Wall clock time and date at job start Tue Mar 9 2021 13:25:48 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13604 * 1 3 3 C 1.47198 * 179.97438 * 2 1 4 4 C 1.53000 * 109.47421 * 316.91148 * 3 2 1 5 5 H 1.08994 * 112.90673 * 316.25510 * 4 3 2 6 6 C 1.53779 * 113.61312 * 185.00187 * 4 3 2 7 7 C 1.53780 * 87.07898 * 220.01757 * 6 4 3 8 8 H 1.08996 * 113.61599 * 270.79915 * 7 6 4 9 9 N 1.46505 * 113.61505 * 139.97851 * 7 6 4 10 10 C 1.34780 * 120.00216 * 156.52753 * 9 7 6 11 11 O 1.21287 * 119.99448 * 0.02562 * 10 9 7 12 12 C 1.50690 * 119.99950 * 180.02562 * 10 9 7 13 13 O 1.42900 * 109.46915 * 180.02562 * 12 10 9 14 14 C 1.35918 * 117.00284 * 180.02562 * 13 12 10 15 15 C 1.38679 * 120.05527 * 359.97438 * 14 13 12 16 16 C 1.38193 * 119.95577 * 179.69872 * 15 14 13 17 17 C 1.38243 * 120.06769 * 0.28454 * 16 15 14 18 18 C 1.50693 * 119.93911 * 179.97438 * 17 16 15 19 19 O 1.42903 * 109.47643 * 64.99536 * 18 17 16 20 20 Si 1.86309 * 109.47107 * 184.99800 * 18 17 16 21 21 C 1.38294 * 120.11923 * 0.02562 * 17 16 15 22 22 C 1.38189 * 120.04346 * 359.97438 * 21 17 16 23 23 Br 1.89101 * 120.03332 * 180.02562 * 22 21 17 24 24 C 1.53782 * 87.17354 * 25.39322 * 7 6 4 25 25 H 1.09004 * 109.46513 * 196.90930 * 3 2 1 26 26 H 1.09000 * 109.46759 * 76.91537 * 3 2 1 27 27 H 1.08999 * 113.61465 * 105.46981 * 6 4 3 28 28 H 1.08999 * 113.68822 * 334.57693 * 6 4 3 29 29 H 0.97005 * 119.99959 * 336.53258 * 9 7 6 30 30 H 1.09001 * 109.47555 * 60.00596 * 12 10 9 31 31 H 1.08998 * 109.47359 * 300.00242 * 12 10 9 32 32 H 1.08002 * 120.02632 * 359.97438 * 15 14 13 33 33 H 1.07991 * 119.96579 * 180.25598 * 16 15 14 34 34 H 1.09001 * 109.47185 * 304.99078 * 18 17 16 35 35 H 0.96701 * 113.99666 * 60.00009 * 19 18 17 36 36 H 1.48505 * 109.99813 * 179.97438 * 20 18 17 37 37 H 1.48504 * 109.99780 * 301.31529 * 20 18 17 38 38 H 1.07998 * 119.97372 * 179.97438 * 21 17 16 39 39 H 1.09000 * 113.62004 * 89.15573 * 24 7 6 40 40 H 1.09007 * 113.61296 * 220.06300 * 24 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1360 0.0000 0.0000 3 6 2.6080 0.0007 0.0000 4 6 3.1186 -1.0526 0.9854 5 1 2.5762 -1.0473 1.9308 6 6 4.6473 -1.0503 1.1522 7 6 4.5680 -2.5859 1.1766 8 1 4.4234 -2.9998 2.1744 9 7 5.6520 -3.2412 0.4404 10 6 6.0023 -4.5073 0.7420 11 8 5.4198 -5.1041 1.6227 12 6 7.1176 -5.1811 -0.0148 13 8 7.2983 -6.5078 0.4844 14 6 8.2732 -7.2575 -0.0943 15 6 9.0394 -6.7274 -1.1215 16 6 10.0342 -7.4892 -1.7043 17 6 10.2624 -8.7811 -1.2683 18 6 11.3476 -9.6095 -1.9062 19 8 12.6201 -9.0191 -1.6336 20 14 11.3019 -11.3364 -1.2084 21 6 9.4959 -9.3149 -0.2485 22 6 8.4998 -8.5573 0.3376 23 35 7.4523 -9.2873 1.7326 24 6 3.2659 -2.4556 0.3690 25 1 2.9708 0.9841 0.2989 26 1 2.9714 -0.2318 -1.0010 27 1 4.9832 -0.6154 2.0935 28 1 5.1814 -0.6543 0.2885 29 1 6.1176 -2.7640 -0.2641 30 1 8.0396 -4.6147 0.1160 31 1 6.8642 -5.2233 -1.0741 32 1 8.8617 -5.7182 -1.4629 33 1 10.6337 -7.0751 -2.5014 34 1 11.1887 -9.6489 -2.9838 35 1 12.8289 -8.9519 -0.6918 36 1 12.3671 -12.1637 -1.8300 37 1 11.4857 -11.2940 0.2646 38 1 9.6759 -10.3246 0.0900 39 1 3.4204 -2.4444 -0.7100 40 1 2.4881 -3.1535 0.6790 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16663504_6201210.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:25:48 Heat of formation + Delta-G solvation = -16.800845 kcal Electronic energy + Delta-G solvation = -25031.704524 eV Core-core repulsion = 21053.942786 eV Total energy + Delta-G solvation = -3977.761738 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 381.041 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.69101 -41.01654 -39.77992 -38.93863 -37.47876 -37.29591 -34.82999 -33.48657 -32.14947 -31.35003 -30.37081 -29.30847 -26.59810 -26.38658 -24.60220 -23.62333 -22.39368 -21.64475 -20.58239 -19.54024 -18.73744 -18.48363 -18.03779 -17.46761 -17.32010 -16.77395 -16.42209 -16.25709 -16.20493 -15.77578 -15.58813 -15.34537 -15.18872 -14.79773 -14.48834 -14.28399 -14.02745 -13.92747 -13.85512 -13.49190 -13.36181 -13.28460 -12.87928 -12.52664 -12.40038 -12.35035 -12.16327 -11.99402 -11.85164 -11.72002 -11.53263 -11.24457 -11.19099 -10.89121 -10.62214 -10.03603 -9.98116 -9.30278 -4.94788 -0.01018 0.10322 0.65711 1.29010 1.47223 1.50091 1.56341 1.84577 1.89318 1.92530 2.41379 2.58339 3.11185 3.42811 3.51723 3.54043 3.58522 3.73540 3.80418 3.87746 3.89922 3.96942 4.06737 4.10880 4.13328 4.36133 4.40591 4.51264 4.59092 4.69515 4.81585 4.82323 4.88462 4.94427 4.98160 5.06007 5.10960 5.21436 5.32311 5.33070 5.48804 5.65673 6.09544 6.48378 6.54437 6.69333 7.22831 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.521 5.521 2 C 0.232 3.768 3 C -0.010 4.010 4 C -0.102 4.102 5 H 0.088 0.912 6 C -0.112 4.112 7 C 0.111 3.889 8 H 0.084 0.916 9 N -0.696 5.696 10 C 0.510 3.490 11 O -0.574 6.574 12 C 0.032 3.968 13 O -0.306 6.306 14 C 0.150 3.850 15 C -0.194 4.194 16 C -0.032 4.032 17 C -0.149 4.149 18 C -0.060 4.060 19 O -0.543 6.543 20 Si 0.734 3.266 21 C -0.057 4.057 22 C -0.141 4.141 23 Br -0.053 7.053 24 C -0.154 4.154 25 H 0.146 0.854 26 H 0.143 0.857 27 H 0.086 0.914 28 H 0.130 0.870 29 H 0.425 0.575 30 H 0.130 0.870 31 H 0.131 0.869 32 H 0.176 0.824 33 H 0.158 0.842 34 H 0.138 0.862 35 H 0.386 0.614 36 H -0.297 1.297 37 H -0.287 1.287 38 H 0.143 0.857 39 H 0.111 0.889 40 H 0.044 0.956 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.836 6.704 -6.710 11.692 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.199 5.199 2 C -0.084 4.084 3 C -0.049 4.049 4 C -0.122 4.122 5 H 0.106 0.894 6 C -0.150 4.150 7 C 0.006 3.994 8 H 0.102 0.898 9 N -0.350 5.350 10 C 0.296 3.704 11 O -0.452 6.452 12 C -0.046 4.046 13 O -0.218 6.218 14 C 0.102 3.898 15 C -0.213 4.213 16 C -0.050 4.050 17 C -0.150 4.150 18 C -0.171 4.171 19 O -0.351 6.351 20 Si 0.641 3.359 21 C -0.077 4.077 22 C -0.221 4.221 23 Br 0.032 6.968 24 C -0.193 4.193 25 H 0.163 0.837 26 H 0.161 0.839 27 H 0.104 0.896 28 H 0.148 0.852 29 H 0.263 0.737 30 H 0.148 0.852 31 H 0.149 0.851 32 H 0.193 0.807 33 H 0.176 0.824 34 H 0.156 0.844 35 H 0.236 0.764 36 H -0.224 1.224 37 H -0.214 1.214 38 H 0.161 0.839 39 H 0.130 0.870 40 H 0.063 0.937 Dipole moment (debyes) X Y Z Total from point charges 4.632 5.378 -5.600 9.041 hybrid contribution 1.082 0.603 0.492 1.333 sum 5.714 5.981 -5.108 9.721 Atomic orbital electron populations 1.81326 1.16049 1.11352 1.11211 1.30204 0.96269 0.90896 0.91010 1.19706 0.78046 1.03397 1.03780 1.22274 0.97486 0.93589 0.98899 0.89370 1.23347 0.94165 0.91971 1.05505 1.22520 0.86575 0.94278 0.96008 0.89805 1.45644 1.37142 1.12732 1.39465 1.20574 0.83959 0.82722 0.83171 1.90795 1.55575 1.65285 1.33523 1.22883 0.99591 0.81921 1.00159 1.86250 1.50952 1.26009 1.58627 1.18816 0.88738 0.89709 0.92498 1.21628 0.98551 1.03282 0.97804 1.21240 0.94287 0.91981 0.97492 1.20211 0.99541 0.96948 0.98329 1.24876 0.81668 1.04435 1.06119 1.86582 1.34850 1.82320 1.31340 0.94305 0.88246 0.75954 0.77435 1.20951 0.92794 0.99241 0.94696 1.21136 1.03350 0.95292 1.02359 1.96774 1.69701 1.83963 1.46318 1.23738 0.96962 0.96798 1.01789 0.83669 0.83933 0.89570 0.85236 0.73655 0.85204 0.85125 0.80714 0.82434 0.84429 0.76444 1.22445 1.21427 0.83933 0.87040 0.93683 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.52 -4.82 18.54 20.01 0.37 -4.45 16 2 C 0.23 -0.26 15.42 89.44 1.38 1.12 16 3 C -0.01 0.14 5.54 28.79 0.16 0.30 16 4 C -0.10 1.17 3.61 -10.21 -0.04 1.13 16 5 H 0.09 -0.70 8.12 -2.39 -0.02 -0.72 16 6 C -0.11 1.66 7.39 31.12 0.23 1.89 16 7 C 0.11 -0.78 4.21 45.52 0.19 -0.59 16 8 H 0.08 0.03 7.50 -2.39 -0.02 0.01 16 9 N -0.70 6.45 5.36 -440.03 -2.36 4.09 16 10 C 0.51 -0.31 7.91 87.65 0.69 0.38 16 11 O -0.57 -7.20 16.12 15.99 0.26 -6.94 16 12 C 0.03 -0.22 5.22 71.23 0.37 0.15 16 13 O -0.31 -1.03 9.01 -73.59 -0.66 -1.69 16 14 C 0.15 0.15 6.68 22.52 0.15 0.30 16 15 C -0.19 1.18 9.04 22.36 0.20 1.38 16 16 C -0.03 0.18 9.68 22.26 0.22 0.40 16 17 C -0.15 0.46 5.35 -19.85 -0.11 0.35 16 18 C -0.06 0.23 2.80 71.23 0.20 0.43 16 19 O -0.54 0.64 12.83 -148.98 -1.91 -1.27 16 20 Si 0.73 -1.42 29.88 68.60 2.05 0.63 16 21 C -0.06 -0.02 8.40 22.27 0.19 0.17 16 22 C -0.14 -0.56 6.24 22.40 0.14 -0.42 16 23 Br -0.05 -0.42 33.16 -20.37 -0.68 -1.10 16 24 C -0.15 1.18 7.45 31.18 0.23 1.41 16 25 H 0.15 -2.80 8.14 -2.38 -0.02 -2.82 16 26 H 0.14 -2.80 7.85 -2.39 -0.02 -2.82 16 27 H 0.09 -1.21 8.14 -2.39 -0.02 -1.23 16 28 H 0.13 -2.76 8.07 -2.39 -0.02 -2.78 16 29 H 0.42 -7.77 8.71 -92.70 -0.81 -8.58 16 30 H 0.13 -1.80 7.66 -2.39 -0.02 -1.81 16 31 H 0.13 -1.82 7.66 -2.39 -0.02 -1.84 16 32 H 0.18 -2.45 6.30 -2.91 -0.02 -2.47 16 33 H 0.16 -1.51 8.06 -2.92 -0.02 -1.54 16 34 H 0.14 -0.94 7.96 -2.39 -0.02 -0.96 16 35 H 0.39 -2.25 8.70 -74.06 -0.64 -2.89 16 36 H -0.30 -1.60 7.11 99.48 0.71 -0.90 16 37 H -0.29 -0.87 7.01 99.48 0.70 -0.18 16 38 H 0.14 -0.13 4.84 -2.91 -0.01 -0.15 16 39 H 0.11 -1.31 7.90 -2.39 -0.02 -1.33 16 40 H 0.04 -0.04 8.14 -2.38 -0.02 -0.06 16 Total: 0.00 -36.32 367.70 0.97 -35.35 By element: Atomic # 1 Polarization: -32.73 SS G_CDS: -0.31 Total: -33.04 kcal Atomic # 6 Polarization: 4.21 SS G_CDS: 4.21 Total: 8.42 kcal Atomic # 7 Polarization: 1.63 SS G_CDS: -1.99 Total: -0.36 kcal Atomic # 8 Polarization: -7.59 SS G_CDS: -2.32 Total: -9.91 kcal Atomic # 14 Polarization: -1.42 SS G_CDS: 2.05 Total: 0.63 kcal Atomic # 35 Polarization: -0.42 SS G_CDS: -0.68 Total: -1.10 kcal Total: -36.32 0.97 -35.35 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_6201210.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 18.551 kcal (2) G-P(sol) polarization free energy of solvation -36.317 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -17.766 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.965 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -35.351 kcal (6) G-S(sol) free energy of system = (1) + (5) -16.801 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds