Wall clock time and date at job start Tue Mar 9 2021 13:26:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 N 2 2 C 1.13592 * 1 3 3 C 1.47199 * 179.97438 * 2 1 4 4 C 1.52992 * 109.47824 * 331.79036 * 3 2 1 5 5 H 1.09007 * 112.84733 * 316.20379 * 4 3 2 6 6 C 1.53780 * 113.62018 * 184.99875 * 4 3 2 7 7 C 1.53775 * 87.08390 * 220.02217 * 6 4 3 8 8 H 1.09006 * 113.61778 * 270.80301 * 7 6 4 9 9 N 1.46499 * 113.61462 * 139.98289 * 7 6 4 10 10 C 1.34784 * 119.99971 * 154.99913 * 9 7 6 11 11 O 1.21274 * 119.99897 * 359.72827 * 10 9 7 12 12 C 1.50695 * 119.99635 * 179.97438 * 10 9 7 13 13 N 1.46506 * 109.46874 * 180.02562 * 12 10 9 14 14 C 1.36837 * 125.05793 * 265.02558 * 13 12 10 15 15 C 1.34238 * 109.93276 * 179.97438 * 14 13 12 16 16 C 1.50705 * 126.49801 * 180.02562 * 15 14 13 17 17 O 1.42897 * 109.46828 * 104.97925 * 16 15 14 18 18 Si 1.86299 * 109.47111 * 344.98057 * 16 15 14 19 19 C 1.46493 * 107.00322 * 0.02562 * 15 14 13 20 20 C 1.39587 * 134.03727 * 180.02562 * 19 15 14 21 21 C 1.36669 * 119.75916 * 179.97438 * 20 19 15 22 22 C 1.38790 * 120.53320 * 0.02562 * 21 20 19 23 23 C 1.37792 * 120.66301 * 359.97438 * 22 21 20 24 24 C 1.37687 * 125.06175 * 84.72163 * 13 12 10 25 25 C 1.53784 * 87.08300 * 25.43287 * 7 6 4 26 26 H 1.09005 * 109.47133 * 211.78910 * 3 2 1 27 27 H 1.09004 * 109.47062 * 91.80012 * 3 2 1 28 28 H 1.09005 * 113.61262 * 105.47247 * 6 4 3 29 29 H 1.08999 * 113.69144 * 334.58223 * 6 4 3 30 30 H 0.96999 * 119.99984 * 334.99761 * 9 7 6 31 31 H 1.09005 * 109.47403 * 300.00056 * 12 10 9 32 32 H 1.09002 * 109.47422 * 60.00295 * 12 10 9 33 33 H 1.08001 * 125.03275 * 359.96524 * 14 13 12 34 34 H 1.08996 * 109.47071 * 224.97898 * 16 15 14 35 35 H 0.96711 * 113.99804 * 299.99635 * 17 16 15 36 36 H 1.48505 * 109.99955 * 179.97438 * 18 16 15 37 37 H 1.48501 * 109.99712 * 301.31548 * 18 16 15 38 38 H 1.07990 * 120.12371 * 359.97438 * 20 19 15 39 39 H 1.08001 * 119.73200 * 180.02562 * 21 20 19 40 40 H 1.07997 * 119.66858 * 179.97438 * 22 21 20 41 41 H 1.07993 * 120.11090 * 180.02562 * 23 22 21 42 42 H 1.08996 * 113.60949 * 89.11592 * 25 7 6 43 43 H 1.09001 * 113.61595 * 220.01845 * 25 7 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 7 0.0000 0.0000 0.0000 2 6 1.1359 0.0000 0.0000 3 6 2.6079 0.0007 0.0000 4 6 3.1186 -1.2702 0.6818 5 1 2.5763 -1.5065 1.5974 6 6 4.6474 -1.3109 0.8433 7 6 4.5681 -2.8012 0.4726 8 1 4.4236 -3.4576 1.3307 9 7 5.6520 -3.2454 -0.4072 10 6 6.0229 -4.5412 -0.4181 11 8 5.4627 -5.3384 0.3040 12 6 7.1374 -4.9982 -1.3236 13 7 7.3474 -6.4379 -1.1512 14 6 8.2723 -7.0029 -0.3160 15 6 8.2036 -8.3411 -0.3954 16 6 9.0509 -9.3289 0.3646 17 8 8.2749 -9.9161 1.4111 18 14 10.5204 -8.4505 1.0992 19 6 7.1488 -8.6594 -1.3608 20 6 6.6171 -9.8497 -1.8598 21 6 5.6070 -9.8084 -2.7795 22 6 5.1056 -8.5923 -3.2221 23 6 5.6159 -7.4055 -2.7428 24 6 6.6393 -7.4238 -1.8011 25 6 3.2666 -2.4653 -0.2746 26 1 2.9709 0.8744 0.5414 27 1 2.9712 0.0331 -1.0272 28 1 4.9834 -1.1323 1.8648 29 1 5.1815 -0.7064 0.1103 30 1 6.1027 -2.6071 -0.9820 31 1 6.8712 -4.7918 -2.3603 32 1 8.0534 -4.4643 -1.0705 33 1 8.9564 -6.4535 0.3138 34 1 9.3958 -10.1093 -0.3137 35 1 7.9344 -9.2784 2.0535 36 1 11.3638 -9.4137 1.8519 37 1 11.3182 -7.8086 0.0237 38 1 7.0024 -10.7997 -1.5204 39 1 5.1956 -10.7296 -3.1650 40 1 4.3075 -8.5759 -3.9496 41 1 5.2188 -6.4642 -3.0930 42 1 3.4221 -2.1762 -1.3139 43 1 2.4880 -3.2188 -0.1557 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16663504_9818708.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:26:19 Heat of formation + Delta-G solvation = 54.973051 kcal Electronic energy + Delta-G solvation = -26599.310349 eV Core-core repulsion = 22805.745345 eV Total energy + Delta-G solvation = -3793.565004 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 326.142 amu Computer time = 0.85 seconds Orbital eigenvalues (eV) -42.49735 -41.32088 -39.76135 -37.98808 -37.56427 -37.38895 -34.98670 -34.00453 -31.72248 -31.07480 -30.12415 -28.91808 -26.99933 -25.94336 -24.46526 -23.53858 -22.52783 -21.79062 -20.98563 -20.54795 -18.98152 -18.53223 -18.42746 -17.69840 -17.34494 -16.93319 -16.61309 -16.39195 -16.32300 -15.90652 -15.66522 -15.48063 -15.24082 -14.85071 -14.63161 -14.57688 -14.32165 -13.99744 -13.96198 -13.86690 -13.74147 -13.55872 -13.29776 -13.10234 -12.78360 -12.60481 -12.45953 -12.34192 -12.11655 -12.01655 -11.88023 -11.68169 -11.58945 -11.09635 -10.42544 -10.25573 -10.21233 -9.03056 -8.53459 -5.01998 0.27039 0.78765 1.34441 1.38145 1.40165 1.67080 1.72543 1.74962 1.79949 2.03065 2.11095 2.82180 3.10496 3.17201 3.33269 3.43168 3.45294 3.57029 3.59759 3.65351 3.75717 3.79480 3.85153 4.01581 4.07912 4.15946 4.30749 4.33066 4.36359 4.40286 4.51339 4.57040 4.57505 4.70662 4.74402 4.78646 4.81370 4.89717 4.97863 5.00259 5.24681 5.31029 5.63907 5.80029 5.85437 5.89324 6.13034 6.29912 6.35786 6.57285 6.78002 6.97056 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 N -0.432 5.432 2 C 0.201 3.799 3 C -0.014 4.014 4 C -0.106 4.106 5 H 0.104 0.896 6 C -0.136 4.136 7 C 0.123 3.877 8 H 0.118 0.882 9 N -0.719 5.719 10 C 0.492 3.508 11 O -0.512 6.512 12 C 0.091 3.909 13 N -0.466 5.466 14 C 0.068 3.932 15 C -0.197 4.197 16 C -0.030 4.030 17 O -0.542 6.542 18 Si 0.683 3.317 19 C -0.087 4.087 20 C -0.066 4.066 21 C -0.146 4.146 22 C -0.097 4.097 23 C -0.128 4.128 24 C 0.109 3.891 25 C -0.151 4.151 26 H 0.114 0.886 27 H 0.110 0.890 28 H 0.083 0.917 29 H 0.094 0.906 30 H 0.403 0.597 31 H 0.117 0.883 32 H 0.123 0.877 33 H 0.171 0.829 34 H 0.110 0.890 35 H 0.377 0.623 36 H -0.255 1.255 37 H -0.256 1.256 38 H 0.122 0.878 39 H 0.123 0.877 40 H 0.125 0.875 41 H 0.114 0.886 42 H 0.091 0.909 43 H 0.075 0.925 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 5.448 7.614 -0.941 9.410 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 N -0.109 5.109 2 C -0.117 4.117 3 C -0.054 4.054 4 C -0.127 4.127 5 H 0.122 0.878 6 C -0.175 4.175 7 C 0.019 3.981 8 H 0.136 0.864 9 N -0.372 5.372 10 C 0.276 3.724 11 O -0.385 6.385 12 C -0.036 4.036 13 N -0.150 5.150 14 C -0.056 4.056 15 C -0.205 4.205 16 C -0.141 4.141 17 O -0.347 6.347 18 Si 0.585 3.415 19 C -0.091 4.091 20 C -0.084 4.084 21 C -0.165 4.165 22 C -0.116 4.116 23 C -0.149 4.149 24 C 0.005 3.995 25 C -0.190 4.190 26 H 0.132 0.868 27 H 0.128 0.872 28 H 0.102 0.898 29 H 0.113 0.887 30 H 0.237 0.763 31 H 0.135 0.865 32 H 0.141 0.859 33 H 0.188 0.812 34 H 0.127 0.873 35 H 0.224 0.776 36 H -0.179 1.179 37 H -0.180 1.180 38 H 0.140 0.860 39 H 0.141 0.859 40 H 0.143 0.857 41 H 0.132 0.868 42 H 0.109 0.891 43 H 0.094 0.906 Dipole moment (debyes) X Y Z Total from point charges 4.348 6.857 -0.730 8.152 hybrid contribution 0.227 0.207 -0.818 0.874 sum 4.575 7.064 -1.549 8.557 Atomic orbital electron populations 1.81300 1.13150 1.08140 1.08287 1.29176 0.95313 0.93590 0.93622 1.19288 0.81779 1.00256 1.04074 1.22345 0.96504 0.93787 1.00029 0.87803 1.23406 0.95209 0.95395 1.03453 1.22509 0.86131 0.95353 0.94156 0.86421 1.45935 1.37848 1.09100 1.44268 1.21049 0.84680 0.82747 0.83950 1.90818 1.54310 1.52839 1.40535 1.21606 0.99687 0.80770 1.01501 1.43204 1.30996 1.03611 1.37175 1.21503 0.94947 0.92934 0.96242 1.20652 1.02655 0.93004 1.04200 1.24334 1.00511 0.98382 0.90886 1.86494 1.72172 1.37361 1.38682 0.95258 0.77353 0.84657 0.84279 1.18950 0.98399 0.92301 0.99477 1.20310 0.95693 0.96635 0.95787 1.20674 0.98451 0.97923 0.99442 1.20826 0.99482 0.91618 0.99660 1.19947 0.97346 0.98706 0.98857 1.18157 0.96444 0.87305 0.97621 1.23638 0.98195 0.97876 0.99293 0.86827 0.87224 0.89835 0.88749 0.76253 0.86515 0.85867 0.81196 0.87271 0.77553 1.17914 1.18044 0.85982 0.85948 0.85744 0.86759 0.89089 0.90604 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 N -0.43 -1.64 18.54 42.15 0.78 -0.86 16 2 C 0.20 -0.11 15.42 -20.76 -0.32 -0.43 16 3 C -0.01 0.08 5.54 -29.52 -0.16 -0.08 16 4 C -0.11 0.57 3.62 -89.81 -0.32 0.25 16 5 H 0.10 -0.46 8.12 -51.93 -0.42 -0.88 16 6 C -0.14 0.89 7.39 -25.92 -0.19 0.70 16 7 C 0.12 -0.49 4.24 -67.12 -0.28 -0.77 16 8 H 0.12 -0.18 7.46 -51.93 -0.39 -0.56 16 9 N -0.72 3.41 5.35 -53.02 -0.28 3.12 16 10 C 0.49 -0.74 7.90 -10.98 -0.09 -0.82 16 11 O -0.51 -1.93 16.02 5.56 0.09 -1.84 16 12 C 0.09 -0.32 6.48 -5.19 -0.03 -0.36 16 13 N -0.47 -0.26 2.27 -115.70 -0.26 -0.52 16 14 C 0.07 0.01 9.89 -16.73 -0.17 -0.15 16 15 C -0.20 -0.42 5.57 -102.71 -0.57 -0.99 16 16 C -0.03 -0.04 3.06 36.01 0.11 0.07 16 17 O -0.54 -1.18 12.88 -35.23 -0.45 -1.64 16 18 Si 0.68 -0.53 30.75 -169.99 -5.23 -5.76 16 19 C -0.09 -0.36 6.35 -105.13 -0.67 -1.02 16 20 C -0.07 -0.25 10.05 -39.65 -0.40 -0.65 16 21 C -0.15 -0.40 9.97 -39.94 -0.40 -0.79 16 22 C -0.10 -0.21 10.01 -39.54 -0.40 -0.61 16 23 C -0.13 -0.30 10.00 -39.43 -0.39 -0.69 16 24 C 0.11 0.34 6.80 -83.99 -0.57 -0.23 16 25 C -0.15 0.61 7.43 -25.91 -0.19 0.42 16 26 H 0.11 -0.87 8.14 -51.93 -0.42 -1.29 16 27 H 0.11 -0.84 7.84 -51.93 -0.41 -1.25 16 28 H 0.08 -0.53 8.14 -51.93 -0.42 -0.95 16 29 H 0.09 -0.78 8.08 -51.93 -0.42 -1.20 16 30 H 0.40 -3.23 8.73 -40.82 -0.36 -3.59 16 31 H 0.12 -0.64 8.14 -51.93 -0.42 -1.06 16 32 H 0.12 -0.86 8.12 -51.93 -0.42 -1.28 16 33 H 0.17 -0.60 6.35 -52.49 -0.33 -0.93 16 34 H 0.11 0.21 7.96 -51.93 -0.41 -0.21 16 35 H 0.38 -0.50 8.70 45.56 0.40 -0.10 16 36 H -0.25 -0.65 7.11 56.52 0.40 -0.25 16 37 H -0.26 -0.31 7.11 56.52 0.40 0.09 16 38 H 0.12 0.36 8.06 -52.49 -0.42 -0.07 16 39 H 0.12 0.10 8.06 -52.49 -0.42 -0.32 16 40 H 0.12 0.01 8.06 -52.49 -0.42 -0.42 16 41 H 0.11 0.03 8.06 -52.49 -0.42 -0.39 16 42 H 0.09 -0.46 7.90 -51.93 -0.41 -0.87 16 43 H 0.08 -0.13 8.14 -51.93 -0.42 -0.56 16 LS Contribution 373.79 15.07 5.63 5.63 Total: 0.00 -13.60 373.79 -10.53 -24.13 By element: Atomic # 1 Polarization: -10.33 SS G_CDS: -5.75 Total: -16.08 kcal Atomic # 6 Polarization: -1.13 SS G_CDS: -5.05 Total: -6.18 kcal Atomic # 7 Polarization: 1.51 SS G_CDS: 0.23 Total: 1.74 kcal Atomic # 8 Polarization: -3.12 SS G_CDS: -0.36 Total: -3.48 kcal Atomic # 14 Polarization: -0.53 SS G_CDS: -5.23 Total: -5.76 kcal Total LS contribution 5.63 Total: 5.63 kcal Total: -13.60 -10.53 -24.13 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16663504_9818708.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.101 kcal (2) G-P(sol) polarization free energy of solvation -13.598 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 65.502 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.529 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.128 kcal (6) G-S(sol) free energy of system = (1) + (5) 54.973 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.85 seconds