Wall clock time and date at job start Tue Mar 9 2021 12:54:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45192 * 1 3 3 C 1.34229 * 117.00207 * 2 1 4 4 O 1.20821 * 119.99821 * 359.97438 * 3 2 1 5 5 C 1.50702 * 119.99926 * 179.97438 * 3 2 1 6 6 H 1.08994 * 112.91064 * 48.75165 * 5 3 2 7 7 C 1.53787 * 113.61150 * 180.02562 * 5 3 2 8 8 C 1.53779 * 87.07963 * 139.98062 * 7 5 3 9 9 H 1.08999 * 113.61062 * 219.93155 * 8 7 5 10 10 N 1.46502 * 113.61301 * 89.11687 * 8 7 5 11 11 C 1.35312 * 125.86848 * 274.99192 * 10 8 7 12 12 C 1.35347 * 106.17695 * 180.02562 * 11 10 8 13 13 C 1.50700 * 126.74896 * 180.02562 * 12 11 10 14 14 N 1.46507 * 109.46728 * 95.00796 * 13 12 11 15 15 C 1.34770 * 119.99759 * 179.97438 * 14 13 12 16 16 O 1.21658 * 120.00634 * 359.97438 * 15 14 13 17 17 C 1.47051 * 119.99750 * 179.97438 * 15 14 13 18 18 C 1.36226 * 123.48896 * 180.02562 * 17 15 14 19 19 Cl 1.73600 * 124.60972 * 0.02562 * 18 17 15 20 20 S 1.70448 * 110.78760 * 180.02562 * 18 17 15 21 21 C 1.75496 * 92.46568 * 359.97438 * 20 18 17 22 22 C 1.50701 * 124.68572 * 180.02562 * 21 20 18 23 23 O 1.42894 * 109.47104 * 119.97764 * 22 21 20 24 24 Si 1.86296 * 109.47069 * 359.97438 * 22 21 20 25 25 C 1.32695 * 110.62965 * 359.71675 * 21 20 18 26 26 N 1.33768 * 106.49816 * 0.02562 * 12 11 10 27 27 N 1.28634 * 108.88550 * 359.73697 * 26 12 11 28 28 C 1.53779 * 87.08402 * 334.56577 * 8 7 5 29 29 H 1.09000 * 109.47738 * 299.99919 * 1 2 3 30 30 H 1.09002 * 109.46921 * 60.00622 * 1 2 3 31 31 H 1.09002 * 109.47224 * 179.97438 * 1 2 3 32 32 H 1.08997 * 113.61028 * 254.53022 * 7 5 3 33 33 H 1.08998 * 113.61447 * 25.34557 * 7 5 3 34 34 H 1.08005 * 126.90798 * 359.97438 * 11 10 8 35 35 H 1.09000 * 109.47214 * 215.00315 * 13 12 11 36 36 H 1.08998 * 109.47616 * 335.00999 * 13 12 11 37 37 H 0.96998 * 120.00299 * 359.97438 * 14 13 12 38 38 H 1.08997 * 109.47202 * 239.97597 * 22 21 20 39 39 H 0.96701 * 114.00481 * 300.00014 * 23 22 21 40 40 H 1.48507 * 110.00118 * 58.68032 * 24 22 21 41 41 H 1.48496 * 110.00058 * 179.97438 * 24 22 21 42 42 H 1.07999 * 123.45195 * 180.27033 * 25 21 20 43 43 H 1.09002 * 113.61557 * 270.88569 * 28 8 7 44 44 H 1.09004 * 113.61501 * 139.97990 * 28 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4519 0.0000 0.0000 3 6 2.0613 1.1960 0.0000 4 8 1.4033 2.2093 -0.0005 5 6 3.5663 1.2748 0.0006 6 1 4.0249 0.6358 -0.7539 7 6 4.1078 2.7142 0.0011 8 6 5.1806 2.2265 0.9890 9 1 5.3964 2.9384 1.7857 10 7 6.3902 1.7177 0.3376 11 6 6.5726 0.4588 -0.1236 12 6 7.8214 0.4252 -0.6444 13 6 8.4993 -0.7582 -1.2857 14 7 8.3165 -0.6977 -2.7381 15 6 8.8413 -1.6587 -3.5238 16 8 9.4672 -2.5761 -3.0273 17 6 8.6573 -1.5983 -4.9815 18 6 9.1557 -2.5300 -5.8413 19 17 10.0760 -3.9217 -5.3619 20 16 8.7529 -2.1438 -7.4518 21 6 7.8910 -0.6935 -6.9684 22 6 7.2024 0.2518 -7.9188 23 8 5.8107 0.3167 -7.6012 24 14 7.4130 -0.3608 -9.6654 25 6 7.9237 -0.5479 -5.6498 26 7 8.3354 1.6489 -0.4781 27 7 7.4607 2.3926 0.1020 28 6 4.1906 1.1231 1.3978 29 1 -0.3634 0.5138 0.8900 30 1 -0.3633 0.5137 -0.8901 31 1 -0.3634 -1.0277 -0.0005 32 1 4.5111 3.0292 -0.9612 33 1 3.4165 3.4405 0.4286 34 1 5.8643 -0.3557 -0.0834 35 1 9.5638 -0.7375 -1.0523 36 1 8.0611 -1.6797 -0.9025 37 1 7.8178 0.0340 -3.1341 38 1 7.6428 1.2446 -7.8264 39 1 5.3532 -0.5330 -7.6626 40 1 6.8450 -1.7267 -9.7966 41 1 6.7379 0.5625 -10.6124 42 1 7.4535 0.2736 -5.1298 43 1 3.5226 1.4143 2.2085 44 1 4.6609 0.1537 1.5630 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) Cl: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16723000_13431040.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:13 Heat of formation + Delta-G solvation = 20.524698 kcal Electronic energy + Delta-G solvation = -33753.336394 eV Core-core repulsion = 28829.302137 eV Total energy + Delta-G solvation = -4924.034257 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 413.069 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -44.53851 -41.93179 -41.02712 -39.81519 -38.98771 -38.00617 -37.52661 -37.03256 -36.30237 -34.06968 -32.54749 -31.64512 -29.65769 -28.51087 -27.46609 -27.05536 -26.83586 -25.13652 -24.36361 -22.57759 -22.24262 -22.19350 -20.87403 -20.62227 -19.44783 -19.10494 -18.31400 -18.07624 -17.92789 -17.68184 -17.58396 -17.29264 -16.71979 -16.59771 -16.29841 -16.00056 -15.78289 -15.71373 -15.40758 -15.19924 -14.74905 -14.70715 -14.54402 -14.35805 -14.14043 -13.94625 -13.83722 -13.78366 -13.64905 -13.34115 -12.95720 -12.95210 -12.70578 -12.57841 -12.48218 -12.25736 -12.12708 -12.00343 -11.87724 -11.85566 -11.81316 -11.53292 -11.17936 -11.03456 -10.77672 -10.37286 -10.25930 -9.86901 -9.64278 -5.05202 -0.61824 -0.17788 0.44332 0.49667 0.71646 1.00486 1.04692 1.16350 1.18769 1.21790 1.53340 1.65194 1.89435 2.17768 2.34927 2.75136 3.04634 3.15388 3.24296 3.28180 3.47613 3.61088 3.67149 3.84027 3.89535 3.93103 3.98764 4.14587 4.19099 4.25035 4.28347 4.35174 4.46985 4.48205 4.52707 4.58967 4.63567 4.69766 4.70830 4.77805 4.85147 4.89052 4.95991 4.98217 5.25802 5.30797 5.55238 6.39182 6.41171 6.59825 7.09523 7.38063 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.359 6.359 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.114 4.114 6 H 0.146 0.854 7 C -0.119 4.119 8 C 0.110 3.890 9 H 0.146 0.854 10 N -0.267 5.267 11 C -0.009 4.009 12 C -0.052 4.052 13 C 0.215 3.785 14 N -0.706 5.706 15 C 0.575 3.425 16 O -0.554 6.554 17 C -0.166 4.166 18 C -0.137 4.137 19 Cl 0.006 6.994 20 S 0.269 5.731 21 C -0.226 4.226 22 C -0.031 4.031 23 O -0.536 6.536 24 Si 0.706 3.294 25 C -0.070 4.070 26 N -0.286 5.286 27 N -0.106 5.106 28 C -0.106 4.106 29 H 0.063 0.937 30 H 0.058 0.942 31 H 0.127 0.873 32 H 0.083 0.917 33 H 0.122 0.878 34 H 0.232 0.768 35 H 0.072 0.928 36 H 0.106 0.894 37 H 0.410 0.590 38 H 0.146 0.854 39 H 0.390 0.610 40 H -0.255 1.255 41 H -0.270 1.270 42 H 0.172 0.828 43 H 0.130 0.870 44 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -5.807 -1.249 -0.698 5.981 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.275 6.275 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.133 4.133 6 H 0.163 0.837 7 C -0.157 4.157 8 C 0.008 3.992 9 H 0.163 0.837 10 N -0.059 5.059 11 C -0.161 4.161 12 C -0.190 4.190 13 C 0.090 3.910 14 N -0.359 5.359 15 C 0.361 3.639 16 O -0.434 6.434 17 C -0.185 4.185 18 C -0.284 4.284 19 Cl 0.035 6.965 20 S 0.535 5.465 21 C -0.344 4.344 22 C -0.143 4.143 23 O -0.344 6.344 24 Si 0.608 3.392 25 C -0.098 4.098 26 N -0.153 5.153 27 N -0.084 5.084 28 C -0.144 4.144 29 H 0.082 0.918 30 H 0.077 0.923 31 H 0.146 0.854 32 H 0.101 0.899 33 H 0.140 0.860 34 H 0.249 0.751 35 H 0.091 0.909 36 H 0.124 0.876 37 H 0.246 0.754 38 H 0.163 0.837 39 H 0.240 0.760 40 H -0.180 1.180 41 H -0.195 1.195 42 H 0.189 0.811 43 H 0.148 0.852 44 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -4.790 -0.683 -2.143 5.292 hybrid contribution -2.056 -0.279 1.750 2.714 sum -6.846 -0.962 -0.394 6.924 Atomic orbital electron populations 1.23526 0.75004 1.05603 1.02470 1.86508 1.24694 1.32939 1.83390 1.23838 0.92255 0.81117 0.71182 1.90701 1.67815 1.37486 1.46476 1.22848 0.86696 1.01020 1.02707 0.83680 1.23354 0.95870 0.95720 1.00757 1.22712 0.79837 0.99795 0.96823 0.83668 1.47324 1.12615 1.08239 1.37767 1.23955 0.99771 0.90484 1.01905 1.21911 0.94444 0.95082 1.07604 1.19334 1.00195 0.93077 0.78360 1.45709 1.56202 1.27198 1.06796 1.17573 0.78772 0.81896 0.85664 1.90872 1.41571 1.35195 1.75731 1.20263 1.06349 0.97873 0.94025 1.25792 1.04146 0.96538 1.01880 1.98428 1.70177 1.36394 1.91505 1.83248 1.46974 1.17033 0.99273 1.24866 1.08558 1.02055 0.98902 1.24514 0.82177 1.02520 1.05085 1.86620 1.19689 1.37604 1.90489 0.94495 0.91717 0.79037 0.73980 1.21066 0.97849 0.97993 0.92921 1.75132 1.23093 1.03016 1.14050 1.78396 0.91498 1.21250 1.17297 1.23389 0.95562 1.00200 0.95289 0.91796 0.92271 0.85446 0.89861 0.85969 0.75127 0.90940 0.87626 0.75352 0.83700 0.76013 1.17975 1.19489 0.81063 0.85150 0.86274 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.13 10.56 113.37 1.20 1.06 16 2 O -0.36 0.96 10.56 -51.41 -0.54 0.42 16 3 C 0.47 -1.01 7.48 71.24 0.53 -0.48 16 4 O -0.54 -2.62 15.65 21.98 0.34 -2.28 16 5 C -0.11 1.04 3.85 -11.01 -0.04 1.00 16 6 H 0.15 -1.80 6.97 -2.39 -0.02 -1.82 16 7 C -0.12 0.88 7.20 31.12 0.22 1.10 16 8 C 0.11 -0.97 5.11 45.52 0.23 -0.74 16 9 H 0.15 -1.49 8.14 -2.39 -0.02 -1.51 16 10 N -0.27 0.89 3.52 -324.67 -1.14 -0.25 16 11 C -0.01 0.05 9.61 83.49 0.80 0.86 16 12 C -0.05 0.01 6.61 41.60 0.28 0.28 16 13 C 0.22 -0.04 6.23 85.63 0.53 0.49 16 14 N -0.71 0.07 5.53 -470.45 -2.60 -2.53 16 15 C 0.57 3.12 7.79 86.56 0.67 3.79 16 16 O -0.55 -6.89 14.91 -4.21 -0.06 -6.96 16 17 C -0.17 -0.42 5.98 -19.84 -0.12 -0.54 16 18 C -0.14 -0.47 6.87 67.35 0.46 -0.01 16 19 Cl 0.01 0.04 27.20 -2.72 -0.07 -0.03 16 20 S 0.27 -0.70 20.17 -56.49 -1.14 -1.84 16 21 C -0.23 0.94 5.68 24.52 0.14 1.08 16 22 C -0.03 0.18 2.95 71.24 0.21 0.39 16 23 O -0.54 1.89 12.84 -148.98 -1.91 -0.02 16 24 Si 0.71 -3.82 30.91 68.60 2.12 -1.70 16 25 C -0.07 0.20 9.71 22.70 0.22 0.42 16 26 N -0.29 -2.00 12.41 -48.60 -0.60 -2.60 16 27 N -0.11 -0.55 13.17 37.02 0.49 -0.07 16 28 C -0.11 1.38 6.88 31.12 0.21 1.59 16 29 H 0.06 -0.29 8.13 -2.39 -0.02 -0.31 16 30 H 0.06 -0.21 8.13 -2.39 -0.02 -0.23 16 31 H 0.13 -1.26 8.14 -2.39 -0.02 -1.28 16 32 H 0.08 -0.43 8.14 -2.39 -0.02 -0.45 16 33 H 0.12 -0.75 7.43 -2.39 -0.02 -0.77 16 34 H 0.23 -3.45 6.74 -2.91 -0.02 -3.47 16 35 H 0.07 0.28 8.14 -2.39 -0.02 0.26 16 36 H 0.11 -0.34 8.14 -2.39 -0.02 -0.36 16 37 H 0.41 -1.53 7.01 -92.71 -0.65 -2.18 16 38 H 0.15 -1.18 7.96 -2.39 -0.02 -1.20 16 39 H 0.39 -3.49 8.70 -74.06 -0.64 -4.13 16 40 H -0.25 0.58 7.11 99.48 0.71 1.29 16 41 H -0.27 -0.36 7.11 99.48 0.71 0.35 16 42 H 0.17 -1.12 7.10 -2.91 -0.02 -1.14 16 43 H 0.13 -1.85 8.09 -2.39 -0.02 -1.87 16 44 H 0.12 -1.93 6.98 -2.39 -0.02 -1.94 16 Total: 0.00 -28.60 407.55 0.28 -28.32 By element: Atomic # 1 Polarization: -20.61 SS G_CDS: -0.15 Total: -20.76 kcal Atomic # 6 Polarization: 4.74 SS G_CDS: 5.56 Total: 10.29 kcal Atomic # 7 Polarization: -1.58 SS G_CDS: -3.86 Total: -5.44 kcal Atomic # 8 Polarization: -6.66 SS G_CDS: -2.18 Total: -8.84 kcal Atomic # 14 Polarization: -3.82 SS G_CDS: 2.12 Total: -1.70 kcal Atomic # 16 Polarization: -0.70 SS G_CDS: -1.14 Total: -1.84 kcal Atomic # 17 Polarization: 0.04 SS G_CDS: -0.07 Total: -0.03 kcal Total: -28.60 0.28 -28.32 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16723000_13431040.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 48.843 kcal (2) G-P(sol) polarization free energy of solvation -28.603 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 20.240 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.318 kcal (6) G-S(sol) free energy of system = (1) + (5) 20.525 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds