Wall clock time and date at job start Tue Mar 9 2021 12:53:13 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86302 * 109.47029 * 2 1 4 4 C 1.50699 * 109.47238 * 240.00255 * 2 1 3 5 5 C 1.38893 * 119.67793 * 119.99868 * 4 2 1 6 6 C 1.36481 * 120.61713 * 180.02562 * 5 4 2 7 7 C 1.40061 * 119.82658 * 359.97438 * 6 5 4 8 8 C 1.41595 * 133.37832 * 180.32504 * 7 6 5 9 9 C 1.35862 * 107.72587 * 180.11243 * 8 7 6 10 10 C 1.47063 * 125.42500 * 179.84950 * 9 8 7 11 11 O 1.21647 * 120.00069 * 359.69430 * 10 9 8 12 12 N 1.34780 * 120.00003 * 179.69534 * 10 9 8 13 13 C 1.46492 * 119.99930 * 179.97438 * 12 10 9 14 14 H 1.09002 * 109.47696 * 34.99761 * 13 12 10 15 15 C 1.53002 * 109.47204 * 155.00105 * 13 12 10 16 16 C 1.53000 * 109.47233 * 180.02562 * 15 13 12 17 17 C 1.52997 * 109.47060 * 299.99657 * 16 15 13 18 18 H 1.09002 * 109.47153 * 300.00319 * 17 16 15 19 19 C 1.52992 * 109.47482 * 180.02562 * 17 16 15 20 20 F 1.39906 * 109.47544 * 179.97438 * 19 17 16 21 21 C 1.52999 * 109.47317 * 59.99960 * 17 16 15 22 22 C 1.52997 * 109.47244 * 274.99857 * 13 12 10 23 23 N 1.38145 * 109.14826 * 359.57961 * 9 8 7 24 24 C 1.37489 * 108.79082 * 0.27016 * 23 9 8 25 25 C 1.37708 * 119.67393 * 300.01468 * 4 2 1 26 26 H 0.96705 * 114.00112 * 60.00253 * 1 2 3 27 27 H 1.08999 * 109.47431 * 119.99620 * 2 1 3 28 28 H 1.48499 * 110.00127 * 59.99943 * 3 2 1 29 29 H 1.48502 * 110.00112 * 181.31989 * 3 2 1 30 30 H 1.08000 * 119.69224 * 0.02562 * 5 4 2 31 31 H 1.08003 * 120.08444 * 179.97438 * 6 5 4 32 32 H 1.07999 * 126.13807 * 359.97438 * 8 7 6 33 33 H 0.96998 * 119.99716 * 359.97438 * 12 10 9 34 34 H 1.08992 * 109.47063 * 59.99836 * 15 13 12 35 35 H 1.09004 * 109.46733 * 299.99549 * 15 13 12 36 36 H 1.09002 * 109.47398 * 59.99826 * 16 15 13 37 37 H 1.09001 * 109.47194 * 180.02562 * 16 15 13 38 38 H 1.09002 * 109.47103 * 300.00247 * 19 17 16 39 39 H 1.09001 * 109.47066 * 60.00169 * 19 17 16 40 40 H 1.09000 * 109.47486 * 180.02562 * 21 17 16 41 41 H 1.09002 * 109.46716 * 60.00091 * 21 17 16 42 42 H 1.09002 * 109.47153 * 300.00242 * 22 13 12 43 43 H 1.09001 * 109.47289 * 60.00326 * 22 13 12 44 44 H 0.97006 * 125.60493 * 180.23623 * 23 9 8 45 45 H 1.07999 * 120.10312 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7294 -0.0289 -2.1403 6 6 3.1944 -0.6533 -3.2612 7 6 2.8660 -1.9940 -3.4989 8 6 3.1852 -2.9045 -4.5352 9 6 2.5831 -4.0876 -4.2463 10 6 2.6562 -5.3045 -5.0688 11 8 3.2921 -5.3004 -6.1059 12 7 2.0187 -6.4244 -4.6737 13 6 2.0911 -7.6363 -5.4933 14 1 3.0743 -7.7018 -5.9593 15 6 1.8630 -8.8642 -4.6094 16 6 1.9392 -10.1301 -5.4654 17 6 0.8631 -10.0767 -6.5517 18 1 -0.1203 -10.0116 -6.0860 19 6 0.9388 -11.3428 -7.4072 20 9 -0.0456 -11.2943 -8.4002 21 6 1.0911 -8.8489 -7.4356 22 6 1.0147 -7.5827 -6.5792 23 7 1.8963 -3.9673 -3.0537 24 6 2.0571 -2.6876 -2.5773 25 6 1.5943 -2.0287 -1.4419 26 1 -0.3934 0.4417 -0.7651 27 1 1.7924 -0.5138 0.8900 28 1 1.5614 2.4679 1.2085 29 1 3.5346 1.7704 -0.0321 30 1 2.9844 1.0048 -1.9590 31 1 3.8141 -0.1150 -3.9632 32 1 3.7958 -2.6953 -5.4011 33 1 1.5120 -6.4277 -3.8465 34 1 0.8798 -8.7988 -4.1435 35 1 2.6299 -8.9025 -3.8358 36 1 2.9226 -10.1953 -5.9310 37 1 1.7762 -11.0048 -4.8357 38 1 1.9222 -11.4084 -7.8728 39 1 0.7760 -12.2173 -6.7773 40 1 0.3242 -8.8106 -8.2092 41 1 2.0745 -8.9141 -7.9012 42 1 0.0314 -7.5173 -6.1133 43 1 1.1772 -6.7080 -7.2090 44 1 1.3844 -4.6700 -2.6234 45 1 0.9733 -2.5502 -0.7286 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16769142_13158378.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:13 Heat of formation + Delta-G solvation = -73.985752 kcal Electronic energy + Delta-G solvation = -27710.478368 eV Core-core repulsion = 23608.207888 eV Total energy + Delta-G solvation = -4102.270480 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 333.153 amu Computer time = 0.80 seconds Orbital eigenvalues (eV) -48.54798 -42.71629 -41.00878 -39.45948 -38.83014 -36.91776 -35.74193 -33.30770 -32.22126 -31.97600 -30.87857 -30.41749 -27.44158 -26.25923 -24.40858 -23.98198 -23.18594 -22.35781 -21.93934 -21.42919 -20.92308 -19.55735 -18.44679 -17.87957 -17.50161 -17.04534 -16.78605 -16.69249 -16.53681 -16.42566 -16.11752 -15.69588 -15.56058 -15.40894 -15.09770 -14.87468 -14.79053 -14.72275 -14.52134 -14.39349 -14.08597 -13.60057 -13.41628 -13.25951 -13.11193 -12.68995 -12.61085 -12.53609 -12.33641 -11.98390 -11.90087 -11.69226 -11.66369 -11.62173 -11.38871 -11.12873 -10.95249 -10.47644 -10.26310 -9.33902 -8.84305 -5.02346 -0.35560 0.50213 0.99058 1.27951 1.64217 1.73500 1.88581 1.98672 2.24905 2.76179 3.30352 3.38056 3.40817 3.48989 3.58642 3.62433 3.68569 3.71668 3.90320 3.99137 4.04728 4.09628 4.18785 4.22600 4.24062 4.26980 4.30472 4.33306 4.42693 4.45558 4.57470 4.58257 4.66197 4.70804 4.84945 4.87473 4.90490 4.93596 4.95151 5.08628 5.14690 5.23360 5.27644 5.35919 5.38866 5.50881 5.59385 5.94714 6.16849 6.32582 6.53986 6.97693 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.068 4.068 3 Si 0.693 3.307 4 C -0.088 4.088 5 C -0.146 4.146 6 C -0.050 4.050 7 C -0.117 4.117 8 C -0.100 4.100 9 C 0.013 3.987 10 C 0.586 3.414 11 O -0.516 6.516 12 N -0.726 5.726 13 C 0.145 3.855 14 H 0.094 0.906 15 C -0.125 4.125 16 C -0.109 4.109 17 C -0.123 4.123 18 H 0.083 0.917 19 C 0.064 3.936 20 F -0.217 7.217 21 C -0.113 4.113 22 C -0.129 4.129 23 N -0.579 5.579 24 C 0.115 3.885 25 C -0.104 4.104 26 H 0.380 0.620 27 H 0.114 0.886 28 H -0.256 1.256 29 H -0.257 1.257 30 H 0.129 0.871 31 H 0.132 0.868 32 H 0.159 0.841 33 H 0.395 0.605 34 H 0.070 0.930 35 H 0.073 0.927 36 H 0.072 0.928 37 H 0.074 0.926 38 H 0.075 0.925 39 H 0.075 0.925 40 H 0.074 0.926 41 H 0.069 0.931 42 H 0.065 0.935 43 H 0.072 0.928 44 H 0.417 0.583 45 H 0.127 0.873 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.090 -0.752 1.851 2.276 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.179 4.179 3 Si 0.595 3.405 4 C -0.090 4.090 5 C -0.165 4.165 6 C -0.069 4.069 7 C -0.121 4.121 8 C -0.127 4.127 9 C -0.096 4.096 10 C 0.372 3.628 11 O -0.390 6.390 12 N -0.377 5.377 13 C 0.041 3.959 14 H 0.112 0.888 15 C -0.163 4.163 16 C -0.147 4.147 17 C -0.142 4.142 18 H 0.102 0.898 19 C 0.009 3.991 20 F -0.198 7.198 21 C -0.151 4.151 22 C -0.167 4.167 23 N -0.183 5.183 24 C 0.005 3.995 25 C -0.125 4.125 26 H 0.227 0.773 27 H 0.131 0.869 28 H -0.181 1.181 29 H -0.182 1.182 30 H 0.147 0.853 31 H 0.150 0.850 32 H 0.176 0.824 33 H 0.229 0.771 34 H 0.089 0.911 35 H 0.092 0.908 36 H 0.091 0.909 37 H 0.093 0.907 38 H 0.094 0.906 39 H 0.093 0.907 40 H 0.093 0.907 41 H 0.088 0.912 42 H 0.084 0.916 43 H 0.091 0.909 44 H 0.255 0.745 45 H 0.145 0.855 Dipole moment (debyes) X Y Z Total from point charges -0.124 -0.641 2.048 2.150 hybrid contribution -0.517 -1.062 0.811 1.433 sum -0.641 -1.704 2.859 3.390 Atomic orbital electron populations 1.86498 1.17076 1.81720 1.49345 1.25078 0.85240 1.10300 0.97287 0.94543 0.81079 0.77885 0.87003 1.20034 0.98334 0.93827 0.96795 1.20490 1.00910 0.99734 0.95355 1.20387 0.97718 0.92097 0.96690 1.18226 1.02665 0.94900 0.96341 1.20982 1.01507 0.90412 0.99760 1.20109 1.03346 0.96632 0.89543 1.17197 0.79207 0.81655 0.84725 1.90883 1.41502 1.83368 1.23296 1.45977 1.53428 1.11762 1.26504 1.21100 1.00896 0.82590 0.91309 0.88805 1.21786 1.02808 0.93601 0.98153 1.21437 0.99122 0.97503 0.96683 1.21837 1.00851 0.94999 0.96502 0.89836 1.22056 0.90192 0.98755 0.88086 1.92778 1.65131 1.97709 1.64177 1.21542 1.02989 0.92796 0.97808 1.21922 0.98733 0.98713 0.97344 1.41892 1.45509 1.11115 1.19823 1.18310 1.00073 0.84605 0.96480 1.19854 1.02583 0.94153 0.95893 0.77262 0.86883 1.18127 1.18205 0.85335 0.84988 0.82387 0.77126 0.91115 0.90807 0.90946 0.90749 0.90633 0.90679 0.90731 0.91247 0.91613 0.90913 0.74519 0.85542 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.16 12.76 -35.23 -0.45 -0.29 16 2 C -0.07 0.05 2.81 36.01 0.10 0.15 16 3 Si 0.69 -0.94 29.75 -169.99 -5.06 -6.00 16 4 C -0.09 0.01 5.40 -104.57 -0.56 -0.55 16 5 C -0.15 0.07 8.59 -39.97 -0.34 -0.27 16 6 C -0.05 -0.01 10.06 -39.53 -0.40 -0.40 16 7 C -0.12 -0.17 6.16 -106.93 -0.66 -0.83 16 8 C -0.10 -0.18 10.53 -39.15 -0.41 -0.59 16 9 C 0.01 0.01 6.97 -82.29 -0.57 -0.56 16 10 C 0.59 1.00 7.76 -12.68 -0.10 0.90 16 11 O -0.52 -2.74 16.50 5.24 0.09 -2.65 16 12 N -0.73 1.04 5.07 -55.00 -0.28 0.76 16 13 C 0.14 -0.19 2.45 -67.94 -0.17 -0.36 16 14 H 0.09 0.05 7.58 -51.93 -0.39 -0.34 16 15 C -0.13 0.42 5.39 -26.73 -0.14 0.27 16 16 C -0.11 0.36 5.20 -26.73 -0.14 0.23 16 17 C -0.12 0.27 2.51 -90.63 -0.23 0.04 16 18 H 0.08 -0.16 8.14 -51.93 -0.42 -0.58 16 19 C 0.06 -0.10 6.96 37.15 0.26 0.16 16 20 F -0.22 -0.45 16.84 2.25 0.04 -0.41 16 21 C -0.11 0.11 5.08 -26.70 -0.14 -0.03 16 22 C -0.13 0.09 5.50 -26.70 -0.15 -0.05 16 23 N -0.58 0.49 6.07 -7.36 -0.04 0.45 16 24 C 0.12 0.09 7.25 -83.97 -0.61 -0.52 16 25 C -0.10 -0.03 9.61 -39.42 -0.38 -0.41 16 26 H 0.38 -1.52 8.70 45.56 0.40 -1.12 16 27 H 0.11 -0.04 7.96 -51.93 -0.41 -0.45 16 28 H -0.26 -0.50 7.11 56.52 0.40 -0.10 16 29 H -0.26 -0.25 7.11 56.52 0.40 0.15 16 30 H 0.13 -0.30 4.82 -52.49 -0.25 -0.56 16 31 H 0.13 -0.24 8.06 -52.48 -0.42 -0.66 16 32 H 0.16 0.19 8.06 -52.49 -0.42 -0.23 16 33 H 0.40 -1.62 7.66 -40.82 -0.31 -1.94 16 34 H 0.07 -0.28 8.14 -51.93 -0.42 -0.70 16 35 H 0.07 -0.25 8.14 -51.93 -0.42 -0.68 16 36 H 0.07 -0.23 8.14 -51.93 -0.42 -0.66 16 37 H 0.07 -0.30 8.14 -51.93 -0.42 -0.72 16 38 H 0.08 -0.19 8.14 -51.93 -0.42 -0.61 16 39 H 0.07 -0.22 8.14 -51.93 -0.42 -0.64 16 40 H 0.07 0.00 7.80 -51.93 -0.41 -0.40 16 41 H 0.07 -0.05 8.14 -51.93 -0.42 -0.48 16 42 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.07 0.09 8.14 -51.93 -0.42 -0.33 16 44 H 0.42 -1.63 8.12 -40.82 -0.33 -1.96 16 45 H 0.13 -0.08 8.06 -52.49 -0.42 -0.50 16 LS Contribution 367.68 15.07 5.54 5.54 Total: 0.00 -8.24 367.68 -11.21 -19.45 By element: Atomic # 1 Polarization: -7.62 SS G_CDS: -6.41 Total: -14.02 kcal Atomic # 6 Polarization: 1.81 SS G_CDS: -4.64 Total: -2.83 kcal Atomic # 7 Polarization: 1.53 SS G_CDS: -0.32 Total: 1.21 kcal Atomic # 8 Polarization: -2.58 SS G_CDS: -0.36 Total: -2.94 kcal Atomic # 9 Polarization: -0.45 SS G_CDS: 0.04 Total: -0.41 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.06 Total: -6.00 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -8.24 -11.21 -19.45 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_13158378.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -54.535 kcal (2) G-P(sol) polarization free energy of solvation -8.242 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -62.777 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.208 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.450 kcal (6) G-S(sol) free energy of system = (1) + (5) -73.986 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.80 seconds