Wall clock time and date at job start Tue Mar 9 2021 12:55:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42904 * 1 3 3 Si 1.86303 * 109.46684 * 2 1 4 4 C 1.50701 * 109.46828 * 240.00386 * 2 1 3 5 5 C 1.35449 * 125.56424 * 119.97675 * 4 2 1 6 6 C 1.39827 * 107.86598 * 180.02562 * 5 4 2 7 7 C 1.37872 * 107.08831 * 359.97438 * 6 5 4 8 8 C 1.46676 * 126.23609 * 179.97438 * 7 6 5 9 9 O 1.21684 * 120.00143 * 0.02562 * 8 7 6 10 10 N 1.34784 * 119.99783 * 180.02562 * 8 7 6 11 11 C 1.46496 * 119.99741 * 180.02562 * 10 8 7 12 12 H 1.08998 * 109.46884 * 324.99299 * 11 10 8 13 13 C 1.52999 * 109.47276 * 84.99845 * 11 10 8 14 14 C 1.53006 * 109.46811 * 179.97438 * 13 11 10 15 15 C 1.52997 * 109.47021 * 299.99780 * 14 13 11 16 16 H 1.08992 * 109.47518 * 300.00087 * 15 14 13 17 17 C 1.53006 * 109.47021 * 180.02562 * 15 14 13 18 18 F 1.39900 * 109.46764 * 65.00055 * 17 15 14 19 19 C 1.52999 * 109.47148 * 60.00427 * 15 14 13 20 20 C 1.52996 * 109.47179 * 299.99730 * 19 15 14 21 21 N 1.35528 * 125.56200 * 300.27782 * 4 2 1 22 22 H 0.96708 * 113.99882 * 299.99834 * 1 2 3 23 23 H 1.08994 * 109.47396 * 120.00029 * 2 1 3 24 24 H 1.48504 * 109.99794 * 178.68397 * 3 2 1 25 25 H 1.48497 * 110.00216 * 299.99684 * 3 2 1 26 26 H 1.08011 * 126.06895 * 0.04576 * 5 4 2 27 27 H 1.08001 * 126.46062 * 179.97438 * 6 5 4 28 28 H 0.96998 * 119.99578 * 359.97438 * 10 8 7 29 29 H 1.08997 * 109.46828 * 299.99763 * 13 11 10 30 30 H 1.09000 * 109.47001 * 60.00331 * 13 11 10 31 31 H 1.09004 * 109.46568 * 179.97438 * 14 13 11 32 32 H 1.08992 * 109.47046 * 60.00157 * 14 13 11 33 33 H 1.08993 * 109.46955 * 185.00420 * 17 15 14 34 34 H 1.09000 * 109.47050 * 305.00249 * 17 15 14 35 35 H 1.09009 * 109.47170 * 59.99770 * 19 15 14 36 36 H 1.09001 * 109.47273 * 179.97438 * 19 15 14 37 37 H 1.08998 * 109.47611 * 180.02562 * 20 19 15 38 38 H 1.09001 * 109.47244 * 300.00397 * 20 19 15 39 39 H 0.97003 * 125.68328 * 0.02562 * 21 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 2.7129 -0.1633 -2.1921 6 6 2.9561 -1.1454 -3.1573 7 6 2.3020 -2.2875 -2.7470 8 6 2.2780 -3.5736 -3.4518 9 8 2.8758 -3.7020 -4.5039 10 7 1.5939 -4.6132 -2.9341 11 6 1.5705 -5.8978 -3.6379 12 1 1.5687 -5.7227 -4.7137 13 6 2.8085 -6.7115 -3.2555 14 6 2.7836 -8.0535 -3.9901 15 6 1.5235 -8.8269 -3.5966 16 1 1.5254 -9.0016 -2.5208 17 6 1.4989 -10.1691 -4.3307 18 9 2.5687 -10.9584 -3.8952 19 6 0.2855 -8.0132 -3.9790 20 6 0.3103 -6.6713 -3.2445 21 7 1.6699 -1.9991 -1.5586 22 1 -0.3933 0.4417 0.7651 23 1 1.7924 -0.5138 0.8899 24 1 3.5345 1.7704 0.0321 25 1 1.5614 2.4679 -1.2085 26 1 3.0829 0.8512 -2.2099 27 1 3.5454 -1.0308 -4.0551 28 1 1.1178 -4.5108 -2.0953 29 1 3.7062 -6.1603 -3.5354 30 1 2.8101 -6.8866 -2.1796 31 1 3.6658 -8.6329 -3.7180 32 1 2.7817 -7.8788 -5.0659 33 1 0.5601 -10.6812 -4.1201 34 1 1.5867 -9.9981 -5.4036 35 1 0.2835 -7.8385 -5.0550 36 1 -0.6123 -8.5644 -3.6991 37 1 -0.5719 -6.0917 -3.5166 38 1 0.3123 -6.8459 -2.1686 39 1 1.1290 -2.6161 -1.0412 There are 52 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 52 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16769142_6580494.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:33 Heat of formation + Delta-G solvation = -91.299908 kcal Electronic energy + Delta-G solvation = -22198.322634 eV Core-core repulsion = 18635.517396 eV Total energy + Delta-G solvation = -3562.805238 eV No. of doubly occupied orbitals = 52 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 283.137 amu Computer time = 0.59 seconds Orbital eigenvalues (eV) -48.58487 -42.67337 -40.90273 -39.20747 -37.63967 -35.78394 -32.72637 -32.02412 -31.85824 -31.15250 -27.40257 -26.08552 -23.96250 -23.40044 -22.26986 -21.62227 -21.47459 -20.94613 -19.61938 -18.45502 -17.52930 -17.16409 -16.85751 -16.65431 -16.48017 -16.41915 -15.81229 -15.43620 -15.25215 -15.17413 -14.98743 -14.60432 -14.48607 -14.34489 -13.89972 -13.56189 -13.52420 -13.25630 -13.23976 -12.73537 -12.59020 -12.20215 -12.05305 -11.80785 -11.66995 -11.53920 -11.36858 -11.14380 -10.48760 -10.32404 -10.26499 -9.40509 -4.93716 0.15550 1.18139 1.35582 1.74730 1.83192 2.00994 2.10002 2.13591 3.28297 3.44416 3.50744 3.60845 3.71518 3.80300 3.85853 3.98261 4.01186 4.15562 4.20157 4.22438 4.28836 4.35524 4.39487 4.42338 4.47409 4.69582 4.76445 4.79222 4.81260 4.84824 4.98949 5.01911 5.08738 5.12389 5.23954 5.29985 5.39092 5.43833 5.57821 6.16924 6.36047 6.84201 6.94175 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.565 6.565 2 C -0.062 4.062 3 Si 0.812 3.188 4 C 0.070 3.930 5 C -0.232 4.232 6 C -0.120 4.120 7 C -0.061 4.061 8 C 0.591 3.409 9 O -0.568 6.568 10 N -0.711 5.711 11 C 0.145 3.855 12 H 0.071 0.929 13 C -0.123 4.123 14 C -0.112 4.112 15 C -0.116 4.116 16 H 0.086 0.914 17 C 0.056 3.944 18 F -0.239 7.239 19 C -0.106 4.106 20 C -0.118 4.118 21 N -0.505 5.505 22 H 0.411 0.589 23 H 0.108 0.892 24 H -0.290 1.290 25 H -0.301 1.301 26 H 0.143 0.857 27 H 0.146 0.854 28 H 0.410 0.590 29 H 0.044 0.956 30 H 0.074 0.926 31 H 0.061 0.939 32 H 0.063 0.937 33 H 0.095 0.905 34 H 0.083 0.917 35 H 0.070 0.930 36 H 0.092 0.908 37 H 0.081 0.919 38 H 0.086 0.914 39 H 0.432 0.568 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.235 0.843 8.278 10.398 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.376 6.376 2 C -0.171 4.171 3 Si 0.716 3.284 4 C -0.050 4.050 5 C -0.256 4.256 6 C -0.146 4.146 7 C -0.174 4.174 8 C 0.379 3.621 9 O -0.447 6.447 10 N -0.362 5.362 11 C 0.042 3.958 12 H 0.089 0.911 13 C -0.161 4.161 14 C -0.150 4.150 15 C -0.134 4.134 16 H 0.104 0.896 17 C 0.001 3.999 18 F -0.220 7.220 19 C -0.144 4.144 20 C -0.156 4.156 21 N -0.102 5.102 22 H 0.263 0.737 23 H 0.126 0.874 24 H -0.218 1.218 25 H -0.229 1.229 26 H 0.161 0.839 27 H 0.163 0.837 28 H 0.246 0.754 29 H 0.063 0.937 30 H 0.093 0.907 31 H 0.080 0.920 32 H 0.082 0.918 33 H 0.113 0.887 34 H 0.101 0.899 35 H 0.089 0.911 36 H 0.111 0.889 37 H 0.099 0.901 38 H 0.104 0.896 39 H 0.273 0.727 Dipole moment (debyes) X Y Z Total from point charges -5.352 0.821 6.652 8.578 hybrid contribution 0.184 -0.652 -0.046 0.679 sum -5.168 0.170 6.606 8.389 Atomic orbital electron populations 1.86417 1.16580 1.82598 1.51989 1.24641 0.86336 1.11372 0.94737 0.94251 0.77019 0.73020 0.84083 1.20497 1.01230 0.84805 0.98446 1.20718 1.07716 1.00373 0.96756 1.21415 1.01335 0.91499 1.00373 1.20327 1.08687 0.96364 0.92069 1.17127 0.78577 0.82508 0.83869 1.90841 1.46072 1.83760 1.24062 1.45839 1.52420 1.11122 1.26810 1.21098 0.96318 0.81437 0.96992 0.91125 1.21833 0.97404 0.95717 1.01183 1.21514 0.98097 0.95009 1.00430 1.21774 0.95946 0.94145 1.01582 0.89562 1.22310 0.87542 0.89978 1.00045 1.92731 1.60516 1.76868 1.91934 1.21443 0.97338 0.94623 1.01031 1.21759 0.95720 0.95959 1.02131 1.41840 1.39064 1.11235 1.18094 0.73677 0.87418 1.21763 1.22911 0.83906 0.83658 0.75409 0.93746 0.90691 0.92023 0.91842 0.88680 0.89914 0.91116 0.88918 0.90061 0.89561 0.72720 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 3.13 12.86 -148.98 -1.92 1.22 16 2 C -0.06 0.30 3.07 71.24 0.22 0.52 16 3 Si 0.81 -3.93 30.54 68.60 2.10 -1.84 16 4 C 0.07 0.19 6.51 41.34 0.27 0.46 16 5 C -0.23 -1.63 9.32 22.01 0.21 -1.42 16 6 C -0.12 -1.15 10.65 22.57 0.24 -0.91 16 7 C -0.06 -0.42 7.06 40.35 0.28 -0.14 16 8 C 0.59 4.90 7.75 86.45 0.67 5.57 16 9 O -0.57 -9.59 16.54 -4.30 -0.07 -9.66 16 10 N -0.71 -0.04 5.07 -446.51 -2.27 -2.30 16 11 C 0.15 -0.01 2.46 44.99 0.11 0.10 16 12 H 0.07 0.35 7.58 -2.39 -0.02 0.33 16 13 C -0.12 -0.16 5.50 30.60 0.17 0.01 16 14 C -0.11 -0.03 5.12 30.60 0.16 0.12 16 15 C -0.12 0.44 2.49 -10.79 -0.03 0.41 16 16 H 0.09 -0.33 8.14 -2.39 -0.02 -0.35 16 17 C 0.06 -0.15 6.91 71.98 0.50 0.34 16 18 F -0.24 -1.25 17.04 44.97 0.77 -0.48 16 19 C -0.11 0.72 5.20 30.59 0.16 0.88 16 20 C -0.12 0.75 5.39 30.59 0.16 0.92 16 21 N -0.50 -0.40 5.99 -171.93 -1.03 -1.43 16 22 H 0.41 -6.63 8.74 -74.05 -0.65 -7.28 16 23 H 0.11 -1.12 7.96 -2.39 -0.02 -1.14 16 24 H -0.29 -0.43 7.11 99.48 0.71 0.28 16 25 H -0.30 -1.22 7.11 99.48 0.71 -0.52 16 26 H 0.14 0.83 6.17 -2.90 -0.02 0.81 16 27 H 0.15 1.44 8.06 -2.91 -0.02 1.42 16 28 H 0.41 -2.70 7.73 -92.71 -0.72 -3.42 16 29 H 0.04 0.31 8.14 -2.39 -0.02 0.29 16 30 H 0.07 -0.06 8.14 -2.39 -0.02 -0.08 16 31 H 0.06 0.16 7.94 -2.38 -0.02 0.15 16 32 H 0.06 0.08 8.14 -2.39 -0.02 0.06 16 33 H 0.10 -0.63 8.14 -2.39 -0.02 -0.65 16 34 H 0.08 -0.35 8.14 -2.39 -0.02 -0.37 16 35 H 0.07 -0.42 8.14 -2.38 -0.02 -0.44 16 36 H 0.09 -0.89 8.14 -2.39 -0.02 -0.91 16 37 H 0.08 -0.57 8.14 -2.39 -0.02 -0.59 16 38 H 0.09 -0.77 8.14 -2.39 -0.02 -0.79 16 39 H 0.43 -2.62 8.19 -92.71 -0.76 -3.38 16 Total: 0.00 -23.92 323.46 -0.30 -24.22 By element: Atomic # 1 Polarization: -15.58 SS G_CDS: -1.00 Total: -16.58 kcal Atomic # 6 Polarization: 3.74 SS G_CDS: 3.12 Total: 6.86 kcal Atomic # 7 Polarization: -0.44 SS G_CDS: -3.30 Total: -3.74 kcal Atomic # 8 Polarization: -6.45 SS G_CDS: -1.99 Total: -8.44 kcal Atomic # 9 Polarization: -1.25 SS G_CDS: 0.77 Total: -0.48 kcal Atomic # 14 Polarization: -3.93 SS G_CDS: 2.10 Total: -1.84 kcal Total: -23.92 -0.30 -24.22 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_6580494.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -67.080 kcal (2) G-P(sol) polarization free energy of solvation -23.916 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -90.996 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.304 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.220 kcal (6) G-S(sol) free energy of system = (1) + (5) -91.300 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds