Wall clock time and date at job start Tue Mar 9 2021 13:24:47 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 C 1.53006 * 109.46949 * 257.91985 * 3 2 1 5 5 H 1.08997 * 112.84633 * 43.80728 * 4 3 2 6 6 C 1.53947 * 113.66793 * 272.55791 * 4 3 2 7 7 C 1.53779 * 87.02241 * 220.06988 * 6 4 3 8 8 H 1.09003 * 113.61247 * 270.77517 * 7 6 4 9 9 N 1.46499 * 113.61441 * 139.95690 * 7 6 4 10 10 C 1.34777 * 120.00199 * 105.86649 * 9 7 6 11 11 O 1.21283 * 119.99750 * 359.97438 * 10 9 7 12 12 C 1.50702 * 119.99928 * 180.27479 * 10 9 7 13 13 C 1.52996 * 109.47159 * 179.72352 * 12 10 9 14 14 O 1.42898 * 109.47180 * 179.97438 * 13 12 10 15 15 C 1.35902 * 116.99909 * 179.97438 * 14 13 12 16 16 C 1.38729 * 120.05692 * 359.73248 * 15 14 13 17 17 C 1.38147 * 119.94508 * 179.70091 * 16 15 14 18 18 C 1.38261 * 120.05283 * 0.58611 * 17 16 15 19 19 C 1.50701 * 119.94222 * 179.70299 * 18 17 16 20 20 O 1.42901 * 109.46911 * 119.98253 * 19 18 17 21 21 Si 1.86290 * 109.47338 * 359.97438 * 19 18 17 22 22 C 1.38262 * 120.11511 * 359.68468 * 18 17 16 23 23 C 1.38149 * 120.05203 * 0.02562 * 22 18 17 24 24 C 1.53776 * 87.17037 * 25.36282 * 7 6 4 25 25 H 1.09006 * 109.47077 * 137.92585 * 3 2 1 26 26 H 1.09003 * 109.47273 * 17.91919 * 3 2 1 27 27 H 1.09003 * 113.66328 * 105.54016 * 6 4 3 28 28 H 1.09000 * 113.61581 * 334.59485 * 6 4 3 29 29 H 0.97000 * 119.99484 * 285.85746 * 9 7 6 30 30 H 1.09004 * 109.46965 * 299.72211 * 12 10 9 31 31 H 1.08994 * 109.46990 * 59.72065 * 12 10 9 32 32 H 1.09004 * 109.47066 * 299.99797 * 13 12 10 33 33 H 1.09000 * 109.47234 * 59.99288 * 13 12 10 34 34 H 1.08001 * 120.02979 * 359.97438 * 16 15 14 35 35 H 1.08006 * 119.97301 * 180.31736 * 17 16 15 36 36 H 1.08996 * 109.47165 * 239.97898 * 19 18 17 37 37 H 0.96704 * 113.99894 * 179.97438 * 20 19 18 38 38 H 1.48498 * 110.00293 * 59.99889 * 21 19 18 39 39 H 1.48500 * 110.00422 * 181.31738 * 21 19 18 40 40 H 1.07999 * 119.97776 * 180.02562 * 22 18 17 41 41 H 1.08007 * 120.02848 * 180.02562 * 23 22 18 42 42 H 1.08999 * 113.61316 * 89.16030 * 24 7 6 43 43 H 1.09003 * 113.61523 * 219.97816 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 6 3.1178 0.3028 1.4106 5 1 2.5756 -0.2433 2.1826 6 6 3.2638 1.8066 1.7061 7 6 4.5660 1.4534 2.4438 8 1 4.4212 1.2230 3.4993 9 7 5.6492 2.4128 2.2143 10 6 5.9984 3.2799 3.1851 11 8 5.4156 3.2663 4.2487 12 6 7.1085 4.2709 2.9468 13 6 7.2977 5.1348 4.1952 14 8 8.3507 6.0741 3.9694 15 6 8.6483 6.9238 4.9874 16 6 7.9377 6.8587 6.1771 17 6 8.2463 7.7195 7.2126 18 6 9.2543 8.6533 7.0597 19 6 9.5843 9.5956 8.1886 20 8 10.9447 9.4076 8.5836 21 14 8.4637 9.2478 9.6355 22 6 9.9602 8.7241 5.8730 23 6 9.6595 7.8615 4.8366 24 6 4.6466 0.2070 1.5467 25 1 2.9710 0.7637 -0.6887 26 1 2.9718 -0.9770 -0.3162 27 1 2.4855 2.2017 2.3590 28 1 3.4180 2.4139 0.8142 29 1 6.1151 2.4237 1.3635 30 1 8.0334 3.7356 2.7317 31 1 6.8517 4.9072 2.1000 32 1 6.3728 5.6701 4.4102 33 1 7.5543 4.4983 5.0420 34 1 7.1468 6.1327 6.2952 35 1 7.6967 7.6657 8.1409 36 1 9.4410 10.6240 7.8571 37 1 11.2272 9.9830 9.3076 38 1 8.6493 7.8486 10.0970 39 1 8.7576 10.1913 10.7440 40 1 10.7474 9.4541 5.7561 41 1 10.2115 7.9168 3.9099 42 1 5.1797 0.3762 0.6111 43 1 4.9845 -0.6870 2.0707 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16663504_4549602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:47 Heat of formation + Delta-G solvation = -30.205257 kcal Electronic energy + Delta-G solvation = -24480.086873 eV Core-core repulsion = 20686.024260 eV Total energy + Delta-G solvation = -3794.062613 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -41.51440 -41.10175 -39.85507 -38.98619 -37.44547 -37.29638 -34.90185 -33.40752 -32.00448 -31.59694 -31.06339 -26.95860 -26.74103 -25.77456 -24.27467 -23.18616 -21.98448 -21.60827 -20.79480 -19.43762 -18.87587 -18.49651 -17.93808 -17.47850 -17.35616 -17.00328 -16.70576 -16.50672 -16.12685 -15.67991 -15.54615 -15.49449 -15.05195 -14.65958 -14.47431 -14.27553 -14.18175 -13.95395 -13.90858 -13.70638 -13.62352 -13.52230 -13.06657 -12.95385 -12.84012 -12.69214 -12.34465 -12.29390 -11.94115 -11.84388 -11.71240 -11.61069 -11.54586 -10.98571 -10.46054 -10.18644 -9.93228 -9.09696 -4.94024 0.38449 0.41705 1.31757 1.47051 1.61520 1.64940 1.80433 1.82338 1.98442 2.45804 2.71389 2.85580 3.21760 3.38259 3.38444 3.48764 3.58878 3.62446 3.80696 3.83029 3.86741 3.87953 4.04101 4.06211 4.19799 4.28535 4.34248 4.36811 4.39362 4.45507 4.47244 4.55714 4.58225 4.62433 4.66372 4.79035 4.80255 4.85037 5.04339 5.06554 5.27398 5.37634 5.37874 5.60250 5.79134 6.29717 6.41084 6.47479 6.59587 7.05379 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.433 5.433 2 C 0.202 3.798 3 C -0.014 4.014 4 C -0.107 4.107 5 H 0.103 0.897 6 C -0.151 4.151 7 C 0.122 3.878 8 H 0.117 0.883 9 N -0.719 5.719 10 C 0.521 3.479 11 O -0.537 6.537 12 C -0.142 4.142 13 C 0.073 3.927 14 O -0.316 6.316 15 C 0.137 3.863 16 C -0.202 4.202 17 C -0.073 4.073 18 C -0.112 4.112 19 C -0.070 4.070 20 O -0.537 6.537 21 Si 0.678 3.322 22 C -0.052 4.052 23 C -0.151 4.151 24 C -0.137 4.137 25 H 0.110 0.890 26 H 0.114 0.886 27 H 0.076 0.924 28 H 0.091 0.909 29 H 0.404 0.596 30 H 0.107 0.893 31 H 0.108 0.892 32 H 0.074 0.926 33 H 0.073 0.927 34 H 0.135 0.865 35 H 0.129 0.871 36 H 0.075 0.925 37 H 0.379 0.621 38 H -0.256 1.256 39 H -0.261 1.261 40 H 0.132 0.868 41 H 0.134 0.866 42 H 0.094 0.906 43 H 0.083 0.917 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.010 -0.034 -3.794 4.844 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.110 5.110 2 C -0.116 4.116 3 C -0.054 4.054 4 C -0.127 4.127 5 H 0.122 0.878 6 C -0.190 4.190 7 C 0.017 3.983 8 H 0.135 0.865 9 N -0.370 5.370 10 C 0.308 3.692 11 O -0.413 6.413 12 C -0.182 4.182 13 C -0.003 4.003 14 O -0.230 6.230 15 C 0.091 3.909 16 C -0.220 4.220 17 C -0.091 4.091 18 C -0.112 4.112 19 C -0.180 4.180 20 O -0.344 6.344 21 Si 0.579 3.421 22 C -0.070 4.070 23 C -0.169 4.169 24 C -0.175 4.175 25 H 0.128 0.872 26 H 0.132 0.868 27 H 0.094 0.906 28 H 0.109 0.891 29 H 0.239 0.761 30 H 0.126 0.874 31 H 0.126 0.874 32 H 0.092 0.908 33 H 0.091 0.909 34 H 0.153 0.847 35 H 0.147 0.853 36 H 0.093 0.907 37 H 0.227 0.773 38 H -0.180 1.180 39 H -0.187 1.187 40 H 0.150 0.850 41 H 0.152 0.848 42 H 0.113 0.887 43 H 0.101 0.899 Dipole moment (debyes) X Y Z Total from point charges 0.888 -0.746 -2.845 3.072 hybrid contribution 1.625 0.299 -0.003 1.653 sum 2.514 -0.446 -2.848 3.825 Atomic orbital electron populations 1.81299 1.13147 1.08551 1.07981 1.29182 0.95312 0.93474 0.93648 1.19297 0.81761 1.05702 0.98687 1.22376 0.96489 0.97774 0.96035 0.87834 1.23666 0.98174 0.95722 1.01418 1.22509 0.86274 0.88579 1.00951 0.86469 1.45932 1.37469 1.36070 1.17556 1.20345 0.83750 0.81243 0.83901 1.90759 1.54491 1.70639 1.25430 1.21479 0.99117 0.97561 1.00048 1.22428 0.89872 0.90345 0.97613 1.85970 1.53198 1.45642 1.38185 1.18966 0.94549 0.90423 0.86931 1.21235 1.03517 1.03500 0.93780 1.20735 0.96442 0.93686 0.98227 1.19150 0.98503 0.98646 0.94927 1.24712 0.89432 1.00390 1.03440 1.86592 1.25832 1.65615 1.56378 0.95126 0.88731 0.80834 0.77385 1.20798 0.97494 0.97391 0.91351 1.20476 0.98895 0.96692 1.00852 1.23402 0.95216 0.98335 1.00567 0.87181 0.86829 0.90561 0.89052 0.76100 0.87439 0.87412 0.90800 0.90917 0.84705 0.85333 0.90658 0.77338 1.18017 1.18670 0.85042 0.84843 0.88737 0.89855 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.72 18.54 42.15 0.78 -0.93 16 2 C 0.20 -0.07 15.42 -20.76 -0.32 -0.39 16 3 C -0.01 0.08 5.54 -29.52 -0.16 -0.09 16 4 C -0.11 0.53 3.61 -89.72 -0.32 0.20 16 5 H 0.10 -0.43 8.12 -51.93 -0.42 -0.85 16 6 C -0.15 0.55 7.44 -25.83 -0.19 0.36 16 7 C 0.12 -0.41 4.21 -67.12 -0.28 -0.69 16 8 H 0.12 -0.14 7.50 -51.93 -0.39 -0.53 16 9 N -0.72 2.63 5.36 -53.02 -0.28 2.35 16 10 C 0.52 -0.46 7.83 -10.98 -0.09 -0.54 16 11 O -0.54 -1.80 15.60 5.55 0.09 -1.72 16 12 C -0.14 0.38 6.07 -27.88 -0.17 0.21 16 13 C 0.07 -0.01 4.03 37.16 0.15 0.13 16 14 O -0.32 -0.46 10.14 -19.43 -0.20 -0.65 16 15 C 0.14 0.30 6.69 -39.22 -0.26 0.03 16 16 C -0.20 -0.33 9.04 -39.43 -0.36 -0.69 16 17 C -0.07 -0.11 8.66 -39.61 -0.34 -0.45 16 18 C -0.11 -0.21 5.42 -104.60 -0.57 -0.78 16 19 C -0.07 -0.03 2.81 36.01 0.10 0.07 16 20 O -0.54 -0.88 12.74 -35.23 -0.45 -1.33 16 21 Si 0.68 -0.16 29.78 -169.99 -5.06 -5.23 16 22 C -0.05 -0.10 9.60 -39.61 -0.38 -0.48 16 23 C -0.15 -0.27 9.99 -39.43 -0.39 -0.67 16 24 C -0.14 0.80 7.39 -25.92 -0.19 0.61 16 25 H 0.11 -0.80 7.85 -51.93 -0.41 -1.20 16 26 H 0.11 -0.83 8.14 -51.93 -0.42 -1.25 16 27 H 0.08 -0.13 8.14 -51.93 -0.42 -0.55 16 28 H 0.09 -0.41 7.90 -51.93 -0.41 -0.82 16 29 H 0.40 -2.65 8.71 -40.82 -0.36 -3.00 16 30 H 0.11 -0.44 8.14 -51.93 -0.42 -0.86 16 31 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 32 H 0.07 0.00 7.61 -51.93 -0.39 -0.39 16 33 H 0.07 0.02 7.63 -51.93 -0.40 -0.37 16 34 H 0.14 0.05 6.30 -52.49 -0.33 -0.28 16 35 H 0.13 -0.04 4.87 -52.48 -0.26 -0.30 16 36 H 0.08 -0.10 7.96 -51.93 -0.41 -0.51 16 37 H 0.38 -0.89 8.74 45.56 0.40 -0.50 16 38 H -0.26 -0.78 7.11 56.52 0.40 -0.38 16 39 H -0.26 -0.43 7.11 56.52 0.40 -0.03 16 40 H 0.13 0.08 8.06 -52.49 -0.42 -0.34 16 41 H 0.13 0.05 8.06 -52.48 -0.42 -0.37 16 42 H 0.09 -0.71 8.07 -51.93 -0.42 -1.13 16 43 H 0.08 -0.47 8.14 -51.93 -0.42 -0.89 16 LS Contribution 368.23 15.07 5.55 5.55 Total: 0.00 -11.23 368.23 -9.31 -20.54 By element: Atomic # 1 Polarization: -9.48 SS G_CDS: -5.95 Total: -15.43 kcal Atomic # 6 Polarization: 0.63 SS G_CDS: -3.78 Total: -3.15 kcal Atomic # 7 Polarization: 0.91 SS G_CDS: 0.50 Total: 1.41 kcal Atomic # 8 Polarization: -3.14 SS G_CDS: -0.56 Total: -3.70 kcal Atomic # 14 Polarization: -0.16 SS G_CDS: -5.06 Total: -5.23 kcal Total LS contribution 5.55 Total: 5.55 kcal Total: -11.23 -9.31 -20.54 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_4549602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -9.660 kcal (2) G-P(sol) polarization free energy of solvation -11.234 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -20.894 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.311 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.545 kcal (6) G-S(sol) free energy of system = (1) + (5) -30.205 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.83 seconds