Wall clock time and date at job start Tue Mar 9 2021 12:53:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34230 * 116.99824 * 2 1 4 4 O 1.20824 * 119.99990 * 359.97438 * 3 2 1 5 5 C 1.50704 * 119.99914 * 179.97438 * 3 2 1 6 6 H 1.08994 * 112.84883 * 311.19658 * 5 3 2 7 7 C 1.54053 * 113.61881 * 82.50498 * 5 3 2 8 8 C 1.53777 * 86.98563 * 139.97747 * 7 5 3 9 9 H 1.08997 * 113.61343 * 219.98246 * 8 7 5 10 10 N 1.46502 * 113.61341 * 89.16403 * 8 7 5 11 11 C 1.35316 * 125.86870 * 345.85605 * 10 8 7 12 12 C 1.35352 * 106.17433 * 180.02562 * 11 10 8 13 13 C 1.50700 * 126.74876 * 180.02562 * 12 11 10 14 14 N 1.46507 * 109.46768 * 95.00279 * 13 12 11 15 15 C 1.34776 * 119.99696 * 180.02562 * 14 13 12 16 16 O 1.21624 * 120.00129 * 359.97438 * 15 14 13 17 17 C 1.47260 * 119.99828 * 180.02562 * 15 14 13 18 18 C 1.36774 * 126.94303 * 359.97377 * 17 15 14 19 19 N 1.34657 * 108.39462 * 180.02562 * 18 17 15 20 20 C 1.46504 * 124.84590 * 179.97438 * 19 18 17 21 21 C 1.36445 * 110.30293 * 359.97438 * 19 18 17 22 22 C 1.50699 * 125.57486 * 180.02562 * 21 19 18 23 23 O 1.42907 * 109.46603 * 30.00272 * 22 21 19 24 24 Si 1.86298 * 109.47032 * 149.99575 * 22 21 19 25 25 C 1.34486 * 108.85443 * 0.26315 * 21 19 18 26 26 N 1.33767 * 106.49478 * 0.26603 * 12 11 10 27 27 N 1.28630 * 108.88937 * 359.56282 * 26 12 11 28 28 C 1.53782 * 87.17483 * 334.57141 * 8 7 5 29 29 H 1.08999 * 109.47182 * 59.99980 * 1 2 3 30 30 H 1.08998 * 109.47234 * 180.02562 * 1 2 3 31 31 H 1.09004 * 109.46916 * 300.00244 * 1 2 3 32 32 H 1.09003 * 113.60977 * 25.46880 * 7 5 3 33 33 H 1.08997 * 113.69630 * 254.49523 * 7 5 3 34 34 H 1.08004 * 126.90908 * 0.06838 * 11 10 8 35 35 H 1.09004 * 109.47191 * 335.00538 * 13 12 11 36 36 H 1.08990 * 109.46938 * 215.00394 * 13 12 11 37 37 H 0.96999 * 119.99991 * 0.02562 * 14 13 12 38 38 H 1.07996 * 125.80109 * 0.02562 * 18 17 15 39 39 H 1.08997 * 109.46851 * 270.01794 * 20 19 18 40 40 H 1.08994 * 109.47116 * 30.02298 * 20 19 18 41 41 H 1.09003 * 109.46970 * 150.02113 * 20 19 18 42 42 H 1.08996 * 109.47117 * 270.00185 * 22 21 19 43 43 H 0.96697 * 114.00527 * 59.99993 * 23 22 21 44 44 H 1.48506 * 109.99834 * 58.68765 * 24 22 21 45 45 H 1.48502 * 110.00011 * 180.02562 * 24 22 21 46 46 H 1.07997 * 126.83678 * 179.73316 * 25 21 19 47 47 H 1.08992 * 113.61824 * 140.02451 * 28 8 7 48 48 H 1.09003 * 113.61184 * 270.84544 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5664 1.2749 0.0006 6 1 4.0233 0.6366 0.7567 7 6 4.1929 1.1231 -1.3986 8 6 5.1814 2.2267 -0.9866 9 1 5.3978 2.9386 -1.7831 10 7 6.3906 1.7179 -0.3344 11 6 6.5620 0.4673 0.1531 12 6 7.8145 0.4306 0.6650 13 6 8.4842 -0.7465 1.3260 14 7 9.2872 -1.4701 0.3371 15 6 9.9801 -2.5664 0.7037 16 8 9.9392 -2.9547 1.8556 17 6 10.7877 -3.2935 -0.2902 18 6 10.9352 -2.9845 -1.6144 19 7 11.7536 -3.8953 -2.1746 20 6 12.1556 -3.9050 -3.5834 21 6 12.1551 -4.8076 -1.2429 22 6 13.0744 -5.9743 -1.4975 23 8 13.9835 -5.6435 -2.5494 24 14 14.0326 -6.3597 0.0529 25 6 11.5920 -4.4987 -0.0613 26 7 8.3389 1.6462 0.4734 27 7 7.4722 2.3838 -0.1261 28 6 4.1078 2.7143 0.0005 29 1 -0.3633 0.5138 -0.8900 30 1 -0.3633 -1.0276 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 3.5258 1.4149 -2.2097 33 1 4.6643 0.1545 -1.5647 34 1 5.8441 -0.3394 0.1365 35 1 7.7255 -1.4131 1.7361 36 1 9.1298 -0.3929 2.1298 37 1 9.3200 -1.1602 -0.5815 38 1 10.4736 -2.1517 -2.1240 39 1 11.4442 -4.4961 -4.1601 40 1 12.1720 -2.8837 -3.9636 41 1 13.1498 -4.3427 -3.6745 42 1 12.4854 -6.8446 -1.7866 43 1 14.5413 -4.8766 -2.3606 44 1 13.0975 -6.6743 1.1629 45 1 14.9435 -7.5082 -0.1852 46 1 11.7101 -5.0308 0.8710 47 1 4.5104 3.0294 0.9631 48 1 3.4183 3.4415 -0.4285 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16723000_13287730.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:21 Heat of formation + Delta-G solvation = 46.200523 kcal Electronic energy + Delta-G solvation = -33279.156636 eV Core-core repulsion = 28534.145923 eV Total energy + Delta-G solvation = -4745.010713 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 376.163 amu Computer time = 1.34 seconds Orbital eigenvalues (eV) -44.57544 -42.45246 -42.03500 -40.12112 -39.89054 -37.90343 -37.55851 -36.06924 -34.11102 -33.78876 -32.59048 -31.34585 -29.80567 -28.47779 -27.69474 -27.48875 -27.03451 -26.04478 -24.44659 -23.56034 -22.55153 -22.31661 -21.06930 -20.83438 -20.52801 -19.29384 -19.08229 -18.23333 -18.02694 -17.71150 -17.44512 -17.31415 -16.92744 -16.80317 -16.55352 -16.25299 -15.92142 -15.82020 -15.62329 -15.40963 -15.32430 -14.94893 -14.65619 -14.43418 -14.25896 -14.19711 -14.01284 -13.90520 -13.77014 -13.56883 -13.42994 -13.34084 -13.12803 -13.05830 -12.69696 -12.48246 -12.24823 -12.19215 -11.95482 -11.94625 -11.94015 -11.60065 -11.22898 -10.90331 -10.76196 -10.34659 -10.00873 -9.53623 -9.19758 -4.99271 0.36499 0.79339 0.90979 1.00105 1.06165 1.24890 1.41407 1.47198 1.66093 1.87581 2.05733 2.44387 2.54391 2.73106 2.74752 2.94972 3.13160 3.14748 3.32993 3.54251 3.57228 3.69730 3.79372 3.81358 3.82908 3.84221 3.97529 4.02633 4.09960 4.11273 4.16182 4.18327 4.23229 4.34888 4.37288 4.43917 4.46660 4.47939 4.57905 4.58614 4.67875 4.85216 4.93614 4.98797 5.01681 5.18690 5.40281 5.46546 5.70522 5.98124 6.15958 6.30189 6.50746 6.66492 7.38811 7.47939 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.356 6.356 3 C 0.472 3.528 4 O -0.499 6.499 5 C -0.118 4.118 6 H 0.130 0.870 7 C -0.121 4.121 8 C 0.114 3.886 9 H 0.137 0.863 10 N -0.276 5.276 11 C -0.032 4.032 12 C -0.039 4.039 13 C 0.211 3.789 14 N -0.727 5.727 15 C 0.594 3.406 16 O -0.540 6.540 17 C -0.225 4.225 18 C 0.051 3.949 19 N -0.423 5.423 20 C 0.049 3.951 21 C -0.021 4.021 22 C -0.042 4.042 23 O -0.543 6.543 24 Si 0.716 3.284 25 C -0.135 4.135 26 N -0.249 5.249 27 N -0.072 5.072 28 C -0.120 4.120 29 H 0.065 0.935 30 H 0.105 0.895 31 H 0.065 0.935 32 H 0.120 0.880 33 H 0.099 0.901 34 H 0.193 0.807 35 H 0.088 0.912 36 H 0.089 0.911 37 H 0.398 0.602 38 H 0.169 0.831 39 H 0.072 0.928 40 H 0.081 0.919 41 H 0.114 0.886 42 H 0.118 0.882 43 H 0.381 0.619 44 H -0.250 1.250 45 H -0.252 1.252 46 H 0.152 0.848 47 H 0.093 0.907 48 H 0.126 0.874 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.085 -0.500 -6.304 6.659 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.272 6.272 3 C 0.314 3.686 4 O -0.385 6.385 5 C -0.137 4.137 6 H 0.148 0.852 7 C -0.159 4.159 8 C 0.012 3.988 9 H 0.155 0.845 10 N -0.068 5.068 11 C -0.183 4.183 12 C -0.177 4.177 13 C 0.086 3.914 14 N -0.380 5.380 15 C 0.383 3.617 16 O -0.418 6.418 17 C -0.236 4.236 18 C -0.085 4.085 19 N -0.098 5.098 20 C -0.092 4.092 21 C -0.130 4.130 22 C -0.153 4.153 23 O -0.348 6.348 24 Si 0.615 3.385 25 C -0.159 4.159 26 N -0.116 5.116 27 N -0.051 5.051 28 C -0.158 4.158 29 H 0.084 0.916 30 H 0.123 0.877 31 H 0.084 0.916 32 H 0.138 0.862 33 H 0.118 0.882 34 H 0.210 0.790 35 H 0.106 0.894 36 H 0.108 0.892 37 H 0.232 0.768 38 H 0.186 0.814 39 H 0.091 0.909 40 H 0.100 0.900 41 H 0.132 0.868 42 H 0.135 0.865 43 H 0.229 0.771 44 H -0.174 1.174 45 H -0.177 1.177 46 H 0.170 0.830 47 H 0.112 0.888 48 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -1.642 -0.251 -5.649 5.888 hybrid contribution -1.729 -0.657 -0.868 2.043 sum -3.371 -0.908 -6.518 7.394 Atomic orbital electron populations 1.23367 0.75506 1.04240 1.02874 1.86507 1.24048 1.32997 1.83674 1.23277 0.91233 0.81657 0.72466 1.90713 1.66796 1.36390 1.44650 1.22784 0.88743 1.01113 1.01051 0.85211 1.23406 0.96538 0.99848 0.96102 1.22505 0.80738 0.98688 0.96916 0.84491 1.47128 1.12422 1.08795 1.38468 1.23446 1.00524 0.90301 1.04048 1.21908 0.93443 0.95824 1.06500 1.19335 0.94406 0.87451 0.90206 1.45792 1.50055 1.28953 1.13212 1.17338 0.78086 0.79105 0.87203 1.90800 1.64086 1.67306 1.19584 1.20251 1.08731 1.01659 0.92925 1.21925 0.97080 0.96069 0.93421 1.43480 1.35759 1.21395 1.09159 1.22571 1.04485 1.03965 0.78138 1.20746 1.05931 0.96988 0.89319 1.24838 0.92567 0.95588 1.02268 1.86445 1.52859 1.53338 1.42199 0.94024 0.83260 0.86042 0.75153 1.21725 1.00119 0.97089 0.96987 1.75185 1.22368 1.01739 1.12308 1.78446 0.90173 1.20526 1.15916 1.23405 0.95842 0.95356 1.01205 0.91595 0.87654 0.91584 0.86168 0.88230 0.78969 0.89387 0.89247 0.76787 0.81372 0.90897 0.90003 0.86762 0.86516 0.77070 1.17443 1.17698 0.83007 0.88841 0.85548 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.07 10.56 101.05 1.07 0.99 16 2 O -0.36 0.24 10.57 -39.26 -0.41 -0.18 16 3 C 0.47 -0.27 7.49 36.01 0.27 0.00 16 4 O -0.50 -1.22 15.65 -18.75 -0.29 -1.51 16 5 C -0.12 0.43 3.83 -90.81 -0.35 0.08 16 6 H 0.13 -0.60 6.88 -51.93 -0.36 -0.96 16 7 C -0.12 0.65 6.90 -25.78 -0.18 0.48 16 8 C 0.11 -0.44 5.10 -67.12 -0.34 -0.79 16 9 H 0.14 -0.67 8.14 -51.93 -0.42 -1.09 16 10 N -0.28 0.33 3.52 -53.97 -0.19 0.14 16 11 C -0.03 0.07 9.61 -17.04 -0.16 -0.10 16 12 C -0.04 -0.01 6.61 -82.78 -0.55 -0.56 16 13 C 0.21 0.08 6.23 -5.19 -0.03 0.05 16 14 N -0.73 -0.33 5.54 -62.61 -0.35 -0.67 16 15 C 0.59 2.05 7.81 -12.59 -0.10 1.95 16 16 O -0.54 -3.98 16.97 5.26 0.09 -3.89 16 17 C -0.23 -0.48 6.29 -103.35 -0.65 -1.13 16 18 C 0.05 -0.03 10.83 -16.84 -0.18 -0.21 16 19 N -0.42 0.33 3.09 -119.90 -0.37 -0.04 16 20 C 0.05 -0.16 10.71 59.85 0.64 0.48 16 21 C -0.02 -0.01 6.13 -81.87 -0.50 -0.51 16 22 C -0.04 0.04 2.98 36.01 0.11 0.15 16 23 O -0.54 1.05 9.95 -35.23 -0.35 0.70 16 24 Si 0.72 -0.83 31.30 -169.99 -5.32 -6.15 16 25 C -0.13 -0.31 9.49 -37.50 -0.36 -0.67 16 26 N -0.25 -0.81 12.41 33.29 0.41 -0.39 16 27 N -0.07 -0.17 13.16 60.35 0.79 0.62 16 28 C -0.12 0.39 7.20 -25.92 -0.19 0.21 16 29 H 0.07 -0.14 8.13 -51.93 -0.42 -0.57 16 30 H 0.11 -0.45 8.14 -51.93 -0.42 -0.87 16 31 H 0.07 -0.12 8.13 -51.93 -0.42 -0.54 16 32 H 0.12 -0.73 8.10 -51.93 -0.42 -1.16 16 33 H 0.10 -0.64 7.06 -51.93 -0.37 -1.00 16 34 H 0.19 -1.04 6.70 -52.48 -0.35 -1.39 16 35 H 0.09 -0.05 8.14 -51.93 -0.42 -0.47 16 36 H 0.09 0.17 8.14 -51.93 -0.42 -0.26 16 37 H 0.40 -0.63 7.41 -40.82 -0.30 -0.93 16 38 H 0.17 -0.62 7.45 -52.49 -0.39 -1.01 16 39 H 0.07 -0.23 8.14 -51.93 -0.42 -0.65 16 40 H 0.08 -0.40 8.13 -51.93 -0.42 -0.82 16 41 H 0.11 -0.42 4.93 -51.93 -0.26 -0.68 16 42 H 0.12 -0.07 7.96 -51.93 -0.41 -0.48 16 43 H 0.38 -2.04 8.38 45.56 0.38 -1.66 16 44 H -0.25 -0.41 6.77 56.52 0.38 -0.03 16 45 H -0.25 -0.38 7.11 56.52 0.40 0.02 16 46 H 0.15 0.41 6.68 -52.49 -0.35 0.06 16 47 H 0.09 -0.21 8.14 -51.93 -0.42 -0.63 16 48 H 0.13 -0.39 7.44 -51.93 -0.39 -0.78 16 LS Contribution 406.06 15.07 6.12 6.12 Total: 0.00 -13.13 406.06 -7.61 -20.74 By element: Atomic # 1 Polarization: -9.66 SS G_CDS: -6.23 Total: -15.89 kcal Atomic # 6 Polarization: 1.92 SS G_CDS: -1.50 Total: 0.42 kcal Atomic # 7 Polarization: -0.65 SS G_CDS: 0.30 Total: -0.35 kcal Atomic # 8 Polarization: -3.92 SS G_CDS: -0.97 Total: -4.88 kcal Atomic # 14 Polarization: -0.83 SS G_CDS: -5.32 Total: -6.15 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -13.13 -7.61 -20.74 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16723000_13287730.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 66.939 kcal (2) G-P(sol) polarization free energy of solvation -13.131 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.808 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.607 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.738 kcal (6) G-S(sol) free energy of system = (1) + (5) 46.201 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.34 seconds