Wall clock time and date at job start Tue Mar 9 2021 13:20:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42904 * 1 3 3 C 1.35992 * 116.99956 * 2 1 4 4 C 1.39152 * 120.07406 * 179.97438 * 3 2 1 5 5 O 1.35990 * 120.07342 * 0.02562 * 4 3 2 6 6 C 1.42905 * 117.00366 * 179.97438 * 5 4 3 7 7 C 1.50692 * 109.47280 * 179.97438 * 6 5 4 8 8 O 1.21287 * 120.00562 * 0.02562 * 7 6 5 9 9 N 1.34782 * 120.00156 * 179.97438 * 7 6 5 10 10 C 1.46497 * 120.00257 * 180.02562 * 9 7 6 11 11 H 1.09007 * 109.47104 * 324.99999 * 10 9 7 12 12 C 1.53001 * 109.47224 * 85.00153 * 10 9 7 13 13 C 1.53006 * 109.47149 * 180.02562 * 12 10 9 14 14 C 1.53003 * 109.46825 * 299.99807 * 13 12 10 15 15 H 1.08993 * 109.47345 * 300.00089 * 14 13 12 16 16 C 1.47195 * 109.47120 * 179.97438 * 14 13 12 17 17 N 9.14928 * 127.30089 * 6.58872 * 6 1 2 18 18 C 1.53001 * 109.47100 * 60.00163 * 14 13 12 19 19 C 1.52998 * 109.47279 * 205.00231 * 10 9 7 20 20 C 1.38567 * 119.85406 * 179.97438 * 4 3 2 21 21 C 1.38233 * 120.00003 * 0.02562 * 20 4 3 22 22 C 1.38250 * 120.14989 * 0.02562 * 21 20 4 23 23 C 1.50700 * 119.93098 * 179.97438 * 22 21 20 24 24 O 1.42903 * 109.46801 * 244.97803 * 23 22 21 25 25 Si 1.86295 * 109.47088 * 4.97471 * 23 22 21 26 26 C 1.38245 * 120.14567 * 359.95995 * 22 21 20 27 27 H 1.09004 * 109.46727 * 180.02562 * 1 2 3 28 28 H 1.09001 * 109.46790 * 299.99120 * 1 2 3 29 29 H 1.08998 * 109.47193 * 59.99618 * 1 2 3 30 30 H 1.08993 * 109.47197 * 300.00462 * 6 5 4 31 31 H 1.09003 * 109.46655 * 59.99892 * 6 5 4 32 32 H 0.96996 * 119.99561 * 0.02562 * 9 7 6 33 33 H 1.09005 * 109.47107 * 299.99582 * 12 10 9 34 34 H 1.08993 * 109.47081 * 60.00101 * 12 10 9 35 35 H 1.08997 * 109.47048 * 180.02562 * 13 12 10 36 36 H 1.08999 * 109.47135 * 59.99506 * 13 12 10 37 37 H 1.09000 * 109.47045 * 179.97438 * 18 14 13 38 38 H 1.08999 * 109.47505 * 59.99906 * 18 14 13 39 39 H 1.09007 * 109.46863 * 299.99916 * 19 10 9 40 40 H 1.08999 * 109.47126 * 59.99539 * 19 10 9 41 41 H 1.08000 * 119.99832 * 179.97438 * 20 4 3 42 42 H 1.08007 * 119.92682 * 180.02562 * 21 20 4 43 43 H 1.08995 * 109.47556 * 124.97722 * 23 22 21 44 44 H 0.96706 * 114.00056 * 60.00125 * 24 23 22 45 45 H 1.48497 * 110.00119 * 180.02562 * 25 23 22 46 46 H 1.48502 * 110.00261 * 301.32374 * 25 23 22 47 47 H 1.07995 * 120.00146 * 179.74376 * 26 22 21 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2117 0.0000 4 6 3.4359 1.2863 0.0005 5 8 4.1795 0.1477 0.0005 6 6 5.6004 0.3007 0.0005 7 6 6.2519 -1.0581 0.0012 8 8 5.5671 -2.0591 0.0011 9 7 7.5958 -1.1611 0.0008 10 6 8.2292 -2.4821 0.0008 11 1 7.6274 -3.1736 0.5906 12 6 8.3359 -2.9966 -1.4361 13 6 8.9969 -4.3765 -1.4360 14 6 10.3964 -4.2715 -0.8266 15 1 10.9985 -3.5803 -1.4162 16 6 11.0321 -5.5991 -0.8259 17 7 11.5245 -6.6200 -0.8470 18 6 10.2897 -3.7570 0.6103 19 6 9.6287 -2.3766 0.6100 20 6 4.0603 2.5234 0.0000 21 6 3.3029 3.6798 -0.0005 22 6 1.9224 3.6058 0.0000 23 6 1.1016 4.8696 0.0000 24 8 0.3647 4.9589 1.2211 25 14 2.2308 6.3434 -0.1531 26 6 1.2932 2.3748 0.0002 27 1 -0.3633 -1.0277 0.0005 28 1 -0.3633 0.5137 0.8901 29 1 -0.3633 0.5139 -0.8899 30 1 5.9066 0.8505 -0.8893 31 1 5.9065 0.8505 0.8906 32 1 8.1435 -0.3606 0.0004 33 1 7.3388 -3.0718 -1.8701 34 1 8.9377 -2.3052 -2.0258 35 1 9.0733 -4.7428 -2.4597 36 1 8.3948 -5.0677 -0.8463 37 1 11.2866 -3.6827 1.0446 38 1 9.6875 -4.4482 1.2000 39 1 10.2305 -1.6851 0.0202 40 1 9.5527 -2.0100 1.6337 41 1 5.1386 2.5840 0.0008 42 1 3.7908 4.6434 -0.0014 43 1 0.4093 4.8533 -0.8417 44 1 0.9181 4.9781 2.0140 45 1 1.4336 7.5962 -0.1537 46 1 3.2004 6.3594 0.9716 47 1 0.2146 2.3197 0.0048 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16662488_60476.mol2 47 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:20:49 Heat of formation + Delta-G solvation = -85.340883 kcal Electronic energy + Delta-G solvation = -29617.515310 eV Core-core repulsion = 25346.842026 eV Total energy + Delta-G solvation = -4270.673284 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.161 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -41.82698 -41.18427 -39.93547 -39.09707 -38.87984 -37.30198 -36.98772 -35.26664 -32.22299 -32.09715 -31.61576 -31.25136 -29.18067 -28.41042 -26.25299 -24.67759 -24.04649 -23.43847 -22.52982 -21.63845 -21.31572 -19.79651 -18.85398 -18.67477 -18.36422 -17.99463 -17.53883 -17.28547 -17.07976 -16.63398 -16.18327 -16.16453 -15.88729 -15.80920 -15.60918 -15.43719 -15.23169 -14.87161 -14.74367 -14.53788 -14.31535 -13.95167 -13.80962 -13.73222 -13.58633 -13.51037 -13.48838 -13.11848 -12.66351 -12.57238 -12.46301 -12.38287 -12.37369 -12.19501 -12.14353 -12.01687 -11.71056 -11.65247 -11.48511 -10.86799 -10.64280 -10.21091 -9.80425 -8.87525 -5.00425 0.15747 0.28187 1.23906 1.40614 1.48701 1.54579 1.78788 1.82489 1.92180 2.30473 2.47818 2.54693 2.84807 3.32493 3.37033 3.46058 3.48070 3.60864 3.74090 3.76482 3.78045 3.87614 3.92149 3.93031 3.97915 4.10786 4.11955 4.16894 4.22030 4.24338 4.28011 4.32371 4.43228 4.51449 4.55054 4.55876 4.64219 4.77706 4.80548 4.87639 4.93788 4.98391 5.06629 5.08482 5.12819 5.32638 5.35357 5.53760 5.94701 6.29908 6.36191 6.53181 6.58901 7.08951 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.025 3.975 2 O -0.301 6.301 3 C 0.107 3.893 4 C 0.105 3.895 5 O -0.277 6.277 6 C 0.038 3.962 7 C 0.516 3.484 8 O -0.507 6.507 9 N -0.726 5.726 10 C 0.143 3.857 11 H 0.094 0.906 12 C -0.129 4.129 13 C -0.110 4.110 14 C 0.007 3.993 15 H 0.117 0.883 16 C 0.206 3.794 17 N -0.430 5.430 18 C -0.109 4.109 19 C -0.124 4.124 20 C -0.170 4.170 21 C -0.115 4.115 22 C -0.113 4.113 23 C -0.073 4.073 24 O -0.530 6.530 25 Si 0.688 3.312 26 C -0.146 4.146 27 H 0.103 0.897 28 H 0.056 0.944 29 H 0.056 0.944 30 H 0.095 0.905 31 H 0.093 0.907 32 H 0.402 0.598 33 H 0.078 0.922 34 H 0.072 0.928 35 H 0.078 0.922 36 H 0.077 0.923 37 H 0.081 0.919 38 H 0.077 0.923 39 H 0.077 0.923 40 H 0.079 0.921 41 H 0.139 0.861 42 H 0.133 0.867 43 H 0.118 0.882 44 H 0.376 0.624 45 H -0.258 1.258 46 H -0.260 1.260 47 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.842 7.331 -1.296 7.968 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.070 4.070 2 O -0.214 6.214 3 C 0.061 3.939 4 C 0.059 3.941 5 O -0.189 6.189 6 C -0.041 4.041 7 C 0.301 3.699 8 O -0.380 6.380 9 N -0.379 5.379 10 C 0.039 3.961 11 H 0.112 0.888 12 C -0.168 4.168 13 C -0.149 4.149 14 C -0.015 4.015 15 H 0.134 0.866 16 C -0.112 4.112 17 N -0.105 5.105 18 C -0.148 4.148 19 C -0.162 4.162 20 C -0.188 4.188 21 C -0.133 4.133 22 C -0.114 4.114 23 C -0.183 4.183 24 O -0.336 6.336 25 Si 0.589 3.411 26 C -0.165 4.165 27 H 0.121 0.879 28 H 0.075 0.925 29 H 0.075 0.925 30 H 0.113 0.887 31 H 0.111 0.889 32 H 0.237 0.763 33 H 0.096 0.904 34 H 0.091 0.909 35 H 0.097 0.903 36 H 0.095 0.905 37 H 0.099 0.901 38 H 0.096 0.904 39 H 0.095 0.905 40 H 0.098 0.902 41 H 0.157 0.843 42 H 0.150 0.850 43 H 0.136 0.864 44 H 0.224 0.776 45 H -0.183 1.183 46 H -0.185 1.185 47 H 0.158 0.842 Dipole moment (debyes) X Y Z Total from point charges 2.852 5.373 -1.366 6.234 hybrid contribution -0.206 0.727 1.106 1.340 sum 2.645 6.100 -0.261 6.654 Atomic orbital electron populations 1.23134 0.78111 1.04418 1.01366 1.86249 1.21335 1.25331 1.88530 1.18284 0.89034 0.85562 1.01019 1.18279 0.88299 0.85777 1.01743 1.86279 1.16061 1.27730 1.88836 1.22491 0.81301 0.96356 1.03973 1.20023 0.82515 0.90529 0.76847 1.90807 1.62607 1.37959 1.46618 1.45864 1.05841 1.09621 1.76609 1.21089 0.93711 0.84261 0.97030 0.88792 1.21932 1.02131 0.96053 0.96638 1.21539 0.93118 0.98140 1.02130 1.18991 0.96616 0.86350 0.99527 0.86559 1.29053 0.93695 0.94873 0.93582 1.81187 1.09176 1.12161 1.07989 1.21523 1.02434 0.96644 0.94213 1.21805 0.94650 0.97513 1.02274 1.20984 1.00442 0.90667 1.06739 1.20734 0.92892 0.98041 1.01597 1.19971 0.93695 0.95085 1.02618 1.25011 1.01683 1.01729 0.89849 1.86604 1.36178 1.95486 1.15372 0.94948 0.79614 0.76431 0.90063 1.20948 1.00379 0.90421 1.04741 0.87866 0.92542 0.92494 0.88703 0.88868 0.76347 0.90373 0.90912 0.90314 0.90472 0.90062 0.90399 0.90470 0.90222 0.84304 0.85009 0.86423 0.77615 1.18268 1.18483 0.84216 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.00 9.81 101.05 0.99 0.99 16 2 O -0.30 -1.17 10.28 -34.22 -0.35 -1.52 16 3 C 0.11 0.30 6.70 -39.12 -0.26 0.04 16 4 C 0.10 0.21 6.70 -39.12 -0.26 -0.05 16 5 O -0.28 -0.84 9.45 -47.33 -0.45 -1.29 16 6 C 0.04 -0.07 5.22 36.00 0.19 0.12 16 7 C 0.52 0.06 7.87 -10.99 -0.09 -0.03 16 8 O -0.51 -2.75 16.16 -14.36 -0.23 -2.98 16 9 N -0.73 2.68 5.08 -53.81 -0.27 2.41 16 10 C 0.14 -0.48 2.45 -67.93 -0.17 -0.64 16 11 H 0.09 -0.09 7.58 -51.93 -0.39 -0.48 16 12 C -0.13 0.43 5.49 -26.73 -0.15 0.28 16 13 C -0.11 0.36 5.16 -26.73 -0.14 0.22 16 14 C 0.01 -0.03 2.57 -93.41 -0.24 -0.26 16 15 H 0.12 -0.67 8.14 -51.93 -0.42 -1.10 16 16 C 0.21 0.09 14.64 -20.84 -0.31 -0.21 16 17 N -0.43 -1.86 18.52 42.06 0.78 -1.08 16 18 C -0.11 0.50 5.16 -26.71 -0.14 0.36 16 19 C -0.12 0.69 5.39 -26.71 -0.14 0.55 16 20 C -0.17 0.17 9.04 -39.46 -0.36 -0.19 16 21 C -0.11 0.13 8.66 -39.58 -0.34 -0.21 16 22 C -0.11 0.02 5.35 -104.62 -0.56 -0.54 16 23 C -0.07 0.06 2.80 36.01 0.10 0.16 16 24 O -0.53 -0.40 12.83 -35.23 -0.45 -0.85 16 25 Si 0.69 -1.20 29.87 -169.99 -5.08 -6.28 16 26 C -0.15 -0.15 8.67 -39.46 -0.34 -0.49 16 27 H 0.10 -0.13 8.14 -51.93 -0.42 -0.56 16 28 H 0.06 -0.05 7.66 -51.93 -0.40 -0.45 16 29 H 0.06 -0.07 7.67 -51.93 -0.40 -0.47 16 30 H 0.10 -0.44 7.66 -51.93 -0.40 -0.84 16 31 H 0.09 -0.42 7.66 -51.93 -0.40 -0.81 16 32 H 0.40 -2.83 8.60 -40.82 -0.35 -3.18 16 33 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 34 H 0.07 -0.34 8.14 -51.93 -0.42 -0.76 16 35 H 0.08 -0.25 8.14 -51.93 -0.42 -0.67 16 36 H 0.08 -0.18 8.14 -51.93 -0.42 -0.60 16 37 H 0.08 -0.39 8.14 -51.93 -0.42 -0.82 16 38 H 0.08 -0.29 8.14 -51.93 -0.42 -0.71 16 39 H 0.08 -0.54 8.14 -51.93 -0.42 -0.96 16 40 H 0.08 -0.44 8.14 -51.93 -0.42 -0.86 16 41 H 0.14 -0.58 6.30 -52.49 -0.33 -0.92 16 42 H 0.13 -0.41 4.83 -52.48 -0.25 -0.66 16 43 H 0.12 -0.17 7.96 -51.93 -0.41 -0.59 16 44 H 0.38 -0.75 8.70 45.56 0.40 -0.35 16 45 H -0.26 -0.45 7.11 56.52 0.40 -0.04 16 46 H -0.26 0.02 7.01 56.52 0.40 0.42 16 47 H 0.14 0.01 6.30 -52.49 -0.33 -0.32 16 LS Contribution 390.34 15.07 5.88 5.88 Total: 0.00 -12.80 390.34 -9.08 -21.88 By element: Atomic # 1 Polarization: -9.54 SS G_CDS: -6.70 Total: -16.24 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -2.21 Total: 0.06 kcal Atomic # 7 Polarization: 0.82 SS G_CDS: 0.51 Total: 1.33 kcal Atomic # 8 Polarization: -5.16 SS G_CDS: -1.48 Total: -6.64 kcal Atomic # 14 Polarization: -1.20 SS G_CDS: -5.08 Total: -6.28 kcal Total LS contribution 5.88 Total: 5.88 kcal Total: -12.80 -9.08 -21.88 kcal The number of atoms in the molecule is 47 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16662488_60476.mol2 47 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -63.457 kcal (2) G-P(sol) polarization free energy of solvation -12.802 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -76.259 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.082 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.884 kcal (6) G-S(sol) free energy of system = (1) + (5) -85.341 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds