Wall clock time and date at job start Tue Mar 9 2021 13:12:20 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45193 * 1 3 3 C 1.34231 * 117.00126 * 2 1 4 4 O 1.20833 * 119.99644 * 0.02562 * 3 2 1 5 5 C 1.50696 * 120.00640 * 179.71955 * 3 2 1 6 6 C 1.52996 * 109.47298 * 180.27355 * 5 3 2 7 7 H 1.08997 * 112.84579 * 43.81252 * 6 5 3 8 8 C 1.53785 * 113.61286 * 174.99945 * 6 5 3 9 9 C 1.53788 * 87.08050 * 139.98379 * 8 6 5 10 10 H 1.08992 * 113.61610 * 220.02327 * 9 8 6 11 11 N 1.46502 * 113.60942 * 89.11439 * 9 8 6 12 12 C 1.34780 * 119.99700 * 155.00015 * 11 9 8 13 13 O 1.21285 * 119.99670 * 0.02562 * 12 11 9 14 14 C 1.50693 * 120.00040 * 179.97438 * 12 11 9 15 15 N 1.46503 * 109.46999 * 180.02562 * 14 12 11 16 16 C 1.36835 * 125.06341 * 265.02273 * 15 14 12 17 17 C 1.34231 * 109.93677 * 179.97438 * 16 15 14 18 18 C 1.50701 * 126.49911 * 179.97438 * 17 16 15 19 19 O 1.42903 * 109.47130 * 105.02678 * 18 17 16 20 20 Si 1.86299 * 109.47339 * 345.02996 * 18 17 16 21 21 C 1.46493 * 107.00257 * 0.02562 * 17 16 15 22 22 C 1.39591 * 134.03808 * 180.02562 * 21 17 16 23 23 C 1.36662 * 119.75903 * 179.97438 * 22 21 17 24 24 C 1.38786 * 120.53185 * 0.02562 * 23 22 21 25 25 C 1.37783 * 120.66915 * 0.02562 * 24 23 22 26 26 C 1.37688 * 125.06130 * 84.72182 * 15 14 12 27 27 C 1.53781 * 113.61738 * 272.49877 * 6 5 3 28 28 H 1.09007 * 109.46891 * 179.97438 * 1 2 3 29 29 H 1.08997 * 109.47488 * 299.99586 * 1 2 3 30 30 H 1.08997 * 109.47515 * 60.00401 * 1 2 3 31 31 H 1.09000 * 109.47190 * 300.28291 * 5 3 2 32 32 H 1.09006 * 109.46468 * 60.27874 * 5 3 2 33 33 H 1.08997 * 113.61684 * 254.53679 * 8 6 5 34 34 H 1.09009 * 113.61434 * 25.44111 * 8 6 5 35 35 H 0.96998 * 120.00462 * 335.00886 * 11 9 8 36 36 H 1.08998 * 109.47338 * 300.00067 * 14 12 11 37 37 H 1.09001 * 109.46752 * 60.00693 * 14 12 11 38 38 H 1.08002 * 125.03204 * 359.97310 * 16 15 14 39 39 H 1.09004 * 109.47156 * 225.02773 * 18 17 16 40 40 H 0.96692 * 114.00352 * 300.00730 * 19 18 17 41 41 H 1.48500 * 110.00172 * 58.67774 * 20 18 17 42 42 H 1.48498 * 110.00132 * 179.97438 * 20 18 17 43 43 H 1.07994 * 120.12051 * 359.97438 * 22 21 17 44 44 H 1.07997 * 119.73445 * 180.02562 * 23 22 21 45 45 H 1.08004 * 119.66551 * 180.02562 * 24 23 22 46 46 H 1.08002 * 120.11744 * 180.02562 * 25 24 23 47 47 H 1.08995 * 113.61698 * 334.56842 * 27 6 5 48 48 H 1.08995 * 113.61197 * 105.47474 * 27 6 5 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4032 2.2094 0.0005 5 6 3.5662 1.2750 0.0064 6 6 3.9999 2.7422 0.0119 7 1 3.4219 3.3517 0.7065 8 6 5.5202 2.9347 0.1415 9 6 5.3849 4.0697 -0.8874 10 1 6.1938 4.0961 -1.6173 11 7 5.1167 5.3782 -0.2856 12 6 5.4614 6.5046 -0.9406 13 8 5.9931 6.4348 -2.0285 14 6 5.1850 7.8506 -0.3220 15 7 5.6490 8.9073 -1.2244 16 6 6.8698 9.5214 -1.1538 17 6 6.9765 10.4410 -2.1258 18 6 8.1623 11.3327 -2.3899 19 8 8.8675 10.8595 -3.5392 20 14 9.2970 11.3109 -0.9126 21 6 5.7212 10.4142 -2.8804 22 6 5.2362 11.1206 -3.9824 23 6 3.9851 10.8528 -4.4627 24 6 3.1922 9.8842 -3.8634 25 6 3.6506 9.1758 -2.7742 26 6 4.9239 9.4264 -2.2734 27 6 4.1214 3.3540 -1.3937 28 1 -0.3633 -1.0277 -0.0005 29 1 -0.3634 0.5137 0.8900 30 1 -0.3634 0.5137 -0.8900 31 1 3.9524 0.7785 0.8966 32 1 3.9596 0.7832 -0.8834 33 1 5.8347 3.2748 1.1281 34 1 6.1002 2.0852 -0.2194 35 1 4.6913 5.4340 0.5843 36 1 4.1136 7.9606 -0.1548 37 1 5.7112 7.9279 0.6295 38 1 7.6343 9.2991 -0.4240 39 1 7.8181 12.3514 -2.5687 40 1 9.2032 9.9571 -3.4507 41 1 9.7479 9.9227 -0.6389 42 1 10.4708 12.1860 -1.1607 43 1 5.8474 11.8760 -4.4536 44 1 3.6104 11.3993 -5.3156 45 1 2.2057 9.6836 -4.2548 46 1 3.0262 8.4237 -2.3149 47 1 4.3190 2.6193 -2.1742 48 1 3.3068 4.0327 -1.6463 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16627170_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:12:20 Heat of formation + Delta-G solvation = -53.363929 kcal Electronic energy + Delta-G solvation = -31530.886944 eV Core-core repulsion = 27133.374144 eV Total energy + Delta-G solvation = -4397.512800 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.161 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -42.48331 -41.77657 -41.02170 -39.49618 -38.00159 -37.57720 -37.42881 -34.83802 -33.98927 -31.89657 -31.17168 -30.10517 -29.01877 -28.40071 -26.91233 -25.87508 -24.67511 -23.60960 -22.72454 -21.94208 -21.86830 -20.58051 -20.38409 -18.76674 -18.57331 -18.46004 -17.72677 -17.68306 -17.54239 -17.31247 -16.81853 -16.36247 -16.28506 -16.01622 -15.81950 -15.55667 -15.29451 -15.12366 -14.90548 -14.66856 -14.56695 -14.36638 -14.15802 -13.98608 -13.91882 -13.54533 -13.51427 -13.27974 -13.06769 -12.86727 -12.58776 -12.43104 -12.29511 -12.25264 -11.86449 -11.84433 -11.79316 -11.61178 -11.44797 -11.42193 -11.11491 -10.40796 -10.33171 -10.23226 -9.00539 -8.51525 -4.89974 0.29771 0.81635 1.16675 1.36657 1.38027 1.43998 1.63897 1.66949 1.73215 2.03504 2.10287 3.13148 3.23577 3.26802 3.44178 3.49241 3.55732 3.61013 3.67284 3.75238 3.78121 3.83297 3.88021 4.09763 4.11255 4.16943 4.19485 4.24117 4.33559 4.33698 4.39847 4.50758 4.53298 4.57322 4.60751 4.65063 4.74326 4.82585 4.87189 4.91912 4.92608 4.99434 5.01580 5.27838 5.36166 5.41377 5.66979 5.83047 5.88514 5.91983 6.15632 6.32529 6.38461 6.62811 6.69810 6.99853 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.035 3.965 2 O -0.362 6.362 3 C 0.459 3.541 4 O -0.506 6.506 5 C -0.106 4.106 6 C -0.102 4.102 7 H 0.102 0.898 8 C -0.139 4.139 9 C 0.120 3.880 10 H 0.106 0.894 11 N -0.711 5.711 12 C 0.493 3.507 13 O -0.513 6.513 14 C 0.091 3.909 15 N -0.465 5.465 16 C 0.066 3.934 17 C -0.193 4.193 18 C -0.037 4.037 19 O -0.531 6.531 20 Si 0.683 3.317 21 C -0.086 4.086 22 C -0.065 4.065 23 C -0.146 4.146 24 C -0.096 4.096 25 C -0.128 4.128 26 C 0.109 3.891 27 C -0.146 4.146 28 H 0.103 0.897 29 H 0.063 0.937 30 H 0.063 0.937 31 H 0.110 0.890 32 H 0.109 0.891 33 H 0.079 0.921 34 H 0.101 0.899 35 H 0.403 0.597 36 H 0.119 0.881 37 H 0.124 0.876 38 H 0.168 0.832 39 H 0.114 0.886 40 H 0.374 0.626 41 H -0.261 1.261 42 H -0.257 1.257 43 H 0.123 0.877 44 H 0.123 0.877 45 H 0.125 0.875 46 H 0.114 0.886 47 H 0.092 0.908 48 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.908 -3.950 7.024 8.281 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.059 4.059 2 O -0.279 6.279 3 C 0.302 3.698 4 O -0.393 6.393 5 C -0.143 4.143 6 C -0.120 4.120 7 H 0.120 0.880 8 C -0.177 4.177 9 C 0.015 3.985 10 H 0.124 0.876 11 N -0.364 5.364 12 C 0.277 3.723 13 O -0.386 6.386 14 C -0.035 4.035 15 N -0.149 5.149 16 C -0.059 4.059 17 C -0.201 4.201 18 C -0.147 4.147 19 O -0.337 6.337 20 Si 0.584 3.416 21 C -0.090 4.090 22 C -0.083 4.083 23 C -0.165 4.165 24 C -0.116 4.116 25 C -0.148 4.148 26 C 0.005 3.995 27 C -0.185 4.185 28 H 0.121 0.879 29 H 0.082 0.918 30 H 0.082 0.918 31 H 0.128 0.872 32 H 0.127 0.873 33 H 0.097 0.903 34 H 0.119 0.881 35 H 0.238 0.762 36 H 0.137 0.863 37 H 0.142 0.858 38 H 0.186 0.814 39 H 0.132 0.868 40 H 0.222 0.778 41 H -0.186 1.186 42 H -0.181 1.181 43 H 0.141 0.859 44 H 0.141 0.859 45 H 0.143 0.857 46 H 0.132 0.868 47 H 0.111 0.889 48 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges -1.169 -3.517 6.520 7.500 hybrid contribution -0.395 -1.122 -0.359 1.243 sum -1.564 -4.639 6.160 7.869 Atomic orbital electron populations 1.23302 0.75909 1.03986 1.02677 1.86509 1.23815 1.33521 1.84013 1.23832 0.92308 0.81388 0.72287 1.90684 1.67273 1.36338 1.44997 1.21452 0.87591 0.99087 1.06206 1.22528 0.96263 0.94060 0.99176 0.87953 1.23405 0.95685 0.98546 1.00028 1.21806 0.98737 0.81467 0.96491 0.87635 1.45615 1.62917 1.05007 1.22821 1.21043 0.78884 0.86144 0.86182 1.90814 1.40930 1.86927 1.19946 1.21590 1.03735 0.84565 0.93589 1.43206 1.13796 1.31447 1.26429 1.21577 0.87800 0.95657 1.00829 1.20581 0.96715 1.03451 0.99345 1.24292 0.94199 0.98928 0.97316 1.86592 1.73695 1.35118 1.38259 0.95344 0.81331 0.81707 0.83237 1.18936 0.93761 0.98570 0.97761 1.20305 0.95343 0.98500 0.94202 1.20671 0.94727 0.99775 1.01304 1.20826 0.99742 0.95881 0.95106 1.19965 0.93216 1.02536 0.99113 1.18170 0.94176 0.96654 0.90507 1.23513 0.98437 1.00091 0.96424 0.87878 0.91777 0.91778 0.87204 0.87268 0.90254 0.88072 0.76231 0.86293 0.85809 0.81449 0.86831 0.77838 1.18613 1.18137 0.85911 0.85932 0.85746 0.86753 0.88905 0.90596 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.23 10.57 -39.26 -0.41 -0.65 16 3 C 0.46 0.27 7.96 36.00 0.29 0.56 16 4 O -0.51 -1.73 15.51 -18.76 -0.29 -2.02 16 5 C -0.11 0.31 5.65 -27.89 -0.16 0.15 16 6 C -0.10 0.29 3.03 -89.81 -0.27 0.02 16 7 H 0.10 -0.22 7.68 -51.93 -0.40 -0.61 16 8 C -0.14 0.55 7.39 -25.91 -0.19 0.36 16 9 C 0.12 -0.19 4.32 -67.11 -0.29 -0.48 16 10 H 0.11 0.05 7.47 -51.93 -0.39 -0.34 16 11 N -0.71 1.65 5.26 -53.01 -0.28 1.37 16 12 C 0.49 0.18 7.90 -10.99 -0.09 0.10 16 13 O -0.51 -2.83 16.02 5.55 0.09 -2.74 16 14 C 0.09 -0.20 6.48 -5.20 -0.03 -0.23 16 15 N -0.47 -0.70 2.27 -115.71 -0.26 -0.97 16 16 C 0.07 0.08 9.89 -16.73 -0.17 -0.09 16 17 C -0.19 -0.51 5.58 -102.71 -0.57 -1.08 16 18 C -0.04 -0.06 3.06 36.01 0.11 0.05 16 19 O -0.53 -1.85 12.88 -35.23 -0.45 -2.31 16 20 Si 0.68 -0.21 30.82 -169.99 -5.24 -5.45 16 21 C -0.09 -0.38 6.35 -105.14 -0.67 -1.05 16 22 C -0.06 -0.25 10.05 -39.65 -0.40 -0.65 16 23 C -0.15 -0.43 9.97 -39.95 -0.40 -0.83 16 24 C -0.10 -0.26 10.01 -39.55 -0.40 -0.65 16 25 C -0.13 -0.39 10.00 -39.43 -0.39 -0.78 16 26 C 0.11 0.41 6.80 -83.99 -0.57 -0.16 16 27 C -0.15 0.19 7.43 -25.92 -0.19 0.00 16 28 H 0.10 -0.34 8.14 -51.93 -0.42 -0.76 16 29 H 0.06 -0.07 8.13 -51.93 -0.42 -0.49 16 30 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.11 -0.50 8.14 -51.93 -0.42 -0.92 16 32 H 0.11 -0.45 7.84 -51.93 -0.41 -0.86 16 33 H 0.08 -0.37 8.14 -51.93 -0.42 -0.79 16 34 H 0.10 -0.48 8.10 -51.92 -0.42 -0.90 16 35 H 0.40 -2.08 8.70 -40.82 -0.36 -2.43 16 36 H 0.12 -0.49 8.14 -51.93 -0.42 -0.91 16 37 H 0.12 -0.70 8.12 -51.93 -0.42 -1.12 16 38 H 0.17 -0.26 6.27 -52.49 -0.33 -0.59 16 39 H 0.11 0.12 7.96 -51.93 -0.41 -0.29 16 40 H 0.37 0.40 8.70 45.56 0.40 0.80 16 41 H -0.26 -0.32 7.00 56.52 0.40 0.08 16 42 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 43 H 0.12 0.36 8.06 -52.49 -0.42 -0.07 16 44 H 0.12 0.12 8.06 -52.49 -0.42 -0.30 16 45 H 0.12 0.07 8.06 -52.48 -0.42 -0.36 16 46 H 0.11 0.15 8.06 -52.49 -0.42 -0.27 16 47 H 0.09 -0.17 7.90 -51.93 -0.41 -0.58 16 48 H 0.08 0.05 8.14 -51.93 -0.42 -0.37 16 LS Contribution 407.77 15.07 6.15 6.15 Total: 0.00 -12.28 407.77 -11.03 -23.31 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -7.00 Total: -12.94 kcal Atomic # 6 Polarization: -0.42 SS G_CDS: -3.32 Total: -3.74 kcal Atomic # 7 Polarization: 0.94 SS G_CDS: -0.54 Total: 0.40 kcal Atomic # 8 Polarization: -6.65 SS G_CDS: -1.07 Total: -7.72 kcal Atomic # 14 Polarization: -0.21 SS G_CDS: -5.24 Total: -5.45 kcal Total LS contribution 6.15 Total: 6.15 kcal Total: -12.28 -11.03 -23.31 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16627170_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -30.058 kcal (2) G-P(sol) polarization free energy of solvation -12.275 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -42.333 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.031 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.306 kcal (6) G-S(sol) free energy of system = (1) + (5) -53.364 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds