Wall clock time and date at job start Tue Mar 9 2021 12:54:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45203 * 1 3 3 C 1.34230 * 117.00002 * 2 1 4 4 O 1.20818 * 120.00003 * 359.97438 * 3 2 1 5 5 C 1.50700 * 119.99874 * 180.02562 * 3 2 1 6 6 H 1.09000 * 112.85297 * 48.79861 * 5 3 2 7 7 C 1.53781 * 113.61460 * 179.97438 * 5 3 2 8 8 C 1.53780 * 87.08113 * 139.97875 * 7 5 3 9 9 H 1.09008 * 113.61663 * 219.93901 * 8 7 5 10 10 N 1.46499 * 113.61485 * 89.11541 * 8 7 5 11 11 C 1.35309 * 125.87027 * 276.55541 * 10 8 7 12 12 C 1.35353 * 106.17498 * 179.97438 * 11 10 8 13 13 C 1.50706 * 126.75076 * 179.97438 * 12 11 10 14 14 N 1.46499 * 109.46696 * 94.99878 * 13 12 11 15 15 C 1.34779 * 119.99924 * 179.97438 * 14 13 12 16 16 O 1.21284 * 120.00000 * 0.02562 * 15 14 13 17 17 C 1.50696 * 120.00299 * 179.97438 * 15 14 13 18 18 O 1.42904 * 109.47152 * 180.02562 * 17 15 14 19 19 C 1.35900 * 116.99763 * 180.02562 * 18 17 15 20 20 C 1.38711 * 120.05368 * 179.72958 * 19 18 17 21 21 C 1.50699 * 120.02926 * 359.97438 * 20 19 18 22 22 O 1.42903 * 109.47041 * 74.99921 * 21 20 19 23 23 Si 1.86300 * 109.47520 * 195.00329 * 21 20 19 24 24 C 1.38170 * 119.94335 * 179.67779 * 20 19 18 25 25 C 1.38244 * 120.05500 * 0.61209 * 24 20 19 26 26 C 1.38288 * 120.10798 * 359.68107 * 25 24 20 27 27 C 1.38125 * 120.06059 * 0.02562 * 26 25 24 28 28 N 1.33775 * 106.49785 * 359.97438 * 12 11 10 29 29 N 1.28637 * 108.88137 * 0.02562 * 28 12 11 30 30 C 1.53783 * 87.17280 * 334.52443 * 8 7 5 31 31 H 1.08997 * 109.47292 * 180.02562 * 1 2 3 32 32 H 1.08996 * 109.47027 * 299.99927 * 1 2 3 33 33 H 1.09002 * 109.46935 * 60.00003 * 1 2 3 34 34 H 1.09006 * 113.61476 * 25.43192 * 7 5 3 35 35 H 1.08997 * 113.61368 * 254.52841 * 7 5 3 36 36 H 1.08002 * 126.91313 * 0.02562 * 11 10 8 37 37 H 1.08998 * 109.46953 * 215.00023 * 13 12 11 38 38 H 1.08994 * 109.47138 * 335.00219 * 13 12 11 39 39 H 0.96994 * 120.00507 * 0.02562 * 14 13 12 40 40 H 1.08998 * 109.47388 * 300.00253 * 17 15 14 41 41 H 1.09006 * 109.47179 * 60.00627 * 17 15 14 42 42 H 1.09004 * 109.47270 * 315.00869 * 21 20 19 43 43 H 0.96705 * 113.99428 * 60.00457 * 22 21 20 44 44 H 1.48492 * 110.00209 * 179.97438 * 23 21 20 45 45 H 1.48499 * 109.99795 * 301.32163 * 23 21 20 46 46 H 1.07997 * 119.97394 * 180.31638 * 24 20 19 47 47 H 1.07994 * 119.94495 * 179.70664 * 25 24 20 48 48 H 1.08007 * 119.96755 * 180.02562 * 26 25 24 49 49 H 1.08001 * 120.02728 * 180.02562 * 27 26 25 50 50 H 1.09007 * 113.60954 * 140.02182 * 30 8 7 51 51 H 1.08997 * 113.61881 * 270.92267 * 30 8 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1960 0.0000 4 8 1.4034 2.2093 -0.0005 5 6 3.5664 1.2748 -0.0006 6 1 4.0234 0.6364 -0.7566 7 6 4.1078 2.7142 -0.0011 8 6 5.1814 2.2270 0.9862 9 1 5.3978 2.9393 1.7825 10 7 6.3905 1.7178 0.3343 11 6 6.5618 0.4672 -0.1530 12 6 7.8143 0.4302 -0.6647 13 6 8.4840 -0.7472 -1.3254 14 7 8.3135 -0.6542 -2.7775 15 6 8.8336 -1.6045 -3.5793 16 8 9.4424 -2.5369 -3.0987 17 6 8.6577 -1.5092 -5.0730 18 8 9.2928 -2.6255 -5.6996 19 6 9.2273 -2.6916 -7.0554 20 6 9.8269 -3.7452 -7.7294 21 6 10.5525 -4.8180 -6.9588 22 8 9.6010 -5.6785 -6.3294 23 14 11.6122 -5.8116 -8.1253 24 6 9.7532 -3.8136 -9.1074 25 6 9.0934 -2.8264 -9.8153 26 6 8.5000 -1.7717 -9.1461 27 6 8.5656 -1.7019 -7.7681 28 7 8.3409 1.6442 -0.4685 29 7 7.4722 2.3837 0.1258 30 6 4.1928 1.1236 1.3987 31 1 -0.3634 -1.0276 0.0005 32 1 -0.3633 0.5138 0.8900 33 1 -0.3633 0.5138 -0.8900 34 1 3.4175 3.4406 0.4279 35 1 4.5105 3.0288 -0.9639 36 1 5.8433 -0.3390 -0.1376 37 1 9.5468 -0.7436 -1.0834 38 1 8.0324 -1.6714 -0.9651 39 1 7.8269 0.0916 -3.1620 40 1 7.5949 -1.5135 -5.3147 41 1 9.1087 -0.5847 -5.4337 42 1 11.1830 -4.3562 -6.1990 43 1 9.0050 -6.1243 -6.9469 44 1 12.3334 -6.8726 -7.3775 45 1 10.7681 -6.4205 -9.1846 46 1 10.2155 -4.6365 -9.6323 47 1 9.0409 -2.8791 -10.8927 48 1 7.9847 -1.0019 -9.7014 49 1 8.1017 -0.8782 -7.2460 50 1 4.6642 0.1550 1.5652 51 1 3.5257 1.4158 2.2096 There are 74 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 74 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16723000_2989392.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:45 Heat of formation + Delta-G solvation = -14.939686 kcal Electronic energy + Delta-G solvation = -36849.145145 eV Core-core repulsion = 31720.000772 eV Total energy + Delta-G solvation = -5129.144373 eV No. of doubly occupied orbitals = 74 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 403.167 amu Computer time = 1.76 seconds Orbital eigenvalues (eV) -44.55954 -41.93096 -41.58411 -40.57742 -39.80625 -38.54722 -37.58747 -37.52902 -36.34819 -34.12062 -32.84548 -32.58645 -31.25502 -29.90465 -29.55547 -27.68902 -27.33744 -26.82042 -26.65531 -24.37553 -23.58611 -22.64302 -22.57891 -22.21319 -21.66554 -20.73785 -19.50751 -19.13217 -18.62155 -18.13729 -17.98016 -17.80066 -17.60541 -17.49821 -17.38778 -16.93050 -16.87339 -16.40933 -16.21557 -15.83590 -15.76243 -15.53847 -15.51844 -15.18618 -15.01279 -14.83329 -14.57111 -14.27704 -14.16885 -14.01209 -13.85489 -13.70450 -13.65585 -13.44355 -13.32448 -13.03101 -12.96041 -12.72854 -12.51539 -12.25496 -12.10896 -12.02794 -11.88798 -11.86786 -11.86326 -11.66491 -11.53530 -11.23394 -11.06203 -10.51110 -10.40195 -10.28481 -9.95597 -9.19402 -4.93251 0.25650 0.43119 0.44261 1.00072 1.05563 1.17011 1.30903 1.42945 1.55649 1.64978 1.72255 1.95090 2.65999 2.72215 2.75439 3.03626 3.13757 3.26880 3.48079 3.54168 3.60088 3.65939 3.74097 3.91371 3.91682 3.96496 3.99422 4.06936 4.13500 4.14866 4.17396 4.24907 4.28246 4.33834 4.39620 4.42356 4.47336 4.55637 4.56794 4.59674 4.69652 4.70104 4.70332 4.82724 4.87846 4.95630 5.00385 5.18492 5.30738 5.30749 5.39712 5.53469 5.55276 5.77726 6.26150 6.42802 6.55670 6.59538 7.06112 7.35925 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.027 3.973 2 O -0.360 6.360 3 C 0.472 3.528 4 O -0.535 6.535 5 C -0.114 4.114 6 H 0.147 0.853 7 C -0.118 4.118 8 C 0.109 3.891 9 H 0.145 0.855 10 N -0.267 5.267 11 C -0.008 4.008 12 C -0.051 4.051 13 C 0.215 3.785 14 N -0.706 5.706 15 C 0.518 3.482 16 O -0.565 6.565 17 C 0.038 3.962 18 O -0.311 6.311 19 C 0.130 3.870 20 C -0.163 4.163 21 C -0.082 4.082 22 O -0.548 6.548 23 Si 0.780 3.220 24 C -0.088 4.088 25 C -0.154 4.154 26 C -0.075 4.075 27 C -0.212 4.212 28 N -0.286 5.286 29 N -0.105 5.105 30 C -0.107 4.107 31 H 0.127 0.873 32 H 0.063 0.937 33 H 0.059 0.941 34 H 0.122 0.878 35 H 0.085 0.915 36 H 0.233 0.767 37 H 0.070 0.930 38 H 0.103 0.897 39 H 0.416 0.584 40 H 0.123 0.877 41 H 0.120 0.880 42 H 0.097 0.903 43 H 0.381 0.619 44 H -0.308 1.308 45 H -0.264 1.264 46 H 0.146 0.854 47 H 0.150 0.850 48 H 0.152 0.848 49 H 0.153 0.847 50 H 0.118 0.882 51 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.489 2.235 -2.568 8.226 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.066 4.066 2 O -0.276 6.276 3 C 0.316 3.684 4 O -0.425 6.425 5 C -0.133 4.133 6 H 0.165 0.835 7 C -0.156 4.156 8 C 0.008 3.992 9 H 0.163 0.837 10 N -0.059 5.059 11 C -0.160 4.160 12 C -0.190 4.190 13 C 0.090 3.910 14 N -0.361 5.361 15 C 0.304 3.696 16 O -0.443 6.443 17 C -0.040 4.040 18 O -0.223 6.223 19 C 0.085 3.915 20 C -0.164 4.164 21 C -0.189 4.189 22 O -0.355 6.355 23 Si 0.684 3.316 24 C -0.106 4.106 25 C -0.172 4.172 26 C -0.093 4.093 27 C -0.231 4.231 28 N -0.153 5.153 29 N -0.084 5.084 30 C -0.145 4.145 31 H 0.145 0.855 32 H 0.082 0.918 33 H 0.078 0.922 34 H 0.140 0.860 35 H 0.103 0.897 36 H 0.249 0.751 37 H 0.088 0.912 38 H 0.121 0.879 39 H 0.253 0.747 40 H 0.140 0.860 41 H 0.138 0.862 42 H 0.115 0.885 43 H 0.230 0.770 44 H -0.236 1.236 45 H -0.190 1.190 46 H 0.164 0.836 47 H 0.167 0.833 48 H 0.170 0.830 49 H 0.171 0.829 50 H 0.136 0.864 51 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges -6.032 2.561 -1.668 6.762 hybrid contribution -2.191 -0.626 0.238 2.291 sum -8.222 1.935 -1.430 8.567 Atomic orbital electron populations 1.23529 0.74985 1.05606 1.02492 1.86511 1.24715 1.32980 1.83394 1.23849 0.92280 0.81104 0.71195 1.90701 1.67825 1.37476 1.46462 1.22911 0.86656 1.01055 1.02641 0.83510 1.23352 0.95763 0.95694 1.00784 1.22722 0.79852 0.99772 0.96884 0.83709 1.47327 1.12209 1.08825 1.37546 1.23960 0.99819 0.90619 1.01622 1.21869 0.94255 0.95218 1.07680 1.19300 1.00251 0.93127 0.78328 1.45656 1.57207 1.26862 1.06362 1.20420 0.78400 0.81851 0.88954 1.90792 1.41883 1.34431 1.77182 1.22670 1.01254 0.90706 0.89414 1.86187 1.73052 1.45465 1.17637 1.19057 0.95822 0.94973 0.81694 1.19707 1.04958 0.97592 0.94156 1.25193 0.95919 0.93997 1.03836 1.86652 1.49211 1.61934 1.37720 0.94030 0.81138 0.80111 0.76342 1.21193 0.98006 0.99721 0.91656 1.21393 0.99623 0.94725 1.01489 1.21388 0.96576 0.97991 0.93357 1.21583 1.04962 1.00436 0.96104 1.75139 1.23391 1.03164 1.13605 1.78401 0.91203 1.21330 1.17450 1.23441 0.95589 1.00165 0.95336 0.85473 0.91828 0.92187 0.85991 0.89654 0.75095 0.91171 0.87897 0.74683 0.85977 0.86207 0.88505 0.77024 1.23620 1.19035 0.83649 0.83268 0.83006 0.82937 0.86379 0.85204 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.14 10.56 113.37 1.20 1.05 16 2 O -0.36 1.14 10.57 -51.41 -0.54 0.59 16 3 C 0.47 -1.34 7.49 71.24 0.53 -0.80 16 4 O -0.54 -2.25 15.65 21.99 0.34 -1.90 16 5 C -0.11 1.14 3.83 -10.92 -0.04 1.10 16 6 H 0.15 -2.01 6.87 -2.39 -0.02 -2.02 16 7 C -0.12 0.99 7.20 31.12 0.22 1.21 16 8 C 0.11 -1.04 5.10 45.52 0.23 -0.81 16 9 H 0.15 -1.55 8.14 -2.38 -0.02 -1.57 16 10 N -0.27 1.09 3.52 -324.66 -1.14 -0.05 16 11 C -0.01 0.05 9.61 83.49 0.80 0.86 16 12 C -0.05 0.05 6.62 41.60 0.28 0.32 16 13 C 0.21 -0.15 6.23 85.64 0.53 0.38 16 14 N -0.71 1.69 5.55 -466.79 -2.59 -0.90 16 15 C 0.52 2.09 7.91 87.66 0.69 2.78 16 16 O -0.57 -8.73 16.50 15.99 0.26 -8.47 16 17 C 0.04 -0.04 5.22 71.23 0.37 0.33 16 18 O -0.31 -2.45 9.00 -73.39 -0.66 -3.11 16 19 C 0.13 0.60 6.66 22.51 0.15 0.75 16 20 C -0.16 -0.71 5.27 -19.77 -0.10 -0.81 16 21 C -0.08 -0.54 2.38 71.24 0.17 -0.37 16 22 O -0.55 -5.55 12.88 -148.98 -1.92 -7.47 16 23 Si 0.78 1.21 30.26 68.60 2.08 3.29 16 24 C -0.09 0.01 8.66 22.25 0.19 0.20 16 25 C -0.15 0.40 10.04 22.28 0.22 0.62 16 26 C -0.08 0.24 10.04 22.25 0.22 0.47 16 27 C -0.21 0.29 9.04 22.37 0.20 0.49 16 28 N -0.29 -1.77 12.41 -48.59 -0.60 -2.37 16 29 N -0.11 -0.47 13.16 37.02 0.49 0.02 16 30 C -0.11 1.44 6.90 31.21 0.22 1.65 16 31 H 0.13 -1.30 8.14 -2.39 -0.02 -1.32 16 32 H 0.06 -0.31 8.13 -2.39 -0.02 -0.33 16 33 H 0.06 -0.25 8.13 -2.39 -0.02 -0.27 16 34 H 0.12 -0.86 7.44 -2.38 -0.02 -0.87 16 35 H 0.08 -0.56 8.14 -2.39 -0.02 -0.58 16 36 H 0.23 -3.63 6.70 -2.91 -0.02 -3.65 16 37 H 0.07 0.28 8.14 -2.39 -0.02 0.26 16 38 H 0.10 -0.31 8.14 -2.39 -0.02 -0.33 16 39 H 0.42 -3.23 8.46 -92.71 -0.78 -4.02 16 40 H 0.12 -0.92 7.66 -2.39 -0.02 -0.94 16 41 H 0.12 -0.80 7.66 -2.38 -0.02 -0.82 16 42 H 0.10 0.96 7.83 -2.38 -0.02 0.94 16 43 H 0.38 1.00 8.70 -74.05 -0.64 0.35 16 44 H -0.31 -3.02 7.11 99.48 0.71 -2.31 16 45 H -0.26 -0.54 6.67 99.48 0.66 0.12 16 46 H 0.15 -0.47 4.87 -2.91 -0.01 -0.49 16 47 H 0.15 -1.06 8.06 -2.91 -0.02 -1.09 16 48 H 0.15 -1.27 8.06 -2.91 -0.02 -1.29 16 49 H 0.15 -1.10 6.30 -2.91 -0.02 -1.12 16 50 H 0.12 -1.93 7.06 -2.38 -0.02 -1.95 16 51 H 0.13 -1.88 8.10 -2.39 -0.02 -1.90 16 Total: 0.00 -37.55 432.76 1.39 -36.17 By element: Atomic # 1 Polarization: -24.79 SS G_CDS: -0.42 Total: -25.21 kcal Atomic # 6 Polarization: 3.33 SS G_CDS: 6.09 Total: 9.42 kcal Atomic # 7 Polarization: 0.54 SS G_CDS: -3.85 Total: -3.30 kcal Atomic # 8 Polarization: -17.85 SS G_CDS: -2.51 Total: -20.36 kcal Atomic # 14 Polarization: 1.21 SS G_CDS: 2.08 Total: 3.29 kcal Total: -37.55 1.39 -36.17 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16723000_2989392.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.226 kcal (2) G-P(sol) polarization free energy of solvation -37.552 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -16.326 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.386 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.165 kcal (6) G-S(sol) free energy of system = (1) + (5) -14.940 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.76 seconds