Wall clock time and date at job start Tue Mar 9 2021 14:25:59 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.52997 * 1 3 3 F 1.39905 * 109.47157 * 2 1 4 4 C 1.52997 * 109.47232 * 120.00009 * 2 1 3 5 5 C 1.52997 * 109.47232 * 179.97438 * 4 2 1 6 6 C 1.53002 * 109.47143 * 300.00043 * 5 4 2 7 7 H 1.09002 * 109.47593 * 300.00023 * 6 5 4 8 8 N 1.46499 * 109.47125 * 179.97438 * 6 5 4 9 9 C 1.34778 * 119.99771 * 85.00369 * 8 6 5 10 10 O 1.21273 * 120.00144 * 359.97438 * 9 8 6 11 11 C 1.50703 * 119.99935 * 179.97438 * 9 8 6 12 12 N 1.46499 * 109.47337 * 179.97438 * 11 9 8 13 13 C 1.36834 * 125.06023 * 265.03155 * 12 11 9 14 14 C 1.34240 * 109.93490 * 179.97438 * 13 12 11 15 15 C 1.50700 * 126.49749 * 180.02562 * 14 13 12 16 16 O 1.42898 * 109.47140 * 254.97355 * 15 14 13 17 17 Si 1.86296 * 109.47299 * 14.97133 * 15 14 13 18 18 C 1.46487 * 107.00262 * 359.97438 * 14 13 12 19 19 C 1.39589 * 134.04466 * 180.02562 * 18 14 13 20 20 C 1.36657 * 119.77132 * 179.97438 * 19 18 14 21 21 C 1.38795 * 120.52642 * 359.97438 * 20 19 18 22 22 C 1.37788 * 120.66285 * 359.97438 * 21 20 19 23 23 C 1.37690 * 125.06340 * 84.71867 * 12 11 9 24 24 C 1.53000 * 109.46911 * 60.00192 * 6 5 4 25 25 C 1.53001 * 109.46886 * 299.99531 * 24 6 5 26 26 H 1.09000 * 109.47611 * 59.99495 * 1 2 3 27 27 H 1.09002 * 109.47153 * 179.97438 * 1 2 3 28 28 H 1.09001 * 109.47289 * 300.00066 * 1 2 3 29 29 H 1.09001 * 109.47375 * 299.99867 * 4 2 1 30 30 H 1.09002 * 109.47045 * 59.99942 * 4 2 1 31 31 H 1.09000 * 109.47611 * 180.02562 * 5 4 2 32 32 H 1.09002 * 109.47153 * 60.00008 * 5 4 2 33 33 H 0.96998 * 120.00057 * 264.99604 * 8 6 5 34 34 H 1.09005 * 109.47169 * 300.00062 * 11 9 8 35 35 H 1.08999 * 109.47030 * 59.99811 * 11 9 8 36 36 H 1.07999 * 125.03588 * 359.95314 * 13 12 11 37 37 H 1.09003 * 109.47173 * 134.97234 * 15 14 13 38 38 H 0.96700 * 114.00213 * 59.99719 * 16 15 14 39 39 H 1.48508 * 109.99958 * 58.68297 * 17 15 14 40 40 H 1.48501 * 110.00154 * 180.02562 * 17 15 14 41 41 H 1.08006 * 120.11069 * 359.95326 * 19 18 14 42 42 H 1.07994 * 119.74110 * 179.97438 * 20 19 18 43 43 H 1.08001 * 119.66359 * 180.02562 * 21 20 19 44 44 H 1.08004 * 120.10492 * 180.02562 * 22 21 20 45 45 H 1.09001 * 109.47194 * 180.02562 * 24 6 5 46 46 H 1.08992 * 109.47852 * 59.99752 * 24 6 5 47 47 H 1.08992 * 109.47514 * 300.00434 * 25 24 6 48 48 H 1.09004 * 109.47086 * 180.02562 * 25 24 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5300 0.0000 0.0000 3 9 1.9963 1.3190 0.0000 4 6 2.0400 -0.7212 1.2492 5 6 3.5700 -0.7218 1.2489 6 6 4.0795 -1.4434 -0.0004 7 1 3.7158 -2.4710 -0.0002 8 7 5.5444 -1.4434 -0.0010 9 6 6.2186 -2.3994 0.6684 10 8 5.6124 -3.2593 1.2717 11 6 7.7256 -2.3998 0.6674 12 7 8.2143 -3.5306 1.4602 13 6 8.5687 -3.4700 2.7805 14 6 8.9716 -4.6791 3.2021 15 6 9.4421 -5.0338 4.5892 16 8 10.8627 -5.1880 4.5854 17 14 8.9682 -3.6749 5.7721 18 6 8.8661 -5.5886 2.0587 19 6 9.1327 -6.9458 1.8704 20 6 8.9238 -7.5148 0.6456 21 6 8.4478 -6.7541 -0.4132 22 6 8.1770 -5.4131 -0.2492 23 6 8.3795 -4.8139 0.9896 24 6 3.5695 -0.7221 -1.2496 25 6 2.0395 -0.7216 -1.2493 26 1 -0.3634 0.5139 -0.8899 27 1 -0.3633 -1.0277 -0.0005 28 1 -0.3634 0.5138 0.8900 29 1 1.6767 -0.2074 2.1392 30 1 1.6766 -1.7489 1.2492 31 1 3.9334 -1.2360 2.1386 32 1 3.9337 0.3058 1.2487 33 1 6.0292 -0.7555 -0.4833 34 1 8.0882 -2.4899 -0.3567 35 1 8.0894 -1.4683 1.1010 36 1 8.5304 -2.5811 3.3926 37 1 8.9760 -5.9678 4.9032 38 1 11.3439 -4.3939 4.3153 39 1 7.4956 -3.4829 5.7617 40 1 9.4271 -4.0123 7.1436 41 1 9.5032 -7.5440 2.6898 42 1 9.1306 -8.5647 0.5003 43 1 8.2873 -7.2181 -1.3752 44 1 7.8065 -4.8297 -1.0791 45 1 3.9320 -1.2364 -2.1396 46 1 3.9331 0.3054 -1.2499 47 1 1.6758 -1.7491 -1.2490 48 1 1.6761 -0.2081 -2.1395 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16738386_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:25:59 Heat of formation + Delta-G solvation = -56.133347 kcal Electronic energy + Delta-G solvation = -30857.886884 eV Core-core repulsion = 26600.852923 eV Total energy + Delta-G solvation = -4257.033961 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.168 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -48.69565 -42.53946 -40.94291 -38.87592 -38.08973 -37.57968 -35.49486 -34.09674 -32.37139 -32.03261 -31.31021 -30.23946 -29.03505 -27.07510 -25.61069 -24.09481 -23.77658 -22.92260 -22.31130 -21.60713 -20.89510 -20.59870 -18.67406 -18.42654 -17.81270 -17.42735 -17.12005 -16.81765 -16.54519 -16.43980 -16.30751 -16.03633 -15.99890 -15.44064 -15.39369 -14.95061 -14.76602 -14.66909 -14.54397 -14.45601 -14.07260 -13.86041 -13.67257 -13.59788 -13.33999 -13.20544 -13.15434 -12.96895 -12.72608 -12.65939 -12.58885 -12.27446 -12.19586 -12.13204 -11.82846 -11.81877 -11.51802 -11.18561 -11.06150 -10.55518 -10.31819 -10.17655 -9.16486 -8.63332 -5.06623 0.13340 0.62436 1.33075 1.42183 1.45685 1.63250 1.74698 1.98480 2.18833 2.93710 3.36928 3.47997 3.55317 3.60438 3.65283 3.68286 3.69622 3.76158 3.85831 3.87519 3.96385 4.04830 4.16462 4.20279 4.21256 4.25706 4.29260 4.35764 4.47299 4.55479 4.55555 4.60144 4.70367 4.70628 4.73100 4.77675 4.87491 4.92088 4.95502 5.01753 5.07890 5.12289 5.15269 5.16361 5.34358 5.41819 5.49518 5.64898 5.72405 5.74525 6.19186 6.23041 6.47779 6.88335 7.13576 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.176 4.176 2 C 0.113 3.887 3 F -0.222 7.222 4 C -0.136 4.136 5 C -0.125 4.125 6 C 0.149 3.851 7 H 0.068 0.932 8 N -0.709 5.709 9 C 0.491 3.509 10 O -0.572 6.572 11 C 0.088 3.912 12 N -0.466 5.466 13 C 0.079 3.921 14 C -0.225 4.225 15 C -0.040 4.040 16 O -0.560 6.560 17 Si 0.800 3.200 18 C -0.118 4.118 19 C -0.091 4.091 20 C -0.154 4.154 21 C -0.108 4.108 22 C -0.133 4.133 23 C 0.091 3.909 24 C -0.121 4.121 25 C -0.136 4.136 26 H 0.071 0.929 27 H 0.087 0.913 28 H 0.064 0.936 29 H 0.075 0.925 30 H 0.085 0.915 31 H 0.052 0.948 32 H 0.073 0.927 33 H 0.420 0.580 34 H 0.145 0.855 35 H 0.167 0.833 36 H 0.207 0.793 37 H 0.088 0.912 38 H 0.393 0.607 39 H -0.295 1.295 40 H -0.297 1.297 41 H 0.116 0.884 42 H 0.136 0.864 43 H 0.146 0.854 44 H 0.134 0.866 45 H 0.088 0.912 46 H 0.080 0.920 47 H 0.091 0.909 48 H 0.088 0.912 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.430 7.390 -5.585 9.273 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.233 4.233 2 C 0.095 3.905 3 F -0.202 7.202 4 C -0.175 4.175 5 C -0.164 4.164 6 C 0.044 3.956 7 H 0.087 0.913 8 N -0.362 5.362 9 C 0.277 3.723 10 O -0.450 6.450 11 C -0.037 4.037 12 N -0.148 5.148 13 C -0.046 4.046 14 C -0.232 4.232 15 C -0.150 4.150 16 O -0.368 6.368 17 Si 0.705 3.295 18 C -0.122 4.122 19 C -0.110 4.110 20 C -0.173 4.173 21 C -0.127 4.127 22 C -0.153 4.153 23 C -0.014 4.014 24 C -0.159 4.159 25 C -0.174 4.174 26 H 0.090 0.910 27 H 0.106 0.894 28 H 0.083 0.917 29 H 0.093 0.907 30 H 0.104 0.896 31 H 0.071 0.929 32 H 0.091 0.909 33 H 0.258 0.742 34 H 0.162 0.838 35 H 0.184 0.816 36 H 0.224 0.776 37 H 0.105 0.895 38 H 0.243 0.757 39 H -0.223 1.223 40 H -0.225 1.225 41 H 0.134 0.866 42 H 0.153 0.847 43 H 0.163 0.837 44 H 0.152 0.848 45 H 0.106 0.894 46 H 0.099 0.901 47 H 0.110 0.890 48 H 0.107 0.893 Dipole moment (debyes) X Y Z Total from point charges -0.686 6.716 -4.440 8.080 hybrid contribution -0.260 -0.621 -0.169 0.694 sum -0.946 6.094 -4.609 7.699 Atomic orbital electron populations 1.22393 0.92793 1.04493 1.03629 1.21082 0.95055 0.77442 0.96961 1.92816 1.90516 1.39178 1.97732 1.22087 0.95777 1.02018 0.97592 1.21814 0.95397 1.01175 0.97978 1.20913 0.79564 0.99776 0.95324 0.91347 1.45891 1.06958 1.30394 1.52908 1.21511 0.91347 0.81041 0.78440 1.90801 1.70920 1.38855 1.44459 1.22012 0.89788 0.91146 1.00709 1.43453 1.55065 1.06819 1.09489 1.22058 0.99171 0.99343 0.84057 1.20779 1.13057 0.93367 0.96017 1.24560 0.84373 1.08411 0.97636 1.86450 1.16322 1.42984 1.90996 0.94137 0.77953 0.82343 0.75018 1.19369 1.04679 0.94157 0.94022 1.20445 0.99504 0.93152 0.97896 1.20910 1.02503 1.00913 0.92960 1.21131 0.98777 0.93043 0.99786 1.20254 1.04821 0.95709 0.94552 1.18390 1.02523 0.84957 0.95522 1.21738 0.95506 1.01737 0.96889 1.22102 0.95728 1.02333 0.97206 0.90973 0.89441 0.91654 0.90657 0.89596 0.92929 0.90878 0.74225 0.83775 0.81561 0.77650 0.89452 0.75685 1.22297 1.22484 0.86609 0.84662 0.83650 0.84836 0.89376 0.90147 0.89050 0.89314 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.18 0.65 8.93 71.98 0.64 1.29 16 2 C 0.11 -0.24 1.23 -10.79 -0.01 -0.25 16 3 F -0.22 -0.60 15.77 44.97 0.71 0.11 16 4 C -0.14 0.19 5.00 30.59 0.15 0.35 16 5 C -0.12 0.09 5.37 30.59 0.16 0.25 16 6 C 0.15 -0.42 2.45 44.99 0.11 -0.31 16 7 H 0.07 0.15 7.58 -2.39 -0.02 0.13 16 8 N -0.71 4.46 5.08 -442.53 -2.25 2.21 16 9 C 0.49 -0.44 7.86 87.66 0.69 0.25 16 10 O -0.57 -6.30 16.08 -3.01 -0.05 -6.35 16 11 C 0.09 -0.66 6.48 85.63 0.56 -0.11 16 12 N -0.47 -0.67 2.27 -519.98 -1.18 -1.85 16 13 C 0.08 0.06 9.89 83.00 0.82 0.88 16 14 C -0.22 -1.36 5.58 -18.63 -0.10 -1.46 16 15 C -0.04 -0.19 3.06 71.24 0.22 0.03 16 16 O -0.56 -2.49 12.88 -148.98 -1.92 -4.41 16 17 Si 0.80 0.01 30.75 68.60 2.11 2.12 16 18 C -0.12 -1.24 6.35 -20.20 -0.13 -1.37 16 19 C -0.09 -0.96 10.05 22.23 0.22 -0.74 16 20 C -0.15 -1.13 9.97 22.03 0.22 -0.91 16 21 C -0.11 -0.57 10.01 22.30 0.22 -0.35 16 22 C -0.13 -0.72 10.00 22.37 0.22 -0.50 16 23 C 0.09 0.68 6.79 39.03 0.27 0.95 16 24 C -0.12 0.76 5.27 30.59 0.16 0.92 16 25 C -0.14 0.71 5.00 30.60 0.15 0.86 16 26 H 0.07 -0.29 8.14 -2.39 -0.02 -0.31 16 27 H 0.09 -0.52 8.14 -2.39 -0.02 -0.54 16 28 H 0.06 -0.17 8.14 -2.39 -0.02 -0.19 16 29 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 30 H 0.09 -0.17 8.14 -2.39 -0.02 -0.19 16 31 H 0.05 0.19 8.14 -2.39 -0.02 0.17 16 32 H 0.07 -0.07 7.80 -2.39 -0.02 -0.09 16 33 H 0.42 -5.64 8.60 -92.71 -0.80 -6.43 16 34 H 0.14 -1.81 8.14 -2.38 -0.02 -1.83 16 35 H 0.17 -2.68 8.12 -2.39 -0.02 -2.70 16 36 H 0.21 -1.64 6.35 -2.91 -0.02 -1.66 16 37 H 0.09 0.72 7.96 -2.39 -0.02 0.70 16 38 H 0.39 -1.87 8.70 -74.06 -0.64 -2.51 16 39 H -0.30 -1.94 7.11 99.48 0.71 -1.23 16 40 H -0.30 -2.08 7.11 99.48 0.71 -1.37 16 41 H 0.12 1.14 8.06 -2.91 -0.02 1.12 16 42 H 0.14 0.44 8.06 -2.91 -0.02 0.42 16 43 H 0.15 0.00 8.06 -2.91 -0.02 -0.03 16 44 H 0.13 0.05 8.06 -2.91 -0.02 0.02 16 45 H 0.09 -0.72 8.14 -2.39 -0.02 -0.74 16 46 H 0.08 -0.52 7.80 -2.39 -0.02 -0.54 16 47 H 0.09 -0.58 8.14 -2.39 -0.02 -0.60 16 48 H 0.09 -0.54 8.14 -2.38 -0.02 -0.56 16 Total: 0.00 -28.98 392.91 1.57 -27.40 By element: Atomic # 1 Polarization: -18.60 SS G_CDS: -0.43 Total: -19.03 kcal Atomic # 6 Polarization: -4.79 SS G_CDS: 4.58 Total: -0.21 kcal Atomic # 7 Polarization: 3.78 SS G_CDS: -3.43 Total: 0.36 kcal Atomic # 8 Polarization: -8.79 SS G_CDS: -1.97 Total: -10.75 kcal Atomic # 9 Polarization: -0.60 SS G_CDS: 0.71 Total: 0.11 kcal Atomic # 14 Polarization: 0.01 SS G_CDS: 2.11 Total: 2.12 kcal Total: -28.98 1.57 -27.40 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16738386_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.730 kcal (2) G-P(sol) polarization free energy of solvation -28.977 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -57.707 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.574 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.403 kcal (6) G-S(sol) free energy of system = (1) + (5) -56.133 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds