.35 -0.67 -3.47 16 16 C 0.10 0.88 6.66 22.49 0.15 1.03 16 17 C -0.09 -1.02 5.30 -19.78 -0.10 -1.12 16 18 C -0.07 -0.62 2.36 71.24 0.17 -0.45 16 19 O -0.56 -4.87 12.86 -148.98 -1.92 -6.78 16 20 Si 0.78 3.30 30.20 68.60 2.07 5.37 16 21 C -0.14 -1.65 8.59 22.35 0.19 -1.46 16 22 C 0.09 0.73 6.69 22.49 0.15 0.88 16 23 O -0.34 -2.58 10.50 -93.35 -0.98 -3.56 16 24 C 0.02 -0.04 9.81 113.37 1.11 1.07 16 25 C -0.16 -0.37 9.03 22.35 0.20 -0.17 16 26 C -0.16 -0.30 9.03 22.35 0.20 -0.09 16 27 C -0.15 0.24 7.45 31.21 0.23 0.47 16 28 H 0.06 -0.08 8.13 -2.39 -0.02 -0.10 16 29 H 0.06 -0.03 8.13 -2.39 -0.02 -0.05 16 30 H 0.13 -0.90 8.14 -2.39 -0.02 -0.92 16 31 H 0.13 -1.29 7.85 -2.39 -0.02 -1.31 16 32 H 0.14 -1.57 8.14 -2.39 -0.02 -1.59 16 33 H 0.12 -1.41 8.10 -2.39 -0.02 -1.43 16 34 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 35 H 0.42 -3.95 8.70 -92.70 -0.81 -4.76 16 36 H 0.12 -0.82 7.66 -2.39 -0.02 -0.84 16 37 H 0.12 -0.79 7.66 -2.39 -0.02 -0.80 16 38 H 0.07 0.60 7.83 -2.39 -0.02 0.58 16 39 H 0.40 -0.62 8.74 -74.06 -0.65 -1.26 16 40 H -0.29 -2.72 7.11 99.48 0.71 -2.01 16 41 H -0.29 -2.90 6.75 99.48 0.67 -2.23 16 42 H 0.13 1.55 4.90 -2.91 -0.01 1.54 16 43 H 0.07 -0.36 7.66 -2.39 -0.02 -0.38 16 44 H 0.07 -0.34 7.66 -2.38 -0.02 -0.36 16 45 H 0.12 -0.61 8.14 -2.39 -0.02 -0.63 16 46 H 0.17 -0.75 6.29 -2.92 -0.02 -0.77 16 47 H 0.17 -1.13 6.29 -2.91 -0.02 -1.15 16 48 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 49 H 0.10 -0.32 7.90 -2.39 -0.02 -0.34 16 Total: 0.00 -35.27 410.19 1.49 -33.77 By element: Atomic # 1 Polarization: -19.46 SS G_CDS: -0.45 Total: -19.91 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: 5.70 Total: 8.54 kcal Atomic # 7 Polarization: 1.86 SS G_CDS: -2.32 Total: -0.45 kcal Atomic # 8 Polarization: -23.80 SS G_CDS: -3.51 Total: -27.31 kcal Atomic # 14 Polarization: 3.30 SS G_CDS: 2.07 Total: 5.37 kcal Total: -35.27 1.49 -33.77 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -129.007 kcal (2) G-P(sol) polarization free energy of solvation -35.265 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -164.273 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.494 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.771 kcal (6) G-S(sol) free energy of system = (1) + (5) -162.779 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.03 seconds