Wall clock time and date at job start Tue Mar 9 2021 12:55:53 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42903 * 1 3 3 Si 1.86292 * 109.46888 * 2 1 4 4 C 1.50701 * 109.47137 * 239.99952 * 2 1 3 5 5 C 1.34235 * 126.49590 * 105.31525 * 4 2 1 6 6 N 1.36839 * 109.93744 * 180.16622 * 5 4 2 7 7 C 1.46499 * 125.06451 * 179.81274 * 6 5 4 8 8 C 1.50700 * 109.47257 * 264.69900 * 7 6 5 9 9 O 1.21283 * 119.99803 * 359.97438 * 8 7 6 10 10 N 1.34777 * 119.99675 * 180.27849 * 8 7 6 11 11 C 1.46497 * 119.99525 * 179.72583 * 10 8 7 12 12 H 1.09007 * 109.47747 * 35.00142 * 11 10 8 13 13 C 1.53006 * 109.47036 * 154.99621 * 11 10 8 14 14 C 1.52998 * 109.47344 * 179.97438 * 13 11 10 15 15 C 1.52999 * 109.46921 * 300.00334 * 14 13 11 16 16 H 1.08999 * 109.47539 * 299.99851 * 15 14 13 17 17 C 1.53007 * 109.47279 * 180.02562 * 15 14 13 18 18 F 1.39895 * 109.47348 * 180.02562 * 17 15 14 19 19 C 1.52999 * 109.47579 * 59.99872 * 15 14 13 20 20 C 1.52998 * 109.47099 * 300.00018 * 19 15 14 21 21 C 1.37693 * 109.87040 * 359.55342 * 6 5 4 22 22 C 1.39087 * 133.51106 * 180.24023 * 21 6 5 23 23 C 1.37794 * 119.77496 * 180.02562 * 22 21 6 24 24 C 1.38795 * 120.66767 * 0.02562 * 23 22 21 25 25 C 1.36652 * 120.52490 * 359.97438 * 24 23 22 26 26 C 1.39591 * 119.76923 * 0.02562 * 25 24 23 27 27 H 0.96698 * 114.00024 * 60.00377 * 1 2 3 28 28 H 1.08997 * 109.47029 * 120.00071 * 2 1 3 29 29 H 1.48510 * 110.00141 * 60.00133 * 3 2 1 30 30 H 1.48505 * 110.00135 * 181.31702 * 3 2 1 31 31 H 1.08002 * 125.03481 * 0.02562 * 5 4 2 32 32 H 1.09009 * 109.46700 * 144.69794 * 7 6 5 33 33 H 1.08998 * 109.46827 * 24.70369 * 7 6 5 34 34 H 0.97000 * 119.99894 * 359.71837 * 10 8 7 35 35 H 1.09001 * 109.47081 * 299.99960 * 13 11 10 36 36 H 1.09002 * 109.47134 * 59.99771 * 13 11 10 37 37 H 1.09002 * 109.47122 * 59.99850 * 14 13 11 38 38 H 1.08998 * 109.47333 * 180.02562 * 14 13 11 39 39 H 1.09008 * 109.46652 * 299.99967 * 17 15 14 40 40 H 1.08995 * 109.46926 * 59.99368 * 17 15 14 41 41 H 1.09002 * 109.47185 * 60.00042 * 19 15 14 42 42 H 1.09001 * 109.47276 * 180.02562 * 19 15 14 43 43 H 1.09002 * 109.47122 * 300.00063 * 20 19 15 44 44 H 1.08998 * 109.47333 * 179.97438 * 20 19 15 45 45 H 1.07991 * 120.11681 * 0.04424 * 22 21 6 46 46 H 1.08005 * 119.66405 * 179.97438 * 23 22 21 47 47 H 1.08000 * 119.73190 * 179.97438 * 24 23 22 48 48 H 1.08008 * 120.11806 * 180.02562 * 25 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 2.4662 -0.1379 -2.3205 6 7 2.8029 -1.0989 -3.2346 7 6 3.4077 -0.8402 -4.5436 8 6 2.3280 -0.7838 -5.5935 9 8 1.1676 -0.9444 -5.2792 10 7 2.6525 -0.5610 -6.8825 11 6 1.6035 -0.5121 -7.9039 12 1 0.7045 -0.0641 -7.4805 13 6 2.0835 0.3296 -9.0881 14 6 0.9882 0.3801 -10.1551 15 6 0.6751 -1.0395 -10.6321 16 1 1.5742 -1.4873 -11.0553 17 6 -0.4198 -0.9890 -11.6997 18 9 -0.7066 -2.2870 -12.1355 19 6 0.1951 -1.8812 -9.4481 20 6 1.2903 -1.9317 -8.3810 21 6 2.4940 -2.3456 -2.7384 22 6 2.6287 -3.6361 -3.2395 23 6 2.2145 -4.7106 -2.4828 24 6 1.6627 -4.5192 -1.2238 25 6 1.5211 -3.2600 -0.7122 26 6 1.9340 -2.1570 -1.4615 27 1 -0.3933 0.4416 -0.7651 28 1 1.7923 -0.5138 0.8900 29 1 1.5614 2.4679 1.2086 30 1 3.5346 1.7703 -0.0321 31 1 2.6076 0.9241 -2.4568 32 1 4.1077 -1.6403 -4.7849 33 1 3.9386 0.1113 -4.5169 34 1 3.5806 -0.4329 -7.1338 35 1 2.3070 1.3408 -8.7481 36 1 2.9825 -0.1184 -9.5116 37 1 0.0890 0.8278 -9.7319 38 1 1.3303 0.9794 -10.9989 39 1 -1.3191 -0.5410 -11.2769 40 1 -0.0774 -0.3894 -12.5431 41 1 -0.7042 -1.4335 -9.0249 42 1 -0.0276 -2.8927 -9.7879 43 1 2.1895 -2.3794 -8.8042 44 1 0.9482 -2.5310 -7.5372 45 1 3.0567 -3.7954 -4.2180 46 1 2.3196 -5.7119 -2.8739 47 1 1.3428 -5.3723 -0.6439 48 1 1.0912 -3.1186 0.2685 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16769142_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:55:53 Heat of formation + Delta-G solvation = -62.777722 kcal Electronic energy + Delta-G solvation = -30580.523142 eV Core-core repulsion = 26323.201060 eV Total energy + Delta-G solvation = -4257.322082 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 347.168 amu Computer time = 0.92 seconds Orbital eigenvalues (eV) -48.57593 -42.53817 -40.99567 -39.26404 -38.10432 -37.60209 -35.58735 -34.09695 -32.12726 -31.79586 -31.19221 -30.24658 -28.90606 -26.62389 -25.52806 -23.88703 -23.72554 -22.86869 -22.23038 -21.58204 -20.94360 -20.62471 -18.66227 -18.36915 -17.79473 -17.40891 -17.00909 -16.91403 -16.66216 -16.49161 -16.39550 -16.19052 -15.97890 -15.49145 -15.39176 -15.09859 -14.93756 -14.81054 -14.69579 -14.46896 -14.28979 -14.06137 -13.70088 -13.49039 -13.23533 -13.17515 -13.09091 -12.73718 -12.59086 -12.52758 -12.24021 -12.14910 -12.12378 -11.82237 -11.75260 -11.55366 -11.43379 -11.24676 -11.00283 -10.55597 -10.30580 -10.10687 -9.17347 -8.63684 -4.99684 0.12392 0.61399 1.36820 1.41109 1.50493 1.68966 1.70957 2.00317 2.23542 2.92356 3.47679 3.56442 3.58583 3.65071 3.68467 3.71155 3.77292 3.88148 3.92115 4.03209 4.05236 4.16221 4.19625 4.23055 4.28549 4.30777 4.34711 4.40360 4.46887 4.48334 4.52150 4.54418 4.70130 4.75908 4.77069 4.84486 4.86482 4.88957 5.05246 5.08748 5.11302 5.13980 5.18608 5.32852 5.40099 5.48197 5.50308 5.63656 5.71421 5.73866 6.19276 6.23264 6.52181 6.81729 7.19108 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.564 6.564 2 C -0.048 4.048 3 Si 0.796 3.204 4 C -0.226 4.226 5 C 0.080 3.920 6 N -0.466 5.466 7 C 0.087 3.913 8 C 0.492 3.508 9 O -0.569 6.569 10 N -0.709 5.709 11 C 0.149 3.851 12 H 0.065 0.935 13 C -0.116 4.116 14 C -0.108 4.108 15 C -0.115 4.115 16 H 0.086 0.914 17 C 0.054 3.946 18 F -0.240 7.240 19 C -0.114 4.114 20 C -0.121 4.121 21 C 0.091 3.909 22 C -0.133 4.133 23 C -0.109 4.109 24 C -0.154 4.154 25 C -0.091 4.091 26 C -0.118 4.118 27 H 0.390 0.610 28 H 0.091 0.909 29 H -0.301 1.301 30 H -0.274 1.274 31 H 0.210 0.790 32 H 0.139 0.861 33 H 0.167 0.833 34 H 0.420 0.580 35 H 0.086 0.914 36 H 0.086 0.914 37 H 0.068 0.932 38 H 0.091 0.909 39 H 0.081 0.919 40 H 0.095 0.905 41 H 0.058 0.942 42 H 0.056 0.944 43 H 0.075 0.925 44 H 0.039 0.961 45 H 0.132 0.868 46 H 0.144 0.856 47 H 0.135 0.865 48 H 0.116 0.884 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 6.767 6.151 -7.335 11.723 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.372 6.372 2 C -0.157 4.157 3 Si 0.700 3.300 4 C -0.233 4.233 5 C -0.045 4.045 6 N -0.149 5.149 7 C -0.038 4.038 8 C 0.277 3.723 9 O -0.447 6.447 10 N -0.362 5.362 11 C 0.044 3.956 12 H 0.083 0.917 13 C -0.154 4.154 14 C -0.146 4.146 15 C -0.134 4.134 16 H 0.104 0.896 17 C 0.000 4.000 18 F -0.221 7.221 19 C -0.152 4.152 20 C -0.160 4.160 21 C -0.015 4.015 22 C -0.154 4.154 23 C -0.128 4.128 24 C -0.173 4.173 25 C -0.110 4.110 26 C -0.123 4.123 27 H 0.240 0.760 28 H 0.109 0.891 29 H -0.229 1.229 30 H -0.200 1.200 31 H 0.226 0.774 32 H 0.157 0.843 33 H 0.184 0.816 34 H 0.258 0.742 35 H 0.104 0.896 36 H 0.104 0.896 37 H 0.086 0.914 38 H 0.109 0.891 39 H 0.099 0.901 40 H 0.113 0.887 41 H 0.077 0.923 42 H 0.075 0.925 43 H 0.094 0.906 44 H 0.058 0.942 45 H 0.150 0.850 46 H 0.162 0.838 47 H 0.153 0.847 48 H 0.134 0.866 Dipole moment (debyes) X Y Z Total from point charges 6.649 6.367 -6.465 11.249 hybrid contribution -0.099 -1.270 0.370 1.326 sum 6.550 5.098 -6.095 10.298 Atomic orbital electron populations 1.86441 1.18337 1.82441 1.49969 1.24720 0.84374 1.11122 0.95468 0.93974 0.77462 0.73444 0.85132 1.20799 1.11495 0.91822 0.99168 1.22092 0.99028 0.95304 0.88065 1.43451 1.53291 1.03752 1.14365 1.21999 0.93862 1.09110 0.78781 1.21398 0.90398 0.76011 0.84452 1.90807 1.22272 1.49816 1.81813 1.45903 1.11898 1.72504 1.05884 1.20943 0.91013 0.95495 0.88158 0.91711 1.21741 0.99364 1.00551 0.93739 1.21452 0.99321 0.94673 0.99154 1.21772 0.98824 0.97871 0.94931 0.89554 1.22333 0.99992 0.79054 0.98661 1.92727 1.95237 1.42602 1.91565 1.21497 0.98227 1.00199 0.95251 1.21809 0.99370 0.97063 0.97736 1.18379 1.01785 0.87100 0.94195 1.20238 1.04982 0.89219 1.00933 1.21122 0.98349 0.99047 0.94316 1.20904 1.02374 0.97003 0.97034 1.20445 0.99187 0.91854 0.99511 1.19388 1.03752 0.94017 0.95097 0.76046 0.89132 1.22921 1.19978 0.77366 0.84290 0.81598 0.74238 0.89569 0.89572 0.91370 0.89094 0.90050 0.88713 0.92334 0.92509 0.90635 0.94227 0.85032 0.83776 0.84689 0.86612 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.81 12.88 -148.98 -1.92 -5.73 16 2 C -0.05 -0.22 3.06 71.24 0.22 0.00 16 3 Si 0.80 -1.09 30.75 68.60 2.11 1.02 16 4 C -0.23 -1.36 5.58 -18.63 -0.10 -1.46 16 5 C 0.08 0.03 9.89 83.00 0.82 0.85 16 6 N -0.47 -0.67 2.27 -519.98 -1.18 -1.85 16 7 C 0.09 -0.67 6.48 85.63 0.56 -0.12 16 8 C 0.49 -0.97 7.86 87.66 0.69 -0.28 16 9 O -0.57 -5.58 16.08 -3.04 -0.05 -5.63 16 10 N -0.71 5.64 5.08 -442.52 -2.25 3.40 16 11 C 0.15 -0.70 2.45 44.99 0.11 -0.59 16 12 H 0.06 0.07 7.58 -2.38 -0.02 0.05 16 13 C -0.12 1.18 5.39 30.60 0.16 1.35 16 14 C -0.11 0.97 5.20 30.59 0.16 1.13 16 15 C -0.12 0.60 2.51 -10.79 -0.03 0.57 16 16 H 0.09 -0.47 8.14 -2.39 -0.02 -0.49 16 17 C 0.05 -0.19 6.96 71.98 0.50 0.31 16 18 F -0.24 -1.12 16.84 44.97 0.76 -0.37 16 19 C -0.11 0.10 5.08 30.59 0.16 0.26 16 20 C -0.12 0.18 5.49 30.59 0.17 0.35 16 21 C 0.09 0.71 6.80 39.03 0.27 0.98 16 22 C -0.13 -0.83 10.00 22.37 0.22 -0.61 16 23 C -0.11 -0.67 10.01 22.30 0.22 -0.45 16 24 C -0.15 -1.24 9.97 22.03 0.22 -1.02 16 25 C -0.09 -1.01 10.05 22.23 0.22 -0.79 16 26 C -0.12 -1.29 6.35 -20.20 -0.13 -1.42 16 27 H 0.39 -0.29 8.70 -74.06 -0.64 -0.93 16 28 H 0.09 0.64 7.96 -2.39 -0.02 0.63 16 29 H -0.30 -1.91 7.11 99.48 0.71 -1.21 16 30 H -0.27 -0.44 7.11 99.48 0.71 0.26 16 31 H 0.21 -1.84 6.34 -2.91 -0.02 -1.86 16 32 H 0.14 -1.67 8.14 -2.38 -0.02 -1.69 16 33 H 0.17 -2.74 8.12 -2.39 -0.02 -2.76 16 34 H 0.42 -6.47 8.60 -92.71 -0.80 -7.27 16 35 H 0.09 -1.01 8.14 -2.39 -0.02 -1.03 16 36 H 0.09 -1.08 8.14 -2.39 -0.02 -1.10 16 37 H 0.07 -0.53 8.14 -2.39 -0.02 -0.55 16 38 H 0.09 -1.05 8.14 -2.39 -0.02 -1.07 16 39 H 0.08 -0.41 8.14 -2.38 -0.02 -0.43 16 40 H 0.09 -0.70 8.14 -2.39 -0.02 -0.72 16 41 H 0.06 0.05 8.14 -2.39 -0.02 0.03 16 42 H 0.06 0.13 7.80 -2.39 -0.02 0.11 16 43 H 0.07 -0.28 8.14 -2.39 -0.02 -0.30 16 44 H 0.04 0.19 8.14 -2.39 -0.02 0.17 16 45 H 0.13 0.19 8.06 -2.92 -0.02 0.17 16 46 H 0.14 0.15 8.06 -2.91 -0.02 0.13 16 47 H 0.14 0.54 8.06 -2.91 -0.02 0.51 16 48 H 0.12 1.20 8.06 -2.91 -0.02 1.18 16 Total: 0.00 -29.77 394.16 1.48 -28.29 By element: Atomic # 1 Polarization: -17.76 SS G_CDS: -0.43 Total: -18.19 kcal Atomic # 6 Polarization: -5.37 SS G_CDS: 4.44 Total: -0.93 kcal Atomic # 7 Polarization: 4.97 SS G_CDS: -3.43 Total: 1.54 kcal Atomic # 8 Polarization: -9.40 SS G_CDS: -1.97 Total: -11.37 kcal Atomic # 9 Polarization: -1.12 SS G_CDS: 0.76 Total: -0.37 kcal Atomic # 14 Polarization: -1.09 SS G_CDS: 2.11 Total: 1.02 kcal Total: -29.77 1.48 -28.29 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16769142_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -34.489 kcal (2) G-P(sol) polarization free energy of solvation -29.771 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -64.260 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.482 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.289 kcal (6) G-S(sol) free energy of system = (1) + (5) -62.778 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.92 seconds