Wall clock time and date at job start Tue Mar 9 2021 14:19:58 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42900 * 1 3 3 C 1.35647 * 117.00265 * 2 1 4 4 C 1.40138 * 120.15247 * 179.97438 * 3 2 1 5 5 C 1.47535 * 120.18714 * 0.02562 * 4 3 2 6 6 O 1.21582 * 120.00388 * 359.71678 * 5 4 3 7 7 N 1.34782 * 119.99439 * 179.72641 * 5 4 3 8 8 C 1.46500 * 119.99474 * 179.97438 * 7 5 4 9 9 H 1.08996 * 109.47738 * 34.99759 * 8 7 5 10 10 C 1.53002 * 109.47089 * 154.99416 * 8 7 5 11 11 C 1.52997 * 109.47415 * 179.97438 * 10 8 7 12 12 C 1.53006 * 109.47164 * 300.00027 * 11 10 8 13 13 C 1.52997 * 109.47164 * 179.97438 * 12 11 10 14 14 F 1.39903 * 109.46814 * 300.00282 * 12 11 10 15 15 C 1.52999 * 109.46626 * 59.99702 * 12 11 10 16 16 C 1.52996 * 109.47249 * 274.99290 * 8 7 5 17 17 C 1.39711 * 119.61774 * 179.72640 * 4 3 2 18 18 C 1.37787 * 119.90829 * 0.24702 * 17 4 3 19 19 C 1.50694 * 119.85127 * 179.97438 * 18 17 4 20 20 O 1.42900 * 109.47490 * 300.00643 * 19 18 17 21 21 Si 1.86300 * 109.47365 * 180.02562 * 19 18 17 22 22 C 1.38553 * 120.29828 * 359.97438 * 18 17 4 23 23 C 1.38057 * 120.39327 * 0.02562 * 22 18 17 24 24 H 1.08997 * 109.47402 * 180.02562 * 1 2 3 25 25 H 1.08997 * 109.47137 * 300.00131 * 1 2 3 26 26 H 1.08998 * 109.47093 * 60.00033 * 1 2 3 27 27 H 0.96992 * 120.00293 * 359.97438 * 7 5 4 28 28 H 1.09000 * 109.46986 * 59.99786 * 10 8 7 29 29 H 1.09001 * 109.47601 * 300.00509 * 10 8 7 30 30 H 1.09001 * 109.46922 * 180.02562 * 11 10 8 31 31 H 1.09000 * 109.47140 * 59.99976 * 11 10 8 32 32 H 1.09001 * 109.47375 * 59.99966 * 13 12 11 33 33 H 1.09002 * 109.46777 * 180.02562 * 13 12 11 34 34 H 1.09000 * 109.47140 * 299.99948 * 13 12 11 35 35 H 1.09000 * 109.47160 * 60.00369 * 15 12 11 36 36 H 1.09002 * 109.46719 * 180.02562 * 15 12 11 37 37 H 1.09000 * 109.47054 * 300.00354 * 16 8 7 38 38 H 1.09001 * 109.46997 * 60.00087 * 16 8 7 39 39 H 1.07999 * 120.04474 * 180.23704 * 17 4 3 40 40 H 1.09009 * 109.46941 * 60.00442 * 19 18 17 41 41 H 0.96703 * 113.99876 * 300.00282 * 20 19 18 42 42 H 1.48499 * 109.99777 * 58.68663 * 21 19 18 43 43 H 1.48496 * 109.99875 * 180.02562 * 21 19 18 44 44 H 1.08001 * 119.80423 * 180.02562 * 22 18 17 45 45 H 1.08000 * 119.95859 * 179.97438 * 23 22 18 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0449 1.2086 0.0000 4 6 3.4441 1.2856 0.0005 5 6 4.2549 0.0530 0.0005 6 8 3.7094 -1.0335 0.0053 7 7 5.6005 0.1316 -0.0045 8 6 6.4056 -1.0923 -0.0039 9 1 5.8999 -1.8602 -0.5893 10 6 7.7758 -0.8017 -0.6195 11 6 8.6170 -2.0797 -0.6183 12 6 8.7975 -2.5702 0.8197 13 6 9.6381 -3.8485 0.8208 14 9 9.4463 -1.5841 1.5707 15 6 7.4272 -2.8608 1.4351 16 6 6.5861 -1.5834 1.4338 17 6 4.0668 2.5363 -0.0053 18 6 3.3039 3.6836 -0.0063 19 6 3.9768 5.0319 -0.0120 20 8 4.7957 5.1605 1.1520 21 14 2.6827 6.3720 -0.0113 22 6 1.9207 3.6032 -0.0022 23 6 1.2925 2.3739 0.0036 24 1 -0.3634 -1.0276 0.0005 25 1 -0.3633 0.5138 0.8899 26 1 -0.3633 0.5138 -0.8900 27 1 6.0357 0.9984 -0.0085 28 1 8.2816 -0.0338 -0.0341 29 1 7.6473 -0.4518 -1.6437 30 1 9.5933 -1.8725 -1.0564 31 1 8.1114 -2.8479 -1.2034 32 1 10.6143 -3.6419 0.3822 33 1 9.7663 -4.1982 1.8452 34 1 9.1321 -4.6166 0.2358 35 1 6.9217 -3.6290 0.8500 36 1 7.5558 -3.2098 2.4597 37 1 7.0919 -0.8155 2.0192 38 1 5.6099 -1.7904 1.8723 39 1 5.1447 2.6036 -0.0088 40 1 4.5963 5.1250 -0.9041 41 1 4.3097 5.0877 1.9848 42 1 1.8121 6.2366 1.1840 43 1 3.3336 7.7067 -0.0175 44 1 1.3304 4.5077 -0.0035 45 1 0.2138 2.3195 0.0072 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16738386_12496546.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:19:58 Heat of formation + Delta-G solvation = -132.224433 kcal Electronic energy + Delta-G solvation = -28302.330412 eV Core-core repulsion = 24200.730513 eV Total energy + Delta-G solvation = -4101.599899 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 324.157 amu Computer time = 0.95 seconds Orbital eigenvalues (eV) -48.56813 -41.75640 -40.36215 -39.24499 -38.54830 -37.25295 -35.30758 -33.10071 -32.01718 -31.94856 -31.53881 -28.63981 -27.25536 -26.23126 -25.00082 -24.02747 -22.96485 -22.07480 -21.32687 -20.75556 -19.49432 -18.47141 -18.10661 -17.54309 -16.93115 -16.86873 -16.69944 -16.48772 -16.24088 -16.06897 -15.98816 -15.86610 -15.60536 -14.85478 -14.64954 -14.57865 -14.52798 -14.38649 -13.83182 -13.59443 -13.55588 -13.44155 -13.27194 -13.16430 -13.14429 -12.95016 -12.63041 -12.44896 -12.26727 -12.14632 -12.10809 -11.76596 -11.70332 -11.43612 -11.10580 -10.86095 -10.52212 -10.22317 -9.93648 -9.28694 -5.03529 -0.24873 0.18660 1.20954 1.52165 1.88398 1.90664 2.15567 2.21741 2.73670 3.27808 3.39210 3.47385 3.53112 3.57678 3.64400 3.65096 3.68782 3.86397 3.97399 4.02219 4.08209 4.19057 4.19280 4.23844 4.34440 4.35851 4.37458 4.50406 4.52194 4.56354 4.63629 4.65254 4.67192 4.74256 4.87800 4.89784 5.00471 5.04908 5.05075 5.09270 5.17663 5.22740 5.22959 5.39978 5.49062 5.58182 6.28396 6.33068 6.59636 7.37553 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.019 3.981 2 O -0.279 6.279 3 C 0.193 3.807 4 C -0.175 4.175 5 C 0.562 3.438 6 O -0.516 6.516 7 N -0.727 5.727 8 C 0.148 3.852 9 H 0.091 0.909 10 C -0.130 4.130 11 C -0.134 4.134 12 C 0.115 3.885 13 C -0.174 4.174 14 F -0.208 7.208 15 C -0.135 4.135 16 C -0.132 4.132 17 C -0.020 4.020 18 C -0.167 4.167 19 C -0.069 4.069 20 O -0.530 6.530 21 Si 0.681 3.319 22 C -0.047 4.047 23 C -0.214 4.214 24 H 0.105 0.895 25 H 0.058 0.942 26 H 0.059 0.941 27 H 0.398 0.602 28 H 0.075 0.925 29 H 0.076 0.924 30 H 0.081 0.919 31 H 0.085 0.915 32 H 0.068 0.932 33 H 0.068 0.932 34 H 0.076 0.924 35 H 0.084 0.916 36 H 0.078 0.922 37 H 0.070 0.930 38 H 0.074 0.926 39 H 0.136 0.864 40 H 0.120 0.880 41 H 0.377 0.623 42 H -0.260 1.260 43 H -0.256 1.256 44 H 0.134 0.866 45 H 0.141 0.859 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.170 1.247 -2.570 3.587 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.076 4.076 2 O -0.189 6.189 3 C 0.144 3.856 4 C -0.179 4.179 5 C 0.350 3.650 6 O -0.391 6.391 7 N -0.379 5.379 8 C 0.044 3.956 9 H 0.109 0.891 10 C -0.167 4.167 11 C -0.172 4.172 12 C 0.097 3.903 13 C -0.232 4.232 14 F -0.188 7.188 15 C -0.174 4.174 16 C -0.170 4.170 17 C -0.038 4.038 18 C -0.168 4.168 19 C -0.179 4.179 20 O -0.336 6.336 21 Si 0.582 3.418 22 C -0.065 4.065 23 C -0.233 4.233 24 H 0.123 0.877 25 H 0.076 0.924 26 H 0.078 0.922 27 H 0.234 0.766 28 H 0.094 0.906 29 H 0.095 0.905 30 H 0.099 0.901 31 H 0.103 0.897 32 H 0.087 0.913 33 H 0.088 0.912 34 H 0.095 0.905 35 H 0.102 0.898 36 H 0.096 0.904 37 H 0.089 0.911 38 H 0.093 0.907 39 H 0.153 0.847 40 H 0.137 0.863 41 H 0.224 0.776 42 H -0.184 1.184 43 H -0.181 1.181 44 H 0.151 0.849 45 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -2.350 1.018 -2.579 3.635 hybrid contribution 0.344 0.320 1.190 1.279 sum -2.006 1.338 -1.389 2.783 Atomic orbital electron populations 1.23234 0.78203 1.04748 1.01451 1.86380 1.21182 1.25203 1.86176 1.19095 0.90943 0.85055 0.90509 1.19353 0.90897 0.93937 1.13673 1.17942 0.81860 0.88653 0.76563 1.90837 1.71498 1.28554 1.48252 1.45959 1.05861 1.09700 1.76411 1.20974 0.90831 0.87158 0.96667 0.89092 1.21797 0.94455 0.98563 1.01935 1.22069 1.01525 0.98196 0.95437 1.20958 0.92239 0.86487 0.90596 1.22374 1.00602 0.96488 1.03724 1.92846 1.83150 1.64488 1.78349 1.22080 0.94036 0.98761 1.02485 1.21900 1.00751 0.97452 0.96922 1.20978 0.99925 0.89846 0.93096 1.20070 0.93555 0.95918 1.07236 1.24942 1.02474 0.99162 0.91293 1.86601 1.36807 1.94437 1.15789 0.95098 0.79633 0.77606 0.89422 1.20991 0.93730 0.97346 0.94406 1.21232 1.00739 0.91553 1.09773 0.87677 0.92377 0.92228 0.76645 0.90623 0.90529 0.90072 0.89678 0.91255 0.91244 0.90535 0.89779 0.90353 0.91106 0.90733 0.84675 0.86260 0.77562 1.18441 1.18063 0.84852 0.84140 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.02 9.81 101.05 0.99 0.97 16 2 O -0.28 -0.98 8.57 -40.52 -0.35 -1.32 16 3 C 0.19 0.45 6.70 -38.69 -0.26 0.19 16 4 C -0.17 -0.40 5.89 -104.84 -0.62 -1.02 16 5 C 0.56 2.11 7.73 -12.47 -0.10 2.01 16 6 O -0.52 -3.77 14.82 -16.58 -0.25 -4.02 16 7 N -0.73 -0.66 5.03 -54.85 -0.28 -0.94 16 8 C 0.15 0.11 2.45 -67.93 -0.17 -0.05 16 9 H 0.09 0.20 7.58 -51.93 -0.39 -0.20 16 10 C -0.13 0.11 5.27 -26.73 -0.14 -0.04 16 11 C -0.13 0.14 5.00 -26.73 -0.13 0.01 16 12 C 0.12 0.01 1.23 -90.62 -0.11 -0.10 16 13 C -0.17 0.17 8.93 37.16 0.33 0.51 16 14 F -0.21 -0.57 15.77 2.25 0.04 -0.53 16 15 C -0.14 -0.02 5.00 -26.76 -0.13 -0.15 16 16 C -0.13 -0.16 5.37 -26.76 -0.14 -0.31 16 17 C -0.02 0.00 9.09 -39.20 -0.36 -0.36 16 18 C -0.17 0.13 5.39 -104.67 -0.56 -0.44 16 19 C -0.07 0.09 2.81 36.00 0.10 0.20 16 20 O -0.53 -0.04 12.76 -35.23 -0.45 -0.49 16 21 Si 0.68 -1.27 29.77 -169.99 -5.06 -6.33 16 22 C -0.05 0.06 8.66 -39.53 -0.34 -0.29 16 23 C -0.21 0.06 9.03 -39.47 -0.36 -0.29 16 24 H 0.10 -0.19 8.14 -51.93 -0.42 -0.61 16 25 H 0.06 -0.13 7.65 -51.93 -0.40 -0.53 16 26 H 0.06 -0.15 7.67 -51.93 -0.40 -0.54 16 27 H 0.40 -0.51 6.63 -40.82 -0.27 -0.79 16 28 H 0.08 -0.03 7.80 -51.93 -0.41 -0.44 16 29 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 30 H 0.08 -0.11 8.14 -51.93 -0.42 -0.54 16 31 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 32 H 0.07 -0.07 8.14 -51.93 -0.42 -0.49 16 33 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 34 H 0.08 -0.17 8.14 -51.93 -0.42 -0.59 16 35 H 0.08 -0.05 8.14 -51.93 -0.42 -0.48 16 36 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 37 H 0.07 0.12 7.80 -51.93 -0.41 -0.28 16 38 H 0.07 0.22 8.14 -51.93 -0.42 -0.21 16 39 H 0.14 -0.22 6.40 -52.49 -0.34 -0.56 16 40 H 0.12 -0.27 7.96 -51.92 -0.41 -0.68 16 41 H 0.38 -0.92 8.70 45.56 0.40 -0.53 16 42 H -0.26 -0.02 7.11 56.52 0.40 0.38 16 43 H -0.26 -0.42 7.11 56.52 0.40 -0.02 16 44 H 0.13 -0.44 4.85 -52.49 -0.25 -0.70 16 45 H 0.14 -0.35 6.30 -52.49 -0.33 -0.69 16 LS Contribution 360.05 15.07 5.43 5.43 Total: 0.00 -8.29 360.05 -9.55 -17.84 By element: Atomic # 1 Polarization: -3.85 SS G_CDS: -6.63 Total: -10.48 kcal Atomic # 6 Polarization: 2.85 SS G_CDS: -2.00 Total: 0.85 kcal Atomic # 7 Polarization: -0.66 SS G_CDS: -0.28 Total: -0.94 kcal Atomic # 8 Polarization: -4.79 SS G_CDS: -1.04 Total: -5.83 kcal Atomic # 9 Polarization: -0.57 SS G_CDS: 0.04 Total: -0.53 kcal Atomic # 14 Polarization: -1.27 SS G_CDS: -5.06 Total: -6.33 kcal Total LS contribution 5.43 Total: 5.43 kcal Total: -8.29 -9.55 -17.84 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16738386_12496546.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -114.387 kcal (2) G-P(sol) polarization free energy of solvation -8.290 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -122.676 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.548 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.838 kcal (6) G-S(sol) free energy of system = (1) + (5) -132.224 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.95 seconds