Wall clock time and date at job start Tue Mar 9 2021 13:23:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13601 * 1 3 3 C 1.47205 * 179.97438 * 2 1 4 4 C 1.53000 * 109.46934 * 105.37913 * 3 2 1 5 5 H 1.09004 * 112.84628 * 316.18796 * 4 3 2 6 6 C 1.53787 * 113.61275 * 184.99927 * 4 3 2 7 7 C 1.53785 * 87.07712 * 219.93152 * 6 4 3 8 8 H 1.08999 * 113.61428 * 270.79845 * 7 6 4 9 9 N 1.46502 * 113.61217 * 139.98104 * 7 6 4 10 10 C 1.34773 * 119.99942 * 154.99546 * 9 7 6 11 11 O 1.21522 * 119.99978 * 0.02562 * 10 9 7 12 12 C 1.48168 * 120.00123 * 179.97438 * 10 9 7 13 13 C 1.39276 * 119.72235 * 180.02562 * 12 10 9 14 14 C 1.38627 * 119.05771 * 180.02562 * 13 12 10 15 15 C 1.38586 * 118.48941 * 0.02562 * 14 13 12 16 16 C 1.50699 * 120.32372 * 179.97438 * 15 14 13 17 17 O 1.42903 * 109.47152 * 300.00006 * 16 15 14 18 18 Si 1.86293 * 109.47431 * 179.97438 * 16 15 14 19 19 C 1.38600 * 119.35059 * 0.24905 * 15 14 13 20 20 N 1.31488 * 120.90052 * 359.47621 * 19 15 14 21 21 C 1.53776 * 113.69456 * 87.46150 * 4 3 2 22 22 H 1.08992 * 109.47160 * 345.37327 * 3 2 1 23 23 H 1.09006 * 109.46812 * 225.37538 * 3 2 1 24 24 H 1.08995 * 113.61499 * 105.38272 * 6 4 3 25 25 H 1.09000 * 113.61193 * 334.47834 * 6 4 3 26 26 H 0.97000 * 119.99858 * 335.00017 * 9 7 6 27 27 H 1.07991 * 120.46708 * 0.02562 * 13 12 10 28 28 H 1.07999 * 120.75636 * 179.97438 * 14 13 12 29 29 H 1.09008 * 109.47393 * 59.99401 * 16 15 14 30 30 H 0.96700 * 114.00311 * 180.02562 * 17 16 15 31 31 H 1.48506 * 109.99973 * 59.99460 * 18 16 15 32 32 H 1.48493 * 110.00375 * 181.31561 * 18 16 15 33 33 H 1.08002 * 119.54438 * 179.72734 * 19 15 14 34 34 H 1.08999 * 113.61397 * 25.43993 * 21 4 3 35 35 H 1.09005 * 113.61342 * 254.53950 * 21 4 3 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6081 0.0007 0.0000 4 6 3.1178 0.3834 -1.3909 5 1 2.5757 -0.1174 -2.1930 6 6 4.6467 0.2957 -1.5323 7 6 4.5657 1.5905 -2.3581 8 1 4.4209 1.4196 -3.4248 9 7 5.6488 2.5355 -2.0752 10 6 6.0184 3.4356 -3.0078 11 8 5.4530 3.4636 -4.0830 12 6 7.1134 4.3919 -2.7215 13 6 7.4903 5.3199 -3.6892 14 6 8.5169 6.2078 -3.4069 15 6 9.1309 6.1357 -2.1666 16 6 10.2516 7.0803 -1.8164 17 8 11.3278 6.9060 -2.7402 18 14 10.8504 6.7204 -0.0894 19 6 8.7079 5.1826 -1.2536 20 7 7.7280 4.3559 -1.5455 21 6 3.2643 1.8999 -1.5996 22 1 2.9718 -0.9935 0.2595 23 1 2.9710 0.7228 0.7315 24 1 4.9832 -0.5678 -2.1060 25 1 5.1798 0.4122 -0.5887 26 1 6.0999 2.5134 -1.2168 27 1 6.9899 5.3474 -4.6458 28 1 8.8316 6.9384 -4.1373 29 1 9.8907 8.1076 -1.8687 30 1 12.0858 7.4832 -2.5746 31 1 11.3449 5.3227 -0.0043 32 1 11.9342 7.6660 0.2798 33 1 9.1872 5.1207 -0.2877 34 1 3.4196 2.4550 -0.6745 35 1 2.4849 2.3315 -2.2277 There are 49 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 49 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16663504_13287726.mol2 35 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:23:27 Heat of formation + Delta-G solvation = 24.605525 kcal Electronic energy + Delta-G solvation = -19732.051060 eV Core-core repulsion = 16504.696740 eV Total energy + Delta-G solvation = -3227.354320 eV No. of doubly occupied orbitals = 49 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 274.110 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -41.88410 -40.92255 -39.45996 -38.05652 -37.36560 -34.93751 -33.79520 -33.01716 -31.21842 -27.98639 -26.85735 -25.09578 -24.80801 -23.22103 -21.69868 -20.96346 -19.16475 -18.84651 -18.67141 -18.12189 -17.03725 -16.91531 -16.52040 -16.27912 -16.12722 -15.63427 -15.49404 -15.29088 -14.69582 -14.50059 -14.25230 -14.05987 -14.04338 -13.87157 -13.61051 -13.48767 -12.98656 -12.68480 -12.61846 -12.23345 -12.14848 -11.75066 -11.46610 -11.30248 -11.09752 -10.79500 -10.60506 -10.28231 -10.00965 -5.14679 -0.55744 0.07544 1.04752 1.42771 1.62994 1.78951 1.80649 1.88120 2.05503 2.65071 2.90081 2.94762 3.11886 3.32330 3.46793 3.51463 3.64570 3.69697 3.71735 3.75697 3.88681 4.12242 4.18339 4.20016 4.28686 4.44184 4.53587 4.56791 4.65139 4.67902 4.86704 4.89374 4.93502 4.97038 5.16219 5.35816 5.49695 6.21177 6.33782 6.63583 6.65428 7.14859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.435 5.435 2 C 0.203 3.797 3 C -0.015 4.015 4 C -0.106 4.106 5 H 0.104 0.896 6 C -0.137 4.137 7 C 0.120 3.880 8 H 0.119 0.881 9 N -0.700 5.700 10 C 0.575 3.425 11 O -0.529 6.529 12 C 0.078 3.922 13 C -0.108 4.108 14 C -0.052 4.052 15 C -0.103 4.103 16 C -0.076 4.076 17 O -0.535 6.535 18 Si 0.682 3.318 19 C 0.106 3.894 20 N -0.452 5.452 21 C -0.150 4.150 22 H 0.114 0.886 23 H 0.111 0.889 24 H 0.083 0.917 25 H 0.095 0.905 26 H 0.413 0.587 27 H 0.153 0.847 28 H 0.146 0.854 29 H 0.084 0.916 30 H 0.385 0.615 31 H -0.249 1.249 32 H -0.256 1.256 33 H 0.165 0.835 34 H 0.092 0.908 35 H 0.076 0.924 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.411 2.150 3.961 7.042 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.111 5.111 2 C -0.115 4.115 3 C -0.055 4.055 4 C -0.127 4.127 5 H 0.122 0.878 6 C -0.175 4.175 7 C 0.015 3.985 8 H 0.137 0.863 9 N -0.351 5.351 10 C 0.359 3.641 11 O -0.404 6.404 12 C -0.060 4.060 13 C -0.128 4.128 14 C -0.078 4.078 15 C -0.105 4.105 16 C -0.186 4.186 17 O -0.343 6.343 18 Si 0.582 3.418 19 C -0.053 4.053 20 N -0.163 5.163 21 C -0.189 4.189 22 H 0.132 0.868 23 H 0.129 0.871 24 H 0.102 0.898 25 H 0.114 0.886 26 H 0.250 0.750 27 H 0.170 0.830 28 H 0.164 0.836 29 H 0.102 0.898 30 H 0.233 0.767 31 H -0.174 1.174 32 H -0.180 1.180 33 H 0.181 0.819 34 H 0.111 0.889 35 H 0.095 0.905 Dipole moment (debyes) X Y Z Total from point charges 3.257 0.835 4.041 5.257 hybrid contribution 1.875 1.142 -0.984 2.406 sum 5.132 1.977 3.057 6.292 Atomic orbital electron populations 1.81292 1.13160 1.08627 1.08066 1.29201 0.95320 0.93401 0.93582 1.19303 0.81696 1.05537 0.98926 1.22346 0.96527 0.97430 0.96353 0.87823 1.23415 0.95138 0.97790 1.01145 1.22570 0.86249 0.88630 1.01062 0.86320 1.45793 1.36845 1.33939 1.18527 1.17881 0.81783 0.80359 0.84041 1.90820 1.54669 1.70962 1.23964 1.21160 0.96972 0.96833 0.91013 1.22214 0.96210 0.93653 1.00750 1.21530 0.92963 0.97501 0.95830 1.20540 0.96849 0.97273 0.95821 1.24736 0.88743 1.00425 1.04718 1.86576 1.28488 1.66064 1.53137 0.95117 0.87398 0.81321 0.77939 1.22544 0.93402 0.90313 0.99083 1.67515 1.07178 1.22975 1.18618 1.23639 0.98026 0.95627 1.01612 0.86835 0.87121 0.89842 0.88624 0.75038 0.82960 0.83596 0.89769 0.76684 1.17365 1.18036 0.81858 0.88944 0.90532 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.90 18.54 42.15 0.78 -1.12 16 2 C 0.20 0.04 15.42 -20.76 -0.32 -0.28 16 3 C -0.01 0.07 5.54 -29.52 -0.16 -0.09 16 4 C -0.11 0.44 3.61 -89.81 -0.32 0.11 16 5 H 0.10 -0.37 8.12 -51.93 -0.42 -0.79 16 6 C -0.14 0.63 7.39 -25.91 -0.19 0.43 16 7 C 0.12 -0.22 4.24 -67.12 -0.28 -0.50 16 8 H 0.12 -0.02 7.46 -51.93 -0.39 -0.40 16 9 N -0.70 0.52 5.34 -53.86 -0.29 0.23 16 10 C 0.57 1.29 7.81 -12.18 -0.10 1.20 16 11 O -0.53 -2.80 15.92 5.35 0.09 -2.71 16 12 C 0.08 0.12 6.75 -83.01 -0.56 -0.44 16 13 C -0.11 -0.10 9.63 -39.05 -0.38 -0.48 16 14 C -0.05 0.01 9.76 -39.31 -0.38 -0.38 16 15 C -0.10 0.06 5.44 -104.36 -0.57 -0.51 16 16 C -0.08 0.17 2.82 36.01 0.10 0.27 16 17 O -0.53 0.45 12.75 -35.23 -0.45 0.00 16 18 Si 0.68 -2.05 29.82 -169.99 -5.07 -7.12 16 19 C 0.11 -0.06 9.84 -17.57 -0.17 -0.24 16 20 N -0.45 -0.27 9.54 -9.80 -0.09 -0.37 16 21 C -0.15 0.39 7.43 -25.92 -0.19 0.19 16 22 H 0.11 -0.75 8.14 -51.93 -0.42 -1.18 16 23 H 0.11 -0.71 7.85 -51.93 -0.41 -1.12 16 24 H 0.08 -0.38 8.14 -51.93 -0.42 -0.80 16 25 H 0.10 -0.57 8.08 -51.93 -0.42 -0.99 16 26 H 0.41 -0.98 8.06 -40.82 -0.33 -1.31 16 27 H 0.15 0.08 7.64 -52.49 -0.40 -0.32 16 28 H 0.15 -0.24 8.06 -52.49 -0.42 -0.67 16 29 H 0.08 -0.34 7.96 -51.92 -0.41 -0.75 16 30 H 0.38 -1.81 8.74 45.56 0.40 -1.41 16 31 H -0.25 -0.01 7.11 56.52 0.40 0.39 16 32 H -0.26 0.21 7.11 56.52 0.40 0.61 16 33 H 0.16 -0.50 4.89 -52.49 -0.26 -0.76 16 34 H 0.09 -0.31 7.90 -51.93 -0.41 -0.72 16 35 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 LS Contribution 311.01 15.07 4.69 4.69 Total: 0.00 -10.02 311.01 -7.81 -17.83 By element: Atomic # 1 Polarization: -6.78 SS G_CDS: -3.94 Total: -10.72 kcal Atomic # 6 Polarization: 2.82 SS G_CDS: -3.53 Total: -0.71 kcal Atomic # 7 Polarization: -1.66 SS G_CDS: 0.40 Total: -1.26 kcal Atomic # 8 Polarization: -2.35 SS G_CDS: -0.36 Total: -2.72 kcal Atomic # 14 Polarization: -2.05 SS G_CDS: -5.07 Total: -7.12 kcal Total LS contribution 4.69 Total: 4.69 kcal Total: -10.02 -7.81 -17.83 kcal The number of atoms in the molecule is 35 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_13287726.mol2 35 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 42.441 kcal (2) G-P(sol) polarization free energy of solvation -10.022 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 32.418 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.813 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.835 kcal (6) G-S(sol) free energy of system = (1) + (5) 24.606 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds