Wall clock time and date at job start Tue Mar 9 2021 12:53:28 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86291 * 109.47430 * 2 1 4 4 C 1.50703 * 109.46964 * 120.00474 * 2 1 3 5 5 C 1.38575 * 120.32783 * 65.01855 * 4 2 1 6 6 C 1.38635 * 118.48771 * 179.70529 * 5 4 2 7 7 C 1.39265 * 119.05913 * 0.53545 * 6 5 4 8 8 C 1.48173 * 119.72304 * 179.73206 * 7 6 5 9 9 O 1.21515 * 119.99851 * 359.72272 * 8 7 6 10 10 N 1.34773 * 120.00051 * 179.72623 * 8 7 6 11 11 C 1.46500 * 119.99575 * 179.97438 * 10 8 7 12 12 H 1.08998 * 109.48027 * 325.00328 * 11 10 8 13 13 C 1.53006 * 109.47078 * 85.00554 * 11 10 8 14 14 C 1.52997 * 109.47269 * 179.97438 * 13 11 10 15 15 C 1.52992 * 109.47482 * 299.99806 * 14 13 11 16 16 H 1.08998 * 109.46862 * 300.00565 * 15 14 13 17 17 C 1.52997 * 109.47482 * 179.97438 * 15 14 13 18 18 F 1.39901 * 109.47234 * 180.02562 * 17 15 14 19 19 C 1.53006 * 109.47223 * 59.99712 * 15 14 13 20 20 C 1.52997 * 109.47127 * 300.00506 * 19 15 14 21 21 N 1.32747 * 120.55530 * 359.45296 * 7 6 5 22 22 C 1.31483 * 121.64202 * 0.27557 * 21 7 6 23 23 H 0.96702 * 114.00140 * 59.99790 * 1 2 3 24 24 H 1.09004 * 109.46851 * 239.99775 * 2 1 3 25 25 H 1.48499 * 109.99914 * 59.99977 * 3 2 1 26 26 H 1.48501 * 110.00177 * 181.31842 * 3 2 1 27 27 H 1.08001 * 120.75802 * 359.95589 * 5 4 2 28 28 H 1.08001 * 120.46969 * 180.27947 * 6 5 4 29 29 H 0.96993 * 120.00252 * 359.97438 * 10 8 7 30 30 H 1.09004 * 109.46785 * 299.99565 * 13 11 10 31 31 H 1.09001 * 109.47369 * 59.99066 * 13 11 10 32 32 H 1.09002 * 109.47153 * 179.97438 * 14 13 11 33 33 H 1.09001 * 109.46832 * 59.99780 * 14 13 11 34 34 H 1.09002 * 109.47153 * 59.99783 * 17 15 14 35 35 H 1.09001 * 109.46832 * 299.99974 * 17 15 14 36 36 H 1.09001 * 109.47002 * 60.00080 * 19 15 14 37 37 H 1.08993 * 109.46955 * 180.02562 * 19 15 14 38 38 H 1.09002 * 109.47153 * 179.97438 * 20 19 15 39 39 H 1.09001 * 109.47289 * 299.99953 * 20 19 15 40 40 H 1.08006 * 119.55287 * 180.02562 * 22 21 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7563 0.0000 4 6 1.9313 -0.7105 1.2304 5 6 1.6882 -2.0635 1.4054 6 6 2.1732 -2.6801 2.5485 7 6 2.8740 -1.9200 3.4815 8 6 3.3937 -2.5627 4.7113 9 8 3.2032 -3.7472 4.9048 10 7 4.0775 -1.8337 5.6153 11 6 4.5907 -2.4691 6.8315 12 1 3.8916 -3.2367 7.1633 13 6 5.9491 -3.1092 6.5381 14 6 6.4855 -3.7723 7.8083 15 6 6.6448 -2.7182 8.9057 16 1 7.3439 -1.9507 8.5735 17 6 7.1806 -3.3814 10.1761 18 9 7.3257 -2.4176 11.1797 19 6 5.2864 -2.0780 9.1991 20 6 4.7501 -1.4149 7.9289 21 7 3.0852 -0.6257 3.2757 22 6 2.6414 -0.0172 2.1980 23 1 -0.3933 0.4417 -0.7650 24 1 1.7923 -0.5139 -0.8900 25 1 1.5616 2.4678 1.2085 26 1 3.5346 1.7701 -0.0321 27 1 1.1372 -2.6258 0.6661 28 1 2.0062 -3.7340 2.7150 29 1 4.2298 -0.8883 5.4608 30 1 5.8357 -3.8600 5.7560 31 1 6.6484 -2.3417 6.2062 32 1 7.4530 -4.2286 7.5992 33 1 5.7863 -4.5397 8.1405 34 1 8.1482 -3.8377 9.9674 35 1 6.4811 -4.1486 10.5081 36 1 4.5873 -2.8455 9.5313 37 1 5.4001 -1.3268 9.9806 38 1 3.7822 -0.9593 8.1378 39 1 5.4492 -0.6475 7.5966 40 1 2.8329 1.0374 2.0647 There are 54 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 54 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16769142_13287726.mol2 40 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:28 Heat of formation + Delta-G solvation = -93.995138 kcal Electronic energy + Delta-G solvation = -23333.628497 eV Core-core repulsion = 19642.480244 eV Total energy + Delta-G solvation = -3691.148252 eV No. of doubly occupied orbitals = 54 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 295.137 amu Computer time = 0.50 seconds Orbital eigenvalues (eV) -48.50801 -41.90446 -40.67120 -39.15734 -37.92270 -35.62551 -34.02512 -33.07806 -31.94412 -31.62548 -28.07718 -26.43028 -25.08449 -23.87791 -23.79274 -22.44595 -21.56576 -21.09034 -19.22530 -18.69637 -18.23474 -17.29659 -16.95190 -16.79059 -16.69709 -16.45412 -16.24300 -16.16051 -15.49390 -15.32871 -15.22050 -14.86994 -14.52351 -14.47489 -14.32232 -14.06261 -13.97578 -13.51356 -13.26081 -13.18810 -12.57808 -12.47926 -12.22964 -12.18969 -11.96210 -11.63262 -11.46557 -11.29808 -11.26397 -11.09314 -10.76447 -10.54422 -10.29316 -10.02881 -5.15096 -0.59519 0.01956 1.06562 1.47421 1.62725 1.78188 1.98623 2.64309 2.88165 3.15566 3.41474 3.48599 3.50454 3.53811 3.66013 3.72045 3.84362 3.85884 3.95108 4.09527 4.14777 4.20565 4.22834 4.26633 4.34758 4.39576 4.42956 4.46522 4.68512 4.73649 4.78738 4.81690 4.92282 4.98413 5.02970 5.06804 5.09045 5.24863 5.30790 5.32476 5.47430 6.30767 6.41239 6.60517 7.13688 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.544 6.544 2 C -0.072 4.072 3 Si 0.685 3.315 4 C -0.104 4.104 5 C -0.050 4.050 6 C -0.106 4.106 7 C 0.079 3.921 8 C 0.574 3.426 9 O -0.528 6.528 10 N -0.708 5.708 11 C 0.143 3.857 12 H 0.092 0.908 13 C -0.128 4.128 14 C -0.110 4.110 15 C -0.123 4.123 16 H 0.084 0.916 17 C 0.064 3.936 18 F -0.218 7.218 19 C -0.112 4.112 20 C -0.126 4.126 21 N -0.452 5.452 22 C 0.099 3.901 23 H 0.387 0.613 24 H 0.082 0.918 25 H -0.246 1.246 26 H -0.250 1.250 27 H 0.150 0.850 28 H 0.155 0.845 29 H 0.411 0.589 30 H 0.071 0.929 31 H 0.067 0.933 32 H 0.071 0.929 33 H 0.070 0.930 34 H 0.075 0.925 35 H 0.075 0.925 36 H 0.069 0.931 37 H 0.076 0.924 38 H 0.073 0.927 39 H 0.071 0.929 40 H 0.156 0.844 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.339 2.385 -5.368 5.884 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.351 6.351 2 C -0.183 4.183 3 Si 0.585 3.415 4 C -0.107 4.107 5 C -0.076 4.076 6 C -0.127 4.127 7 C -0.059 4.059 8 C 0.359 3.641 9 O -0.403 6.403 10 N -0.358 5.358 11 C 0.039 3.961 12 H 0.110 0.890 13 C -0.167 4.167 14 C -0.148 4.148 15 C -0.142 4.142 16 H 0.102 0.898 17 C 0.009 3.991 18 F -0.199 7.199 19 C -0.150 4.150 20 C -0.164 4.164 21 N -0.163 5.163 22 C -0.061 4.061 23 H 0.235 0.765 24 H 0.100 0.900 25 H -0.170 1.170 26 H -0.174 1.174 27 H 0.167 0.833 28 H 0.173 0.827 29 H 0.247 0.753 30 H 0.090 0.910 31 H 0.085 0.915 32 H 0.090 0.910 33 H 0.089 0.911 34 H 0.093 0.907 35 H 0.093 0.907 36 H 0.088 0.912 37 H 0.094 0.906 38 H 0.092 0.908 39 H 0.090 0.910 40 H 0.172 0.828 Dipole moment (debyes) X Y Z Total from point charges 0.587 2.277 -3.535 4.246 hybrid contribution -0.350 -0.456 -0.654 0.870 sum 0.237 1.822 -4.189 4.574 Atomic orbital electron populations 1.86487 1.16662 1.81943 1.49999 1.24635 0.86203 1.10809 0.96678 0.94919 0.81057 0.77705 0.87791 1.20643 0.98563 0.95159 0.96298 1.21552 0.95502 0.93644 0.96923 1.22239 0.95172 1.02364 0.92915 1.21201 0.98682 0.90145 0.95911 1.17818 0.78027 0.85979 0.82283 1.90811 1.58208 1.14689 1.76632 1.45921 1.55085 1.13936 1.20871 1.21115 0.95676 0.95768 0.83589 0.89018 1.21900 0.96143 1.00562 0.98065 1.21453 1.01877 0.97456 0.94032 1.21837 0.98354 0.98983 0.94993 0.89797 1.22063 1.02464 0.89226 0.85340 1.92771 1.97351 1.66621 1.63127 1.21517 0.95681 1.00603 0.97186 1.21795 1.02202 0.97756 0.94606 1.67494 1.18249 1.09659 1.20918 1.22449 0.95158 0.99412 0.89068 0.76493 0.90036 1.17000 1.17443 0.83265 0.82745 0.75299 0.90985 0.91469 0.91029 0.91098 0.90657 0.90654 0.91243 0.90552 0.90838 0.91046 0.82758 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 12. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.77 12.82 -35.23 -0.45 0.32 16 2 C -0.07 0.13 2.81 36.01 0.10 0.23 16 3 Si 0.68 -1.82 29.87 -169.99 -5.08 -6.90 16 4 C -0.10 -0.11 5.40 -104.36 -0.56 -0.67 16 5 C -0.05 -0.04 9.83 -39.31 -0.39 -0.43 16 6 C -0.11 -0.21 9.63 -39.05 -0.38 -0.59 16 7 C 0.08 0.25 6.75 -83.01 -0.56 -0.31 16 8 C 0.57 2.16 7.78 -12.18 -0.09 2.07 16 9 O -0.53 -3.29 15.99 5.35 0.09 -3.21 16 10 N -0.71 -1.04 5.07 -54.64 -0.28 -1.32 16 11 C 0.14 0.08 2.46 -67.92 -0.17 -0.09 16 12 H 0.09 0.18 7.58 -51.93 -0.39 -0.21 16 13 C -0.13 -0.01 5.49 -26.73 -0.15 -0.16 16 14 C -0.11 0.13 5.20 -26.74 -0.14 0.00 16 15 C -0.12 0.14 2.52 -90.62 -0.23 -0.09 16 16 H 0.08 -0.07 8.14 -51.93 -0.42 -0.49 16 17 C 0.06 -0.05 6.96 37.16 0.26 0.21 16 18 F -0.22 -0.54 16.84 2.25 0.04 -0.50 16 19 C -0.11 0.09 5.08 -26.73 -0.14 -0.04 16 20 C -0.13 0.11 5.39 -26.73 -0.14 -0.03 16 21 N -0.45 -1.35 9.54 -9.80 -0.09 -1.44 16 22 C 0.10 0.20 9.84 -17.56 -0.17 0.03 16 23 H 0.39 -2.48 8.74 45.56 0.40 -2.08 16 24 H 0.08 -0.30 7.96 -51.93 -0.41 -0.71 16 25 H -0.25 -0.10 7.05 56.52 0.40 0.30 16 26 H -0.25 0.06 7.11 56.52 0.40 0.46 16 27 H 0.15 -0.20 8.06 -52.49 -0.42 -0.62 16 28 H 0.15 0.18 7.64 -52.49 -0.40 -0.22 16 29 H 0.41 0.16 7.93 -40.82 -0.32 -0.17 16 30 H 0.07 0.13 8.14 -51.93 -0.42 -0.30 16 31 H 0.07 -0.01 8.14 -51.93 -0.42 -0.44 16 32 H 0.07 -0.13 8.14 -51.93 -0.42 -0.55 16 33 H 0.07 -0.08 8.14 -51.93 -0.42 -0.50 16 34 H 0.08 -0.15 8.14 -51.93 -0.42 -0.57 16 35 H 0.08 -0.14 8.14 -51.93 -0.42 -0.56 16 36 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 37 H 0.08 -0.02 7.80 -51.93 -0.41 -0.42 16 38 H 0.07 -0.06 8.14 -51.93 -0.42 -0.48 16 39 H 0.07 -0.09 8.14 -51.93 -0.42 -0.52 16 40 H 0.16 0.13 4.88 -52.48 -0.26 -0.13 16 LS Contribution 331.43 15.07 4.99 4.99 Total: 0.00 -7.43 331.43 -9.18 -16.62 By element: Atomic # 1 Polarization: -3.04 SS G_CDS: -5.65 Total: -8.69 kcal Atomic # 6 Polarization: 2.88 SS G_CDS: -2.75 Total: 0.12 kcal Atomic # 7 Polarization: -2.39 SS G_CDS: -0.37 Total: -2.76 kcal Atomic # 8 Polarization: -2.52 SS G_CDS: -0.37 Total: -2.89 kcal Atomic # 9 Polarization: -0.54 SS G_CDS: 0.04 Total: -0.50 kcal Atomic # 14 Polarization: -1.82 SS G_CDS: -5.08 Total: -6.90 kcal Total LS contribution 4.99 Total: 4.99 kcal Total: -7.43 -9.18 -16.62 kcal The number of atoms in the molecule is 40 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_13287726.mol2 40 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -77.378 kcal (2) G-P(sol) polarization free energy of solvation -7.435 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -84.812 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.183 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.617 kcal (6) G-S(sol) free energy of system = (1) + (5) -93.995 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.50 seconds