Wall clock time and date at job start Tue Mar 9 2021 13:24:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13600 * 1 3 3 C 1.47194 * 179.97438 * 2 1 4 4 C 1.53006 * 109.46949 * 257.91985 * 3 2 1 5 5 H 1.08997 * 112.84633 * 43.80728 * 4 3 2 6 6 C 1.53947 * 113.66793 * 272.55791 * 4 3 2 7 7 C 1.53779 * 87.02241 * 220.06988 * 6 4 3 8 8 H 1.09003 * 113.61247 * 270.77517 * 7 6 4 9 9 N 1.46499 * 113.61441 * 139.95690 * 7 6 4 10 10 C 1.34777 * 120.00199 * 105.86649 * 9 7 6 11 11 O 1.21283 * 119.99750 * 359.97438 * 10 9 7 12 12 C 1.50702 * 119.99928 * 180.27479 * 10 9 7 13 13 C 1.52996 * 109.47159 * 179.72352 * 12 10 9 14 14 O 1.42898 * 109.47180 * 179.97438 * 13 12 10 15 15 C 1.35902 * 116.99909 * 179.97438 * 14 13 12 16 16 C 1.38729 * 120.05692 * 359.73248 * 15 14 13 17 17 C 1.38147 * 119.94508 * 179.70091 * 16 15 14 18 18 C 1.38261 * 120.05283 * 0.58611 * 17 16 15 19 19 C 1.50701 * 119.94222 * 179.70299 * 18 17 16 20 20 O 1.42901 * 109.46911 * 119.98253 * 19 18 17 21 21 Si 1.86290 * 109.47338 * 359.97438 * 19 18 17 22 22 C 1.38262 * 120.11511 * 359.68468 * 18 17 16 23 23 C 1.38149 * 120.05203 * 0.02562 * 22 18 17 24 24 C 1.53776 * 87.17037 * 25.36282 * 7 6 4 25 25 H 1.09006 * 109.47077 * 137.92585 * 3 2 1 26 26 H 1.09003 * 109.47273 * 17.91919 * 3 2 1 27 27 H 1.09003 * 113.66328 * 105.54016 * 6 4 3 28 28 H 1.09000 * 113.61581 * 334.59485 * 6 4 3 29 29 H 0.97000 * 119.99484 * 285.85746 * 9 7 6 30 30 H 1.09004 * 109.46965 * 299.72211 * 12 10 9 31 31 H 1.08994 * 109.46990 * 59.72065 * 12 10 9 32 32 H 1.09004 * 109.47066 * 299.99797 * 13 12 10 33 33 H 1.09000 * 109.47234 * 59.99288 * 13 12 10 34 34 H 1.08001 * 120.02979 * 359.97438 * 16 15 14 35 35 H 1.08006 * 119.97301 * 180.31736 * 17 16 15 36 36 H 1.08996 * 109.47165 * 239.97898 * 19 18 17 37 37 H 0.96704 * 113.99894 * 179.97438 * 20 19 18 38 38 H 1.48498 * 110.00293 * 59.99889 * 21 19 18 39 39 H 1.48500 * 110.00422 * 181.31738 * 21 19 18 40 40 H 1.07999 * 119.97776 * 180.02562 * 22 18 17 41 41 H 1.08007 * 120.02848 * 180.02562 * 23 22 18 42 42 H 1.08999 * 113.61316 * 89.16030 * 24 7 6 43 43 H 1.09003 * 113.61523 * 219.97816 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 6 3.1178 0.3028 1.4106 5 1 2.5756 -0.2433 2.1826 6 6 3.2638 1.8066 1.7061 7 6 4.5660 1.4534 2.4438 8 1 4.4212 1.2230 3.4993 9 7 5.6492 2.4128 2.2143 10 6 5.9984 3.2799 3.1851 11 8 5.4156 3.2663 4.2487 12 6 7.1085 4.2709 2.9468 13 6 7.2977 5.1348 4.1952 14 8 8.3507 6.0741 3.9694 15 6 8.6483 6.9238 4.9874 16 6 7.9377 6.8587 6.1771 17 6 8.2463 7.7195 7.2126 18 6 9.2543 8.6533 7.0597 19 6 9.5843 9.5956 8.1886 20 8 10.9447 9.4076 8.5836 21 14 8.4637 9.2478 9.6355 22 6 9.9602 8.7241 5.8730 23 6 9.6595 7.8615 4.8366 24 6 4.6466 0.2070 1.5467 25 1 2.9710 0.7637 -0.6887 26 1 2.9718 -0.9770 -0.3162 27 1 2.4855 2.2017 2.3590 28 1 3.4180 2.4139 0.8142 29 1 6.1151 2.4237 1.3635 30 1 8.0334 3.7356 2.7317 31 1 6.8517 4.9072 2.1000 32 1 6.3728 5.6701 4.4102 33 1 7.5543 4.4983 5.0420 34 1 7.1468 6.1327 6.2952 35 1 7.6967 7.6657 8.1409 36 1 9.4410 10.6240 7.8571 37 1 11.2272 9.9830 9.3076 38 1 8.6493 7.8486 10.0970 39 1 8.7576 10.1913 10.7440 40 1 10.7474 9.4541 5.7561 41 1 10.2115 7.9168 3.9099 42 1 5.1797 0.3762 0.6111 43 1 4.9845 -0.6870 2.0707 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16663504_4549602.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:24:46 Heat of formation + Delta-G solvation = -32.082357 kcal Electronic energy + Delta-G solvation = -24480.168270 eV Core-core repulsion = 20686.024260 eV Total energy + Delta-G solvation = -3794.144010 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 317.146 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -41.43349 -41.05367 -39.70654 -39.02399 -37.48198 -37.35753 -34.77269 -33.34478 -32.05545 -31.60651 -30.84405 -26.73212 -26.59280 -25.75832 -24.17079 -23.14733 -22.03878 -21.46712 -20.49281 -19.45950 -18.68847 -18.54344 -17.86095 -17.43952 -17.21548 -16.93623 -16.76203 -16.24482 -16.04335 -15.71220 -15.58015 -15.34337 -14.98393 -14.67313 -14.48705 -14.28277 -14.15878 -13.97488 -13.86062 -13.68471 -13.49235 -13.28674 -12.92161 -12.87495 -12.78458 -12.49168 -12.42757 -12.00025 -11.98372 -11.73142 -11.70830 -11.52734 -11.24170 -10.92197 -10.49270 -10.03459 -9.98867 -9.19428 -4.94602 0.27932 0.31210 1.29862 1.57176 1.57416 1.74164 1.86047 1.88788 1.93011 2.57614 2.62745 3.10848 3.40091 3.55633 3.61189 3.73761 3.79666 3.82372 3.89434 3.93108 3.94955 3.98248 4.07669 4.26375 4.34492 4.40617 4.43833 4.49625 4.59998 4.68413 4.73177 4.81064 4.82244 4.88805 4.94906 4.97359 4.98261 5.12071 5.18839 5.21410 5.28298 5.36775 5.50575 5.67525 5.71692 6.32903 6.56343 6.60263 6.68689 7.25440 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.520 5.520 2 C 0.233 3.767 3 C -0.011 4.011 4 C -0.101 4.101 5 H 0.090 0.910 6 C -0.154 4.154 7 C 0.110 3.890 8 H 0.087 0.913 9 N -0.702 5.702 10 C 0.517 3.483 11 O -0.589 6.589 12 C -0.132 4.132 13 C 0.071 3.929 14 O -0.319 6.319 15 C 0.123 3.877 16 C -0.210 4.210 17 C -0.083 4.083 18 C -0.125 4.125 19 C -0.076 4.076 20 O -0.558 6.558 21 Si 0.753 3.247 22 C -0.060 4.060 23 C -0.158 4.158 24 C -0.115 4.115 25 H 0.141 0.859 26 H 0.145 0.855 27 H 0.047 0.953 28 H 0.108 0.892 29 H 0.422 0.578 30 H 0.127 0.873 31 H 0.129 0.871 32 H 0.066 0.934 33 H 0.061 0.939 34 H 0.141 0.859 35 H 0.141 0.859 36 H 0.098 0.902 37 H 0.394 0.606 38 H -0.304 1.304 39 H -0.284 1.284 40 H 0.142 0.858 41 H 0.145 0.855 42 H 0.125 0.875 43 H 0.085 0.915 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.518 -0.061 -5.677 7.255 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.198 5.198 2 C -0.083 4.083 3 C -0.050 4.050 4 C -0.122 4.122 5 H 0.108 0.892 6 C -0.192 4.192 7 C 0.004 3.996 8 H 0.105 0.895 9 N -0.354 5.354 10 C 0.305 3.695 11 O -0.469 6.469 12 C -0.172 4.172 13 C -0.005 4.005 14 O -0.233 6.233 15 C 0.077 3.923 16 C -0.228 4.228 17 C -0.100 4.100 18 C -0.126 4.126 19 C -0.185 4.185 20 O -0.368 6.368 21 Si 0.659 3.341 22 C -0.078 4.078 23 C -0.176 4.176 24 C -0.153 4.153 25 H 0.159 0.841 26 H 0.163 0.837 27 H 0.066 0.934 28 H 0.126 0.874 29 H 0.260 0.740 30 H 0.145 0.855 31 H 0.147 0.853 32 H 0.084 0.916 33 H 0.080 0.920 34 H 0.158 0.842 35 H 0.158 0.842 36 H 0.115 0.885 37 H 0.245 0.755 38 H -0.232 1.232 39 H -0.211 1.211 40 H 0.159 0.841 41 H 0.163 0.837 42 H 0.143 0.857 43 H 0.104 0.896 Dipole moment (debyes) X Y Z Total from point charges 2.411 -0.765 -4.779 5.407 hybrid contribution 1.213 0.286 0.628 1.396 sum 3.624 -0.479 -4.151 5.531 Atomic orbital electron populations 1.81321 1.15983 1.11658 1.10866 1.30170 0.96227 0.90857 0.91081 1.19701 0.78135 1.08453 0.98728 1.22277 0.97381 0.96371 0.96149 0.89199 1.23715 0.97078 0.96982 1.01452 1.22513 0.86734 0.90222 1.00086 0.89474 1.45822 1.36933 1.34907 1.17699 1.20690 0.83688 0.81587 0.83548 1.90743 1.56383 1.72184 1.27616 1.21447 0.99281 0.97145 0.99306 1.22481 0.89092 0.90129 0.98794 1.85955 1.53593 1.45729 1.38009 1.19159 0.94929 0.90867 0.87295 1.21389 1.03764 1.03748 0.93918 1.20941 0.96718 0.93677 0.98686 1.19414 0.98598 0.99001 0.95540 1.24864 0.89088 1.01291 1.03303 1.86545 1.26390 1.66550 1.57344 0.94266 0.87701 0.76628 0.75490 1.20992 0.97784 0.97679 0.91375 1.20681 0.98918 0.96581 1.01424 1.23345 0.94255 0.96677 1.01017 0.84122 0.83744 0.93417 0.87371 0.73967 0.85451 0.85313 0.91584 0.92020 0.84174 0.84206 0.88466 0.75523 1.23159 1.21066 0.84058 0.83679 0.85676 0.89603 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.87 18.54 20.00 0.37 -4.50 16 2 C 0.23 -0.19 15.42 89.44 1.38 1.19 16 3 C -0.01 0.14 5.54 28.79 0.16 0.30 16 4 C -0.10 1.12 3.61 -10.21 -0.04 1.08 16 5 H 0.09 -0.71 8.12 -2.39 -0.02 -0.73 16 6 C -0.15 1.13 7.44 31.18 0.23 1.37 16 7 C 0.11 -0.74 4.21 45.52 0.19 -0.55 16 8 H 0.09 -0.03 7.50 -2.39 -0.02 -0.04 16 9 N -0.70 5.78 5.36 -440.04 -2.36 3.42 16 10 C 0.52 -0.76 7.83 87.66 0.69 -0.07 16 11 O -0.59 -5.14 15.60 -3.04 -0.05 -5.18 16 12 C -0.13 0.79 6.07 29.85 0.18 0.97 16 13 C 0.07 0.03 4.03 71.98 0.29 0.32 16 14 O -0.32 -1.03 10.14 -92.44 -0.94 -1.97 16 15 C 0.12 0.63 6.69 22.50 0.15 0.78 16 16 C -0.21 -0.94 9.04 22.37 0.20 -0.74 16 17 C -0.08 -0.32 8.66 22.25 0.19 -0.12 16 18 C -0.13 -0.51 5.42 -19.85 -0.11 -0.62 16 19 C -0.08 -0.05 2.81 71.24 0.20 0.15 16 20 O -0.56 -1.75 12.74 -148.98 -1.90 -3.65 16 21 Si 0.75 -0.11 29.78 68.60 2.04 1.93 16 22 C -0.06 -0.23 9.60 22.25 0.21 -0.02 16 23 C -0.16 -0.62 9.99 22.37 0.22 -0.39 16 24 C -0.12 1.60 7.39 31.12 0.23 1.83 16 25 H 0.14 -2.61 7.85 -2.38 -0.02 -2.63 16 26 H 0.14 -2.67 8.14 -2.39 -0.02 -2.69 16 27 H 0.05 -0.07 8.14 -2.39 -0.02 -0.09 16 28 H 0.11 -1.17 7.90 -2.39 -0.02 -1.19 16 29 H 0.42 -6.60 8.71 -92.71 -0.81 -7.40 16 30 H 0.13 -1.25 8.14 -2.38 -0.02 -1.27 16 31 H 0.13 -1.29 8.14 -2.39 -0.02 -1.31 16 32 H 0.07 0.12 7.61 -2.38 -0.02 0.10 16 33 H 0.06 0.15 7.63 -2.39 -0.02 0.13 16 34 H 0.14 0.35 6.30 -2.91 -0.02 0.33 16 35 H 0.14 0.05 4.87 -2.91 -0.01 0.03 16 36 H 0.10 -0.36 7.96 -2.39 -0.02 -0.38 16 37 H 0.39 -1.97 8.74 -74.05 -0.65 -2.62 16 38 H -0.30 -2.38 7.11 99.48 0.71 -1.67 16 39 H -0.28 -0.98 7.11 99.48 0.71 -0.27 16 40 H 0.14 0.15 8.06 -2.91 -0.02 0.13 16 41 H 0.15 0.09 8.06 -2.91 -0.02 0.07 16 42 H 0.13 -2.44 8.07 -2.39 -0.02 -2.46 16 43 H 0.09 -1.14 8.14 -2.39 -0.02 -1.16 16 Total: 0.00 -30.78 368.23 1.19 -29.59 By element: Atomic # 1 Polarization: -24.74 SS G_CDS: -0.37 Total: -25.11 kcal Atomic # 6 Polarization: 1.08 SS G_CDS: 4.39 Total: 5.47 kcal Atomic # 7 Polarization: 0.92 SS G_CDS: -1.99 Total: -1.07 kcal Atomic # 8 Polarization: -7.92 SS G_CDS: -2.88 Total: -10.80 kcal Atomic # 14 Polarization: -0.11 SS G_CDS: 2.04 Total: 1.93 kcal Total: -30.78 1.19 -29.59 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_4549602.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -2.497 kcal (2) G-P(sol) polarization free energy of solvation -30.778 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -33.275 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.193 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -29.586 kcal (6) G-S(sol) free energy of system = (1) + (5) -32.082 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds