Wall clock time and date at job start Tue Mar 9 2021 14:20:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.53000 * 1 3 3 F 1.39902 * 109.46761 * 2 1 4 4 C 1.52996 * 109.47038 * 119.99394 * 2 1 3 5 5 C 1.53003 * 109.46883 * 180.02562 * 4 2 1 6 6 C 1.53006 * 109.47062 * 299.99688 * 5 4 2 7 7 H 1.08997 * 109.47009 * 300.00517 * 6 5 4 8 8 N 1.46498 * 109.47013 * 180.02562 * 6 5 4 9 9 C 1.34776 * 119.99954 * 85.00613 * 8 6 5 10 10 O 1.21282 * 119.99930 * 359.97438 * 9 8 6 11 11 C 1.50697 * 119.99817 * 179.97438 * 9 8 6 12 12 C 1.50698 * 109.47013 * 185.68405 * 11 9 8 13 13 C 1.39309 * 120.06617 * 83.18285 * 12 11 9 14 14 C 1.48391 * 120.11892 * 0.02562 * 13 12 11 15 15 C 1.39339 * 120.12382 * 236.04724 * 14 13 12 16 16 C 1.38013 * 119.88218 * 180.02562 * 15 14 13 17 17 C 1.38330 * 120.11826 * 359.97438 * 16 15 14 18 18 C 1.50703 * 119.87782 * 179.97438 * 17 16 15 19 19 O 1.42898 * 109.47233 * 300.00829 * 18 17 16 20 20 Si 1.86297 * 109.47148 * 180.02562 * 18 17 16 21 21 C 1.38317 * 120.24241 * 0.25826 * 17 16 15 22 22 C 1.38016 * 120.12368 * 359.48280 * 21 17 16 23 23 C 1.39359 * 119.76254 * 179.72731 * 13 12 11 24 24 C 1.37998 * 119.87643 * 0.25004 * 23 13 12 25 25 C 1.38340 * 120.11844 * 0.02562 * 24 23 13 26 26 C 1.38051 * 120.06021 * 263.41397 * 12 11 9 27 27 C 1.52998 * 109.46501 * 60.00281 * 6 5 4 28 28 C 1.52995 * 109.47307 * 239.99921 * 2 1 3 29 29 H 1.09002 * 109.47034 * 180.02562 * 1 2 3 30 30 H 1.09002 * 109.47690 * 299.99934 * 1 2 3 31 31 H 1.09002 * 109.47577 * 60.00659 * 1 2 3 32 32 H 1.08997 * 109.47457 * 300.00090 * 4 2 1 33 33 H 1.08996 * 109.47469 * 60.00464 * 4 2 1 34 34 H 1.09009 * 109.47111 * 180.02562 * 5 4 2 35 35 H 1.08997 * 109.47631 * 59.99824 * 5 4 2 36 36 H 0.97002 * 119.99552 * 265.00257 * 8 6 5 37 37 H 1.08998 * 109.47352 * 65.68054 * 11 9 8 38 38 H 1.09004 * 109.47079 * 305.68247 * 11 9 8 39 39 H 1.08005 * 120.05692 * 0.04000 * 15 14 13 40 40 H 1.07995 * 119.94521 * 179.97438 * 16 15 14 41 41 H 1.09001 * 109.46648 * 60.00320 * 18 17 16 42 42 H 0.96703 * 113.99766 * 180.02562 * 19 18 17 43 43 H 1.48506 * 109.99848 * 298.68366 * 20 18 17 44 44 H 1.48493 * 109.99806 * 60.00143 * 20 18 17 45 45 H 1.07998 * 119.94016 * 179.74360 * 21 17 16 46 46 H 1.08003 * 120.06389 * 180.25515 * 22 21 17 47 47 H 1.08001 * 120.05686 * 180.27175 * 23 13 12 48 48 H 1.07995 * 119.93869 * 179.97438 * 24 23 13 49 49 H 1.08001 * 119.87392 * 179.97438 * 25 24 23 50 50 H 1.08001 * 119.93763 * 0.02619 * 26 12 11 51 51 H 1.08996 * 109.47634 * 59.99986 * 27 6 5 52 52 H 1.09008 * 109.47354 * 179.97438 * 27 6 5 53 53 H 1.08996 * 109.47552 * 59.99578 * 28 2 1 54 54 H 1.09002 * 109.47050 * 299.99962 * 28 2 1 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 9 1.9963 1.3190 0.0000 4 6 2.0400 -0.7211 1.2493 5 6 3.5700 -0.7205 1.2496 6 6 4.0805 -1.4416 0.0004 7 1 3.7175 -2.4694 0.0003 8 7 5.5455 -1.4416 0.0010 9 6 6.2191 -2.3979 0.6705 10 8 5.6124 -3.2581 1.2729 11 6 7.7261 -2.3981 0.6706 12 6 8.2281 -3.6371 1.3663 13 6 8.3256 -4.8386 0.6680 14 6 7.9362 -4.9022 -0.7625 15 6 6.9736 -5.8166 -1.1852 16 6 6.6156 -5.8718 -2.5170 17 6 7.2102 -5.0211 -3.4315 18 6 6.8156 -5.0865 -4.8844 19 8 7.0919 -6.3923 -5.3948 20 14 7.7886 -3.8244 -5.8495 21 6 8.1698 -4.1148 -3.0181 22 6 8.5316 -4.0473 -1.6879 23 6 8.7961 -5.9791 1.3160 24 6 9.1577 -5.9141 2.6462 25 6 9.0534 -4.7197 3.3363 26 6 8.5877 -3.5847 2.6981 27 6 3.5704 -0.7204 -1.2488 28 6 2.0400 -0.7212 -1.2492 29 1 -0.3633 -1.0277 0.0005 30 1 -0.3634 0.5138 0.8900 31 1 -0.3634 0.5137 -0.8900 32 1 1.6766 -0.2072 2.1392 33 1 1.6767 -1.7488 1.2494 34 1 3.9334 -1.2347 2.1394 35 1 3.9330 0.3072 1.2497 36 1 6.0306 -0.7533 -0.4806 37 1 8.0896 -1.5144 1.1950 38 1 8.0895 -2.3859 -0.3570 39 1 6.5083 -6.4808 -0.4719 40 1 5.8699 -6.5804 -2.8458 41 1 5.7505 -4.8763 -4.9814 42 1 6.8625 -6.5068 -6.3272 43 1 7.4862 -2.4592 -5.3494 44 1 9.2423 -4.1005 -5.7252 45 1 8.6339 -3.4558 -3.7369 46 1 9.2780 -3.3364 -1.3656 47 1 8.8778 -6.9120 0.7781 48 1 9.5220 -6.7974 3.1495 49 1 9.3372 -4.6734 4.3774 50 1 8.5086 -2.6547 3.2416 51 1 3.9334 0.3073 -1.2488 52 1 3.9345 -1.2338 -2.1389 53 1 1.6767 -0.2075 -2.1392 54 1 1.6767 -1.7489 -1.2492 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16738386_13158394.mol2 54 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:20:32 Heat of formation + Delta-G solvation = -70.740312 kcal Electronic energy + Delta-G solvation = -36460.926595 eV Core-core repulsion = 31856.695240 eV Total energy + Delta-G solvation = -4604.231355 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 384.189 amu Computer time = 1.88 seconds Orbital eigenvalues (eV) -48.70045 -41.63666 -40.70258 -39.71630 -38.69468 -37.55958 -35.43052 -34.43002 -33.64857 -32.20441 -32.06938 -32.03551 -30.85590 -28.98764 -26.96059 -26.48554 -24.18574 -24.07849 -23.49168 -23.08643 -22.26365 -21.75220 -21.38733 -20.74564 -18.48426 -18.39137 -18.07922 -17.65259 -17.13061 -16.92760 -16.86860 -16.67230 -16.54851 -16.24492 -16.12220 -15.73775 -15.63433 -15.18367 -15.04410 -14.86351 -14.76076 -14.55499 -14.47496 -14.11308 -13.95802 -13.85793 -13.84408 -13.60117 -13.49897 -13.38824 -13.25346 -13.20803 -13.06548 -12.94217 -12.65655 -12.56248 -12.22983 -12.19916 -12.10342 -12.05647 -11.83170 -11.74431 -11.49466 -11.17819 -10.95650 -10.44698 -10.16370 -10.13328 -10.09402 -9.80966 -9.30537 -4.94207 -0.21301 0.20230 0.33930 0.51713 1.29306 1.58886 1.63191 1.96092 2.10192 2.47340 2.79675 3.34942 3.36947 3.45704 3.50023 3.59588 3.60102 3.65592 3.72695 3.76635 3.81012 3.83776 3.93398 3.95380 4.00741 4.11253 4.19827 4.21620 4.25237 4.25951 4.34563 4.34948 4.43685 4.44913 4.50906 4.56160 4.59738 4.62551 4.71407 4.72369 4.74637 4.85087 4.88160 4.91350 4.93739 5.00281 5.02002 5.09290 5.15114 5.16899 5.19185 5.28317 5.34260 5.34910 5.45069 5.46021 5.51100 5.56284 5.77952 5.98104 6.48176 6.88796 7.20383 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.174 4.174 2 C 0.112 3.888 3 F -0.223 7.223 4 C -0.135 4.135 5 C -0.125 4.125 6 C 0.150 3.850 7 H 0.070 0.930 8 N -0.719 5.719 9 C 0.518 3.482 10 O -0.569 6.569 11 C -0.112 4.112 12 C -0.062 4.062 13 C -0.053 4.053 14 C -0.041 4.041 15 C -0.110 4.110 16 C -0.094 4.094 17 C -0.088 4.088 18 C -0.082 4.082 19 O -0.565 6.565 20 Si 0.772 3.228 21 C -0.132 4.132 22 C -0.110 4.110 23 C -0.119 4.119 24 C -0.124 4.124 25 C -0.122 4.122 26 C -0.116 4.116 27 C -0.122 4.122 28 C -0.133 4.133 29 H 0.089 0.911 30 H 0.065 0.935 31 H 0.072 0.928 32 H 0.076 0.924 33 H 0.089 0.911 34 H 0.053 0.947 35 H 0.067 0.933 36 H 0.413 0.587 37 H 0.130 0.870 38 H 0.119 0.881 39 H 0.123 0.877 40 H 0.134 0.866 41 H 0.093 0.907 42 H 0.403 0.597 43 H -0.279 1.279 44 H -0.297 1.297 45 H 0.124 0.876 46 H 0.145 0.855 47 H 0.127 0.873 48 H 0.142 0.858 49 H 0.143 0.857 50 H 0.138 0.862 51 H 0.076 0.924 52 H 0.082 0.918 53 H 0.089 0.911 54 H 0.093 0.907 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.230 2.377 -5.148 5.803 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.231 4.231 2 C 0.094 3.906 3 F -0.204 7.204 4 C -0.173 4.173 5 C -0.163 4.163 6 C 0.045 3.955 7 H 0.088 0.912 8 N -0.371 5.371 9 C 0.306 3.694 10 O -0.448 6.448 11 C -0.152 4.152 12 C -0.063 4.063 13 C -0.053 4.053 14 C -0.041 4.041 15 C -0.128 4.128 16 C -0.112 4.112 17 C -0.088 4.088 18 C -0.191 4.191 19 O -0.375 6.375 20 Si 0.678 3.322 21 C -0.150 4.150 22 C -0.128 4.128 23 C -0.137 4.137 24 C -0.142 4.142 25 C -0.140 4.140 26 C -0.134 4.134 27 C -0.160 4.160 28 C -0.171 4.171 29 H 0.107 0.893 30 H 0.084 0.916 31 H 0.091 0.909 32 H 0.095 0.905 33 H 0.107 0.893 34 H 0.072 0.928 35 H 0.086 0.914 36 H 0.249 0.751 37 H 0.148 0.852 38 H 0.136 0.864 39 H 0.141 0.859 40 H 0.152 0.848 41 H 0.110 0.890 42 H 0.254 0.746 43 H -0.206 1.206 44 H -0.225 1.225 45 H 0.142 0.858 46 H 0.163 0.837 47 H 0.145 0.855 48 H 0.160 0.840 49 H 0.161 0.839 50 H 0.156 0.844 51 H 0.094 0.906 52 H 0.101 0.899 53 H 0.108 0.892 54 H 0.112 0.888 Dipole moment (debyes) X Y Z Total from point charges -0.869 2.333 -4.099 4.796 hybrid contribution 0.090 0.023 0.685 0.692 sum -0.779 2.356 -3.414 4.221 Atomic orbital electron populations 1.22382 0.92472 1.04613 1.03666 1.21103 0.95233 0.77369 0.96896 1.92813 1.90572 1.39268 1.97731 1.22084 0.95407 1.02194 0.97618 1.21814 0.95657 1.00880 0.97984 1.20905 0.79486 0.99785 0.95294 0.91201 1.45991 1.07094 1.30597 1.53405 1.20780 0.90336 0.80527 0.77781 1.90713 1.71027 1.38567 1.44488 1.20957 0.91311 0.98304 1.04584 1.19426 0.98955 0.93533 0.94344 1.18696 1.00411 0.93904 0.92279 1.18850 0.96615 0.96464 0.92199 1.21368 0.96985 0.98354 0.96048 1.21065 0.99789 0.98187 0.92137 1.19755 0.96981 0.96832 0.95211 1.24895 1.06343 0.93972 0.93908 1.86446 1.88214 1.29945 1.32888 0.94372 0.76267 0.74077 0.87514 1.20932 0.97860 0.99838 0.96335 1.21261 1.00127 0.99311 0.92056 1.21354 0.99300 0.97655 0.95398 1.21375 0.99759 0.98965 0.94118 1.21496 0.98898 0.92610 1.00977 1.21223 0.98825 0.99776 0.93592 1.21743 0.95924 1.01447 0.96863 1.22096 0.95205 1.02483 0.97337 0.89257 0.91585 0.90936 0.90521 0.89283 0.92821 0.91397 0.75094 0.85194 0.86358 0.85903 0.84773 0.88960 0.74551 1.20603 1.22537 0.85841 0.83692 0.85518 0.84044 0.83934 0.84398 0.90578 0.89902 0.89237 0.88824 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.17 0.50 8.93 71.98 0.64 1.15 16 2 C 0.11 -0.06 1.23 -10.80 -0.01 -0.07 16 3 F -0.22 -1.06 15.77 44.97 0.71 -0.35 16 4 C -0.13 -0.04 5.00 30.59 0.15 0.12 16 5 C -0.12 -0.30 5.37 30.60 0.16 -0.14 16 6 C 0.15 0.19 2.45 44.99 0.11 0.30 16 7 H 0.07 0.39 7.58 -2.39 -0.02 0.37 16 8 N -0.72 -0.23 5.08 -442.54 -2.25 -2.48 16 9 C 0.52 2.81 7.73 87.66 0.68 3.49 16 10 O -0.57 -8.11 15.71 -3.04 -0.05 -8.16 16 11 C -0.11 -0.08 5.32 29.10 0.15 0.07 16 12 C -0.06 -0.34 4.38 -19.65 -0.09 -0.42 16 13 C -0.05 -0.39 5.40 -20.04 -0.11 -0.50 16 14 C -0.04 -0.29 4.88 -20.04 -0.10 -0.39 16 15 C -0.11 -0.87 9.62 22.48 0.22 -0.65 16 16 C -0.09 -0.61 9.59 22.24 0.21 -0.40 16 17 C -0.09 -0.47 5.43 -19.82 -0.11 -0.57 16 18 C -0.08 0.04 2.81 71.24 0.20 0.24 16 19 O -0.57 -0.08 12.74 -148.98 -1.90 -1.98 16 20 Si 0.77 -2.15 29.78 68.60 2.04 -0.11 16 21 C -0.13 -0.66 8.65 22.24 0.19 -0.47 16 22 C -0.11 -0.49 7.77 22.48 0.17 -0.32 16 23 C -0.12 -0.79 9.62 22.48 0.22 -0.57 16 24 C -0.12 -0.54 10.03 22.24 0.22 -0.32 16 25 C -0.12 -0.44 10.04 22.31 0.22 -0.22 16 26 C -0.12 -0.50 9.67 22.24 0.21 -0.28 16 27 C -0.12 0.31 5.27 30.61 0.16 0.47 16 28 C -0.13 0.43 5.00 30.61 0.15 0.58 16 29 H 0.09 -0.49 8.14 -2.39 -0.02 -0.51 16 30 H 0.07 -0.13 8.14 -2.39 -0.02 -0.15 16 31 H 0.07 -0.24 8.14 -2.39 -0.02 -0.26 16 32 H 0.08 0.04 8.14 -2.39 -0.02 0.02 16 33 H 0.09 -0.08 8.14 -2.39 -0.02 -0.10 16 34 H 0.05 0.35 8.14 -2.38 -0.02 0.33 16 35 H 0.07 0.20 7.80 -2.39 -0.02 0.18 16 36 H 0.41 -2.14 8.60 -92.71 -0.80 -2.94 16 37 H 0.13 -0.62 8.04 -2.39 -0.02 -0.64 16 38 H 0.12 -0.22 4.69 -2.39 -0.01 -0.24 16 39 H 0.12 0.95 8.06 -2.91 -0.02 0.93 16 40 H 0.13 0.59 8.06 -2.91 -0.02 0.57 16 41 H 0.09 -0.40 7.96 -2.39 -0.02 -0.42 16 42 H 0.40 -4.25 8.74 -74.05 -0.65 -4.90 16 43 H -0.28 -0.30 7.11 99.48 0.71 0.40 16 44 H -0.30 -1.51 7.11 99.48 0.71 -0.80 16 45 H 0.12 0.39 4.86 -2.91 -0.01 0.38 16 46 H 0.15 0.03 7.09 -2.91 -0.02 0.01 16 47 H 0.13 0.61 8.06 -2.91 -0.02 0.58 16 48 H 0.14 0.00 8.06 -2.91 -0.02 -0.02 16 49 H 0.14 -0.13 8.06 -2.91 -0.02 -0.15 16 50 H 0.14 0.04 8.06 -2.91 -0.02 0.01 16 51 H 0.08 -0.17 7.80 -2.39 -0.02 -0.19 16 52 H 0.08 -0.31 8.14 -2.38 -0.02 -0.33 16 53 H 0.09 -0.40 8.14 -2.39 -0.02 -0.42 16 54 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 Total: 0.00 -22.49 432.29 1.75 -20.74 By element: Atomic # 1 Polarization: -8.27 SS G_CDS: -0.49 Total: -8.76 kcal Atomic # 6 Polarization: -2.59 SS G_CDS: 3.68 Total: 1.09 kcal Atomic # 7 Polarization: -0.23 SS G_CDS: -2.25 Total: -2.48 kcal Atomic # 8 Polarization: -8.19 SS G_CDS: -1.95 Total: -10.14 kcal Atomic # 9 Polarization: -1.06 SS G_CDS: 0.71 Total: -0.35 kcal Atomic # 14 Polarization: -2.15 SS G_CDS: 2.04 Total: -0.11 kcal Total: -22.49 1.75 -20.74 kcal The number of atoms in the molecule is 54 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16738386_13158394.mol2 54 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -49.999 kcal (2) G-P(sol) polarization free energy of solvation -22.494 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -72.493 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.752 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.741 kcal (6) G-S(sol) free energy of system = (1) + (5) -70.740 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.89 seconds