Wall clock time and date at job start Tue Mar 9 2021 14:14:18 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.45202 * 1 3 3 C 1.34223 * 117.00295 * 2 1 4 4 O 1.20822 * 120.00264 * 359.97438 * 3 2 1 5 5 C 1.50697 * 120.00099 * 180.02562 * 3 2 1 6 6 H 1.09000 * 109.47238 * 299.99999 * 5 3 2 7 7 C 1.53002 * 109.47276 * 60.00101 * 5 3 2 8 8 C 1.53001 * 109.47473 * 179.97438 * 7 5 3 9 9 C 1.52992 * 109.47232 * 300.00070 * 8 7 5 10 10 F 1.39901 * 109.47221 * 299.99977 * 9 8 7 11 11 C 1.52997 * 109.47393 * 179.97438 * 9 8 7 12 12 N 1.46498 * 109.46916 * 64.99935 * 11 9 8 13 13 C 1.34782 * 120.00182 * 179.97438 * 12 11 9 14 14 O 1.21657 * 119.99470 * 0.02562 * 13 12 11 15 15 C 1.47050 * 120.00153 * 180.02562 * 13 12 11 16 16 C 1.35870 * 125.42379 * 179.97438 * 15 13 12 17 17 C 1.41602 * 107.72553 * 179.97438 * 16 15 13 18 18 C 1.40066 * 133.38029 * 180.02562 * 17 16 15 19 19 C 1.36475 * 119.82274 * 179.75711 * 18 17 16 20 20 C 1.38893 * 120.61915 * 0.47985 * 19 18 17 21 21 C 1.50707 * 119.67399 * 179.78020 * 20 19 18 22 22 O 1.42903 * 109.46442 * 244.72438 * 21 20 19 23 23 Si 1.86293 * 109.47256 * 4.72005 * 21 20 19 24 24 C 1.37709 * 120.64943 * 359.49596 * 20 19 18 25 25 C 1.39188 * 119.80697 * 0.26416 * 24 20 19 26 26 N 1.37489 * 133.18491 * 180.02562 * 25 24 20 27 27 C 1.53003 * 109.47320 * 59.99650 * 9 8 7 28 28 C 1.53001 * 109.47254 * 300.00336 * 27 9 8 29 29 H 1.08994 * 109.46545 * 299.99971 * 1 2 3 30 30 H 1.09000 * 109.47019 * 59.99840 * 1 2 3 31 31 H 1.08999 * 109.47027 * 180.02562 * 1 2 3 32 32 H 1.09003 * 109.46780 * 300.00099 * 7 5 3 33 33 H 1.09000 * 109.47071 * 59.99795 * 7 5 3 34 34 H 1.08993 * 109.47495 * 179.97438 * 8 7 5 35 35 H 1.09000 * 109.47047 * 59.99894 * 8 7 5 36 36 H 1.08998 * 109.47183 * 304.99754 * 11 9 8 37 37 H 1.09001 * 109.47171 * 184.99822 * 11 9 8 38 38 H 0.97001 * 120.00268 * 0.02562 * 12 11 9 39 39 H 1.07990 * 126.13986 * 359.97378 * 16 15 13 40 40 H 1.07995 * 120.08498 * 359.97438 * 18 17 16 41 41 H 1.08004 * 119.68798 * 180.26164 * 19 18 17 42 42 H 1.08999 * 109.47345 * 124.72508 * 21 20 19 43 43 H 0.96700 * 114.00311 * 60.00230 * 22 21 20 44 44 H 1.48501 * 109.99918 * 58.68485 * 23 21 20 45 45 H 1.48506 * 109.99973 * 180.02562 * 23 21 20 46 46 H 1.08000 * 120.09679 * 180.27753 * 24 20 19 47 47 H 0.96999 * 125.60064 * 359.96413 * 26 25 24 48 48 H 1.09000 * 109.46918 * 60.00200 * 27 9 8 49 49 H 1.09003 * 109.47151 * 180.02562 * 27 9 8 50 50 H 1.08993 * 109.47495 * 179.97438 * 28 27 9 51 51 H 1.09000 * 109.47047 * 299.99785 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4520 0.0000 0.0000 3 6 2.0614 1.1959 0.0000 4 8 1.4035 2.2093 -0.0005 5 6 3.5663 1.2747 -0.0006 6 1 3.9564 0.7804 0.8891 7 6 4.1129 0.5814 -1.2502 8 6 5.6408 0.6620 -1.2512 9 6 6.0742 2.1292 -1.2513 10 9 5.5731 2.7634 -2.3932 11 6 7.6020 2.2098 -1.2516 12 7 8.1201 1.6525 -2.5035 13 6 9.4488 1.6188 -2.7273 14 8 10.2178 2.0508 -1.8894 15 6 9.9688 1.0600 -3.9841 16 6 11.2815 0.9721 -4.3233 17 6 11.3565 0.3766 -5.6059 18 6 12.4228 0.0394 -6.4491 19 6 12.1742 -0.5442 -7.6575 20 6 10.8712 -0.7989 -8.0654 21 6 10.6208 -1.4397 -9.4063 22 8 9.9213 -0.5221 -10.2494 23 14 12.2485 -1.8891 -10.1933 24 6 9.8060 -0.4770 -7.2541 25 6 10.0341 0.1145 -6.0149 26 7 9.2005 0.5400 -5.0077 27 6 5.5276 2.8226 -0.0017 28 6 3.9997 2.7421 -0.0008 29 1 -0.3632 0.5138 0.8900 30 1 -0.3633 0.5139 -0.8900 31 1 -0.3633 -1.0277 0.0005 32 1 3.8038 -0.4639 -1.2503 33 1 3.7228 1.0757 -2.1399 34 1 6.0302 0.1677 -2.1411 35 1 6.0312 0.1679 -0.3614 36 1 7.9961 1.6404 -0.4099 37 1 7.9109 3.2513 -1.1622 38 1 7.5069 1.3085 -3.1717 39 1 12.1177 1.2979 -3.7226 40 1 13.4392 0.2375 -6.1423 41 1 12.9983 -0.8072 -8.3042 42 1 10.0211 -2.3399 -9.2725 43 1 10.3973 0.3038 -10.4122 44 1 12.9998 -2.8180 -9.3114 45 1 12.0153 -2.5214 -11.5167 46 1 8.7966 -0.6831 -7.5782 47 1 8.2321 0.4846 -5.0149 48 1 5.9181 2.3286 0.8880 49 1 5.8360 3.8681 -0.0021 50 1 3.6104 3.2356 0.8896 51 1 3.6093 3.2361 -0.8905 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16738318_13158378.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:14:18 Heat of formation + Delta-G solvation = -146.221120 kcal Electronic energy + Delta-G solvation = -35972.733402 eV Core-core repulsion = 30946.202418 eV Total energy + Delta-G solvation = -5026.530984 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 391.167 amu Computer time = 1.42 seconds Orbital eigenvalues (eV) -49.00106 -42.71540 -41.72397 -40.62482 -39.16233 -38.89632 -37.48505 -36.91332 -36.16313 -33.35066 -32.93809 -32.24146 -31.14200 -30.43790 -29.19376 -27.89581 -26.52106 -24.61505 -24.30690 -23.67572 -22.97632 -22.01325 -21.82592 -21.28804 -20.88817 -19.77376 -18.69482 -18.47522 -17.96181 -17.84681 -17.70908 -17.38899 -17.07282 -16.96211 -16.54283 -16.44336 -16.21538 -16.00124 -15.57728 -15.36478 -15.30656 -15.15764 -14.91758 -14.85674 -14.78156 -14.57145 -14.46660 -14.17609 -14.07100 -14.02204 -13.73619 -13.50810 -13.28804 -13.18026 -13.15958 -12.93640 -12.59400 -12.56005 -12.43739 -12.08142 -11.99964 -11.90539 -11.80442 -11.68022 -11.46204 -11.35639 -11.28272 -10.95466 -10.47422 -10.43271 -9.34960 -8.85401 -5.01635 -0.37188 0.49893 0.96711 1.12280 1.28142 1.61140 1.65209 1.68930 1.81611 1.99370 2.21062 2.75414 2.94408 3.03417 3.22157 3.26500 3.40675 3.47110 3.50884 3.61875 3.66986 3.68603 3.74390 3.89141 3.98255 4.01152 4.08896 4.11124 4.18904 4.21327 4.22074 4.26223 4.31960 4.39880 4.42064 4.44039 4.48329 4.55538 4.58734 4.61198 4.68118 4.76611 4.83672 4.86690 4.92713 4.93679 4.99340 5.11320 5.29625 5.33979 5.37667 5.49834 5.58401 5.92902 6.10275 6.27075 6.55126 6.67028 6.88974 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.034 3.966 2 O -0.359 6.359 3 C 0.464 3.536 4 O -0.502 6.502 5 C -0.081 4.081 6 H 0.113 0.887 7 C -0.113 4.113 8 C -0.138 4.138 9 C 0.109 3.891 10 F -0.199 7.199 11 C 0.101 3.899 12 N -0.727 5.727 13 C 0.587 3.413 14 O -0.515 6.515 15 C 0.012 3.988 16 C -0.097 4.097 17 C -0.117 4.117 18 C -0.050 4.050 19 C -0.145 4.145 20 C -0.087 4.087 21 C -0.068 4.068 22 O -0.540 6.540 23 Si 0.691 3.309 24 C -0.104 4.104 25 C 0.116 3.884 26 N -0.578 5.578 27 C -0.136 4.136 28 C -0.106 4.106 29 H 0.064 0.936 30 H 0.064 0.936 31 H 0.103 0.897 32 H 0.087 0.913 33 H 0.077 0.923 34 H 0.079 0.921 35 H 0.092 0.908 36 H 0.093 0.907 37 H 0.087 0.913 38 H 0.399 0.601 39 H 0.159 0.841 40 H 0.133 0.867 41 H 0.130 0.870 42 H 0.113 0.887 43 H 0.380 0.620 44 H -0.257 1.257 45 H -0.256 1.256 46 H 0.126 0.874 47 H 0.417 0.583 48 H 0.091 0.909 49 H 0.089 0.911 50 H 0.083 0.917 51 H 0.081 0.919 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.001 -1.956 0.367 1.990 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.060 4.060 2 O -0.275 6.275 3 C 0.306 3.694 4 O -0.389 6.389 5 C -0.100 4.100 6 H 0.131 0.869 7 C -0.151 4.151 8 C -0.175 4.175 9 C 0.091 3.909 10 F -0.179 7.179 11 C -0.023 4.023 12 N -0.380 5.380 13 C 0.374 3.626 14 O -0.390 6.390 15 C -0.097 4.097 16 C -0.124 4.124 17 C -0.122 4.122 18 C -0.069 4.069 19 C -0.163 4.163 20 C -0.090 4.090 21 C -0.179 4.179 22 O -0.346 6.346 23 Si 0.592 3.408 24 C -0.124 4.124 25 C 0.006 3.994 26 N -0.183 5.183 27 C -0.174 4.174 28 C -0.144 4.144 29 H 0.083 0.917 30 H 0.083 0.917 31 H 0.122 0.878 32 H 0.105 0.895 33 H 0.095 0.905 34 H 0.097 0.903 35 H 0.111 0.889 36 H 0.111 0.889 37 H 0.105 0.895 38 H 0.233 0.767 39 H 0.177 0.823 40 H 0.151 0.849 41 H 0.147 0.853 42 H 0.131 0.869 43 H 0.227 0.773 44 H -0.182 1.182 45 H -0.181 1.181 46 H 0.144 0.856 47 H 0.255 0.745 48 H 0.109 0.891 49 H 0.108 0.892 50 H 0.102 0.898 51 H 0.100 0.900 Dipole moment (debyes) X Y Z Total from point charges 0.209 -2.423 0.737 2.541 hybrid contribution -1.726 -0.265 0.056 1.748 sum -1.518 -2.688 0.793 3.187 Atomic orbital electron populations 1.23325 0.75846 1.04024 1.02769 1.86494 1.23798 1.33316 1.83921 1.23705 0.91906 0.81470 0.72319 1.90700 1.67135 1.36362 1.44693 1.21149 0.87319 0.99491 1.02016 0.86875 1.21521 0.94765 1.02004 0.96775 1.22156 0.96422 0.94316 1.04656 1.21250 0.92183 0.93305 0.84201 1.92888 1.88838 1.83773 1.52436 1.22015 0.91564 1.01391 0.87301 1.45732 1.06929 1.64290 1.21000 1.17155 0.81938 0.78533 0.84972 1.90896 1.56743 1.46538 1.44783 1.20018 0.91681 1.07384 0.90580 1.20980 0.94945 1.01292 0.95193 1.18225 0.92637 1.05325 0.95979 1.20385 0.98089 0.95829 0.92558 1.20467 0.95478 1.02926 0.97446 1.20038 0.92855 0.99661 0.96398 1.25082 1.08234 0.95107 0.89489 1.86506 1.48233 1.31484 1.68368 0.94588 0.78394 0.87833 0.79943 1.19871 0.99664 1.01879 0.91032 1.18309 0.89827 1.00380 0.90852 1.41896 1.08399 1.53383 1.14655 1.22087 0.96089 1.02614 0.96590 1.21430 0.94406 0.93543 1.04972 0.91710 0.91730 0.87814 0.89474 0.90464 0.90250 0.88936 0.88864 0.89476 0.76667 0.82318 0.84944 0.85303 0.86945 0.77259 1.18153 1.18095 0.85569 0.74499 0.89077 0.89244 0.89810 0.89989 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.03 10.56 101.05 1.07 1.03 16 2 O -0.36 -0.22 10.47 -39.24 -0.41 -0.63 16 3 C 0.46 0.54 7.25 36.00 0.26 0.80 16 4 O -0.50 -2.17 15.73 -18.75 -0.29 -2.46 16 5 C -0.08 0.16 2.63 -91.77 -0.24 -0.08 16 6 H 0.11 -0.43 8.14 -51.93 -0.42 -0.85 16 7 C -0.11 0.33 5.01 -26.73 -0.13 0.20 16 8 C -0.14 0.56 4.87 -26.73 -0.13 0.43 16 9 C 0.11 -0.32 0.84 -90.62 -0.08 -0.39 16 10 F -0.20 0.09 15.42 2.25 0.03 0.12 16 11 C 0.10 -0.21 4.84 -4.04 -0.02 -0.23 16 12 N -0.73 1.10 5.17 -61.50 -0.32 0.78 16 13 C 0.59 0.85 7.80 -12.69 -0.10 0.75 16 14 O -0.51 -2.51 16.84 5.23 0.09 -2.42 16 15 C 0.01 0.01 6.96 -82.30 -0.57 -0.56 16 16 C -0.10 -0.15 10.53 -39.15 -0.41 -0.56 16 17 C -0.12 -0.15 6.16 -106.93 -0.66 -0.81 16 18 C -0.05 0.00 10.06 -39.53 -0.40 -0.39 16 19 C -0.14 0.10 8.59 -39.97 -0.34 -0.24 16 20 C -0.09 0.02 5.36 -104.57 -0.56 -0.54 16 21 C -0.07 0.04 2.79 36.01 0.10 0.15 16 22 O -0.54 0.09 12.83 -35.23 -0.45 -0.36 16 23 Si 0.69 -0.94 29.76 -169.99 -5.06 -6.00 16 24 C -0.10 -0.03 9.69 -39.42 -0.38 -0.41 16 25 C 0.12 0.09 7.25 -83.97 -0.61 -0.52 16 26 N -0.58 0.46 6.07 -7.36 -0.04 0.42 16 27 C -0.14 0.45 5.00 -26.73 -0.13 0.32 16 28 C -0.11 0.17 4.37 -26.73 -0.12 0.05 16 29 H 0.06 -0.06 8.13 -51.93 -0.42 -0.48 16 30 H 0.06 -0.05 8.13 -51.93 -0.42 -0.47 16 31 H 0.10 -0.35 8.14 -51.93 -0.42 -0.77 16 32 H 0.09 -0.29 8.11 -51.93 -0.42 -0.71 16 33 H 0.08 -0.13 7.80 -51.93 -0.41 -0.53 16 34 H 0.08 -0.37 7.18 -51.93 -0.37 -0.74 16 35 H 0.09 -0.48 8.14 -51.93 -0.42 -0.90 16 36 H 0.09 -0.24 8.14 -51.93 -0.42 -0.67 16 37 H 0.09 -0.10 8.14 -51.93 -0.42 -0.52 16 38 H 0.40 -1.37 6.51 -40.82 -0.27 -1.63 16 39 H 0.16 0.13 8.06 -52.49 -0.42 -0.29 16 40 H 0.13 -0.28 8.06 -52.49 -0.42 -0.70 16 41 H 0.13 -0.35 4.85 -52.48 -0.25 -0.61 16 42 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 43 H 0.38 -1.48 8.70 45.56 0.40 -1.08 16 44 H -0.26 -0.26 7.11 56.52 0.40 0.14 16 45 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 46 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 47 H 0.42 -1.51 8.12 -40.82 -0.33 -1.84 16 48 H 0.09 -0.45 8.14 -51.93 -0.42 -0.87 16 49 H 0.09 -0.29 8.14 -51.93 -0.42 -0.71 16 50 H 0.08 -0.10 8.10 -51.93 -0.42 -0.52 16 51 H 0.08 0.02 7.76 -51.93 -0.40 -0.38 16 LS Contribution 419.60 15.07 6.32 6.32 Total: 0.00 -10.71 419.60 -10.75 -21.47 By element: Atomic # 1 Polarization: -9.03 SS G_CDS: -7.16 Total: -16.20 kcal Atomic # 6 Polarization: 2.43 SS G_CDS: -3.46 Total: -1.03 kcal Atomic # 7 Polarization: 1.56 SS G_CDS: -0.36 Total: 1.20 kcal Atomic # 8 Polarization: -4.82 SS G_CDS: -1.07 Total: -5.88 kcal Atomic # 9 Polarization: 0.09 SS G_CDS: 0.03 Total: 0.12 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.06 Total: -6.00 kcal Total LS contribution 6.32 Total: 6.32 kcal Total: -10.71 -10.75 -21.47 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16738318_13158378.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -124.754 kcal (2) G-P(sol) polarization free energy of solvation -10.713 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -135.467 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.754 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.468 kcal (6) G-S(sol) free energy of system = (1) + (5) -146.221 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.42 seconds