Wall clock time and date at job start Tue Mar 9 2021 13:11:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45195 * 1 3 3 C 1.34231 * 116.99968 * 2 1 4 4 O 1.20829 * 119.99843 * 359.97438 * 3 2 1 5 5 C 1.50700 * 120.00138 * 179.97438 * 3 2 1 6 6 C 1.52993 * 109.47174 * 179.97438 * 5 3 2 7 7 H 1.09000 * 112.85166 * 316.19741 * 6 5 3 8 8 C 1.53786 * 113.68953 * 87.46604 * 6 5 3 9 9 C 1.53787 * 87.08169 * 139.99418 * 8 6 5 10 10 H 1.09001 * 113.68255 * 220.00996 * 9 8 6 11 11 N 1.46497 * 113.61668 * 89.11277 * 9 8 6 12 12 C 1.34777 * 119.99525 * 107.50061 * 11 9 8 13 13 O 1.21283 * 120.00463 * 0.02562 * 12 11 9 14 14 C 1.50700 * 119.99675 * 179.72583 * 12 11 9 15 15 O 1.42899 * 109.47143 * 180.27800 * 14 12 11 16 16 C 1.35996 * 117.00323 * 179.97438 * 15 14 12 17 17 C 1.39150 * 120.07700 * 179.72282 * 16 15 14 18 18 O 1.36002 * 120.07135 * 0.02562 * 17 16 15 19 19 C 1.42900 * 116.99695 * 179.97438 * 18 17 16 20 20 C 1.38560 * 119.85703 * 179.72111 * 17 16 15 21 21 C 1.38249 * 119.99753 * 0.55973 * 20 17 16 22 22 C 1.50694 * 119.92789 * 179.69538 * 21 20 17 23 23 O 1.42903 * 109.46889 * 65.02113 * 22 21 20 24 24 Si 1.86299 * 109.47345 * 185.01885 * 22 21 20 25 25 C 1.38247 * 120.14422 * 359.71953 * 21 20 17 26 26 C 1.38250 * 120.14852 * 359.97438 * 25 21 20 27 27 C 1.53784 * 87.07862 * 334.56394 * 9 8 6 28 28 H 1.09003 * 109.47481 * 300.00310 * 1 2 3 29 29 H 1.08999 * 109.47138 * 60.00395 * 1 2 3 30 30 H 1.09004 * 109.46744 * 180.02562 * 1 2 3 31 31 H 1.09002 * 109.47054 * 59.99674 * 5 3 2 32 32 H 1.08998 * 109.46955 * 299.99771 * 5 3 2 33 33 H 1.09001 * 113.61468 * 25.44302 * 8 6 5 34 34 H 1.09007 * 113.61094 * 254.53810 * 8 6 5 35 35 H 0.97000 * 120.00580 * 287.50807 * 11 9 8 36 36 H 1.09009 * 109.47352 * 300.27556 * 14 12 11 37 37 H 1.08998 * 109.47585 * 60.27844 * 14 12 11 38 38 H 1.08993 * 109.47320 * 299.99285 * 19 18 17 39 39 H 1.09002 * 109.47278 * 59.99837 * 19 18 17 40 40 H 1.09001 * 109.46450 * 179.97438 * 19 18 17 41 41 H 1.08000 * 120.00614 * 180.27309 * 20 17 16 42 42 H 1.09004 * 109.47334 * 305.02375 * 22 21 20 43 43 H 0.96697 * 113.99825 * 60.00681 * 23 22 21 44 44 H 1.48501 * 110.00285 * 179.97438 * 24 22 21 45 45 H 1.48504 * 110.00169 * 301.32373 * 24 22 21 46 46 H 1.07999 * 119.92939 * 180.02562 * 25 21 20 47 47 H 1.07997 * 119.99785 * 179.97438 * 26 25 21 48 48 H 1.09005 * 113.60893 * 139.98133 * 27 9 8 49 49 H 1.08996 * 113.61698 * 270.80176 * 27 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2093 -0.0005 5 6 3.5663 1.2749 0.0006 6 6 4.0000 2.7421 -0.0002 7 1 3.4251 3.3531 -0.6961 8 6 4.1149 3.3532 1.4064 9 6 5.3806 4.0693 0.9062 10 1 6.1870 4.0962 1.6392 11 7 5.1152 5.3781 0.3039 12 6 5.4566 6.5041 0.9613 13 8 5.9840 6.4338 2.0512 14 6 5.1893 7.8503 0.3390 15 8 5.6427 8.8805 1.2194 16 6 5.4751 10.1649 0.8050 17 6 5.8884 11.2185 1.6146 18 8 6.4613 10.9660 2.8220 19 6 6.8615 12.0964 3.5992 20 6 5.7208 12.5252 1.1853 21 6 5.1334 12.7802 -0.0399 22 6 4.9457 14.2022 -0.5022 23 8 6.2231 14.8115 -0.6995 24 14 3.9978 14.2137 -2.1061 25 6 4.7176 11.7336 -0.8418 26 6 4.8877 10.4274 -0.4222 27 6 5.5209 2.9348 -0.1224 28 1 -0.3634 0.5139 0.8900 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0277 0.0005 31 1 3.9564 0.7806 -0.8891 32 1 3.9556 0.7810 0.8908 33 1 4.3089 2.6180 2.1873 34 1 3.2990 4.0317 1.6556 35 1 4.6937 5.4344 -0.5679 36 1 5.7202 7.9238 -0.6102 37 1 4.1191 7.9648 0.1665 38 1 7.5960 12.6784 3.0426 39 1 5.9914 12.7175 3.8120 40 1 7.3020 11.7554 4.5361 41 1 6.0447 13.3446 1.8098 42 1 4.3901 14.7592 0.2522 43 1 6.7731 14.3673 -1.3593 44 1 3.8055 15.6105 -2.5723 45 1 4.7295 13.4307 -3.1341 46 1 4.2595 11.9369 -1.7985 47 1 4.5615 9.6117 -1.0503 48 1 5.8400 3.2756 -1.1074 49 1 6.1004 2.0858 0.2401 There are 68 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 68 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_60476.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:11:45 Heat of formation + Delta-G solvation = -160.707873 kcal Electronic energy + Delta-G solvation = -32243.435633 eV Core-core repulsion = 27525.781858 eV Total energy + Delta-G solvation = -4717.653775 eV No. of doubly occupied orbitals = 68 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 366.165 amu Computer time = 0.86 seconds Orbital eigenvalues (eV) -41.87367 -41.65123 -41.01532 -39.83074 -38.99033 -38.76179 -37.41673 -36.97838 -34.72913 -32.16710 -31.72098 -31.39199 -29.52060 -28.48314 -28.31350 -26.84218 -26.22760 -24.76618 -23.56082 -22.57576 -21.89315 -21.85227 -20.34118 -19.75947 -18.65192 -18.50884 -18.36687 -17.96117 -17.67035 -17.52526 -17.49496 -17.12612 -16.88284 -16.59147 -16.14633 -15.97430 -15.80397 -15.73317 -15.58855 -15.21004 -15.07552 -14.78322 -14.65315 -14.28645 -14.12815 -13.80215 -13.72924 -13.51428 -13.46922 -13.43437 -13.03167 -12.82960 -12.62444 -12.54513 -12.23719 -12.16366 -12.11960 -11.98830 -11.80222 -11.73212 -11.62756 -11.39426 -11.35719 -10.86307 -10.61928 -10.14416 -9.77445 -8.84635 -4.97817 0.18706 0.31078 1.20940 1.26231 1.43743 1.51168 1.56981 1.71046 1.94031 2.33254 2.53402 2.57605 3.29985 3.33319 3.34889 3.46794 3.61967 3.63378 3.70161 3.78225 3.80267 3.82703 3.94577 3.95729 4.13419 4.14493 4.20788 4.24574 4.27093 4.29739 4.30354 4.35117 4.39095 4.53805 4.56048 4.57880 4.60009 4.62024 4.66411 4.73249 4.93990 4.99401 5.01251 5.06622 5.11545 5.38021 5.40418 5.48456 5.57019 5.97940 6.34215 6.38479 6.56146 6.73994 7.12786 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.459 3.541 4 O -0.505 6.505 5 C -0.106 4.106 6 C -0.103 4.103 7 H 0.102 0.898 8 C -0.147 4.147 9 C 0.122 3.878 10 H 0.108 0.892 11 N -0.711 5.711 12 C 0.519 3.481 13 O -0.507 6.507 14 C 0.039 3.961 15 O -0.276 6.276 16 C 0.105 3.895 17 C 0.107 3.893 18 O -0.302 6.302 19 C 0.025 3.975 20 C -0.146 4.146 21 C -0.113 4.113 22 C -0.073 4.073 23 O -0.530 6.530 24 Si 0.688 3.312 25 C -0.115 4.115 26 C -0.170 4.170 27 C -0.139 4.139 28 H 0.063 0.937 29 H 0.063 0.937 30 H 0.102 0.898 31 H 0.110 0.890 32 H 0.109 0.891 33 H 0.093 0.907 34 H 0.076 0.924 35 H 0.403 0.597 36 H 0.094 0.906 37 H 0.096 0.904 38 H 0.056 0.944 39 H 0.056 0.944 40 H 0.103 0.897 41 H 0.140 0.860 42 H 0.118 0.882 43 H 0.376 0.624 44 H -0.257 1.257 45 H -0.260 1.260 46 H 0.133 0.867 47 H 0.139 0.861 48 H 0.079 0.921 49 H 0.102 0.898 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.288 -3.736 -4.257 6.109 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.393 6.393 5 C -0.143 4.143 6 C -0.121 4.121 7 H 0.120 0.880 8 C -0.185 4.185 9 C 0.017 3.983 10 H 0.126 0.874 11 N -0.365 5.365 12 C 0.304 3.696 13 O -0.380 6.380 14 C -0.040 4.040 15 O -0.189 6.189 16 C 0.059 3.941 17 C 0.061 3.939 18 O -0.215 6.215 19 C -0.070 4.070 20 C -0.165 4.165 21 C -0.114 4.114 22 C -0.182 4.182 23 O -0.336 6.336 24 Si 0.589 3.411 25 C -0.132 4.132 26 C -0.188 4.188 27 C -0.177 4.177 28 H 0.082 0.918 29 H 0.082 0.918 30 H 0.121 0.879 31 H 0.128 0.872 32 H 0.128 0.872 33 H 0.112 0.888 34 H 0.095 0.905 35 H 0.237 0.763 36 H 0.112 0.888 37 H 0.114 0.886 38 H 0.075 0.925 39 H 0.075 0.925 40 H 0.121 0.879 41 H 0.158 0.842 42 H 0.136 0.864 43 H 0.224 0.776 44 H -0.183 1.183 45 H -0.185 1.185 46 H 0.150 0.850 47 H 0.157 0.843 48 H 0.097 0.903 49 H 0.120 0.880 Dipole moment (debyes) X Y Z Total from point charges -2.214 -3.100 -3.544 5.203 hybrid contribution 0.561 0.170 -0.738 0.943 sum -1.652 -2.930 -4.282 5.445 Atomic orbital electron populations 1.23299 0.75952 1.03951 1.02672 1.86510 1.23785 1.33561 1.84039 1.23847 0.92330 0.81370 0.72287 1.90684 1.67271 1.36331 1.44971 1.21451 0.87531 0.99120 1.06198 1.22539 0.96287 0.94025 0.99264 0.87953 1.23532 0.98501 1.00110 0.96395 1.21805 0.98792 0.81185 0.96541 0.87406 1.45461 1.63583 1.04787 1.22632 1.20013 0.78722 0.85084 0.85827 1.90798 1.40474 1.86893 1.19843 1.22475 1.01559 0.86119 0.93879 1.86276 1.78039 1.11159 1.43414 1.18287 0.99819 0.82904 0.93065 1.18278 0.97780 0.91152 0.86678 1.86253 1.74241 1.34032 1.26935 1.23131 0.99745 0.88639 0.95511 1.20941 1.03275 0.94395 0.97867 1.19968 1.00886 0.95632 0.94912 1.25008 0.90487 0.91471 1.11276 1.86600 1.27286 1.56431 1.63329 0.94920 0.88837 0.81735 0.75591 1.20735 1.00988 0.91699 0.99820 1.20994 1.04138 0.98257 0.95456 1.23408 0.95634 0.98553 1.00074 0.91777 0.91795 0.87911 0.87234 0.87238 0.88826 0.90494 0.76253 0.88772 0.88645 0.92534 0.92510 0.87867 0.84204 0.86426 0.77621 1.18254 1.18473 0.85010 0.84306 0.90255 0.88007 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.28 10.57 -39.26 -0.41 -0.69 16 3 C 0.46 0.34 7.96 36.01 0.29 0.62 16 4 O -0.51 -1.81 15.51 -18.75 -0.29 -2.10 16 5 C -0.11 0.29 5.65 -27.89 -0.16 0.13 16 6 C -0.10 0.26 3.02 -89.81 -0.27 -0.01 16 7 H 0.10 -0.19 7.68 -51.93 -0.40 -0.59 16 8 C -0.15 0.15 7.43 -25.91 -0.19 -0.04 16 9 C 0.12 -0.14 4.32 -67.11 -0.29 -0.43 16 10 H 0.11 0.08 7.46 -51.93 -0.39 -0.31 16 11 N -0.71 0.96 5.26 -53.01 -0.28 0.68 16 12 C 0.52 1.01 7.91 -10.98 -0.09 0.92 16 13 O -0.51 -3.61 16.10 -14.36 -0.23 -3.85 16 14 C 0.04 -0.01 5.22 36.01 0.19 0.18 16 15 O -0.28 -1.15 9.45 -47.35 -0.45 -1.60 16 16 C 0.11 0.31 6.70 -39.12 -0.26 0.04 16 17 C 0.11 0.38 6.70 -39.12 -0.26 0.12 16 18 O -0.30 -1.38 10.28 -34.25 -0.35 -1.73 16 19 C 0.02 0.01 9.81 101.05 0.99 1.00 16 20 C -0.15 -0.24 8.67 -39.46 -0.34 -0.58 16 21 C -0.11 -0.06 5.35 -104.62 -0.56 -0.62 16 22 C -0.07 0.02 2.80 36.00 0.10 0.12 16 23 O -0.53 -0.64 12.83 -35.23 -0.45 -1.09 16 24 Si 0.69 -0.83 29.88 -169.99 -5.08 -5.90 16 25 C -0.11 0.04 8.66 -39.57 -0.34 -0.30 16 26 C -0.17 0.01 9.04 -39.46 -0.36 -0.35 16 27 C -0.14 0.50 7.39 -25.91 -0.19 0.31 16 28 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 29 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 30 H 0.10 -0.33 8.14 -51.93 -0.42 -0.75 16 31 H 0.11 -0.48 8.14 -51.93 -0.42 -0.91 16 32 H 0.11 -0.44 7.85 -51.93 -0.41 -0.85 16 33 H 0.09 -0.16 7.90 -51.93 -0.41 -0.57 16 34 H 0.08 0.07 8.14 -51.92 -0.42 -0.35 16 35 H 0.40 -1.75 8.70 -40.82 -0.36 -2.11 16 36 H 0.09 -0.30 7.66 -51.92 -0.40 -0.70 16 37 H 0.10 -0.29 7.66 -51.93 -0.40 -0.68 16 38 H 0.06 -0.03 7.65 -51.93 -0.40 -0.42 16 39 H 0.06 -0.04 7.68 -51.93 -0.40 -0.44 16 40 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 41 H 0.14 0.09 6.30 -52.49 -0.33 -0.25 16 42 H 0.12 -0.11 7.96 -51.93 -0.41 -0.53 16 43 H 0.38 -0.58 8.70 45.56 0.40 -0.18 16 44 H -0.26 -0.56 7.11 56.52 0.40 -0.16 16 45 H -0.26 -0.12 7.01 56.52 0.40 0.28 16 46 H 0.13 -0.31 4.83 -52.49 -0.25 -0.57 16 47 H 0.14 -0.43 6.30 -52.49 -0.33 -0.76 16 48 H 0.08 -0.34 8.14 -51.93 -0.42 -0.76 16 49 H 0.10 -0.46 8.10 -51.93 -0.42 -0.88 16 LS Contribution 410.60 15.07 6.19 6.19 Total: 0.00 -12.79 410.60 -9.11 -21.89 By element: Atomic # 1 Polarization: -6.89 SS G_CDS: -7.07 Total: -13.96 kcal Atomic # 6 Polarization: 2.84 SS G_CDS: -0.68 Total: 2.15 kcal Atomic # 7 Polarization: 0.96 SS G_CDS: -0.28 Total: 0.68 kcal Atomic # 8 Polarization: -8.87 SS G_CDS: -2.19 Total: -11.06 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.08 Total: -5.90 kcal Total LS contribution 6.19 Total: 6.19 kcal Total: -12.79 -9.11 -21.89 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_60476.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -138.813 kcal (2) G-P(sol) polarization free energy of solvation -12.789 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -151.602 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.106 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.895 kcal (6) G-S(sol) free energy of system = (1) + (5) -160.708 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.86 seconds