Wall clock time and date at job start Tue Mar 9 2021 14:37:26 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42905 * 1 3 3 C 1.42896 * 113.99934 * 2 1 4 4 C 1.53002 * 112.85291 * 294.03138 * 3 2 1 5 5 F 1.39897 * 109.47266 * 196.37266 * 4 3 2 6 6 F 1.39908 * 109.46669 * 316.36666 * 4 3 2 7 7 F 1.39891 * 109.47284 * 76.36948 * 4 3 2 8 8 C 1.53778 * 113.61614 * 162.72047 * 3 2 1 9 9 C 1.53786 * 87.08246 * 270.88499 * 8 3 2 10 10 H 1.08995 * 113.68842 * 89.12446 * 9 8 3 11 11 N 1.46500 * 113.61429 * 220.01702 * 9 8 3 12 12 C 1.34776 * 119.99946 * 252.49788 * 11 9 8 13 13 O 1.21725 * 120.00216 * 359.97438 * 12 11 9 14 14 C 1.46570 * 119.99979 * 180.02562 * 12 11 9 15 15 C 1.40853 * 126.57630 * 180.02562 * 14 12 11 16 16 C 1.40094 * 132.86951 * 0.37282 * 15 14 12 17 17 C 1.36441 * 119.25279 * 180.18493 * 16 15 14 18 18 C 1.50705 * 120.29510 * 179.74116 * 17 16 15 19 19 O 1.42896 * 109.47519 * 119.72386 * 18 17 16 20 20 Si 1.86305 * 109.46969 * 239.72308 * 18 17 16 21 21 C 1.40158 * 119.41191 * 359.46371 * 17 16 15 22 22 C 1.35193 * 120.31973 * 0.25712 * 21 17 16 23 23 N 1.36239 * 120.69879 * 0.02562 * 22 21 17 24 24 N 1.40021 * 132.00709 * 180.02562 * 23 22 21 25 25 C 1.30738 * 109.60508 * 180.02562 * 24 23 22 26 26 C 1.53777 * 87.07872 * 334.56449 * 9 8 3 27 27 H 1.08994 * 109.47003 * 183.58139 * 1 2 3 28 28 H 1.08999 * 109.46906 * 303.57799 * 1 2 3 29 29 H 1.08991 * 109.47120 * 63.57749 * 1 2 3 30 30 H 1.08997 * 113.61771 * 156.34027 * 8 3 2 31 31 H 1.09004 * 113.61346 * 25.43556 * 8 3 2 32 32 H 0.97001 * 120.00042 * 72.49735 * 11 9 8 33 33 H 1.08002 * 120.37121 * 359.92335 * 16 15 14 34 34 H 1.08993 * 109.47228 * 359.71929 * 18 17 16 35 35 H 0.96700 * 114.00766 * 179.97438 * 19 18 17 36 36 H 1.48501 * 109.99795 * 178.67910 * 20 18 17 37 37 H 1.48498 * 110.00041 * 299.99983 * 20 18 17 38 38 H 1.07999 * 119.84295 * 180.27631 * 21 17 16 39 39 H 1.07990 * 119.64893 * 180.02562 * 22 21 17 40 40 H 1.08002 * 125.63108 * 180.02562 * 25 24 23 41 41 H 1.09009 * 113.61144 * 139.97793 * 26 9 8 42 42 H 1.09001 * 113.61821 * 270.88355 * 26 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.7274 2.0818 -1.2877 5 9 2.6085 3.1642 -1.3828 6 9 1.9049 1.2379 -2.3895 7 9 0.4103 2.5529 -1.2685 8 6 3.4899 1.3210 0.4185 9 6 2.9973 1.4822 1.8664 10 1 2.8236 0.5355 2.3778 11 7 3.7994 2.4179 2.6584 12 6 4.6234 1.9538 3.6187 13 8 4.7007 0.7572 3.8283 14 6 5.4254 2.8900 4.4115 15 6 6.3262 2.5592 5.4426 16 6 6.7283 1.3393 6.0019 17 6 7.6384 1.3397 7.0185 18 6 8.0831 0.0414 7.6413 19 8 9.4944 -0.1083 7.4745 20 14 7.6700 0.0506 9.4579 21 6 8.1605 2.5579 7.4744 22 6 7.7624 3.7228 6.9158 23 7 6.8498 3.7331 5.9042 24 7 6.2799 4.7781 5.1669 25 6 5.4422 4.2901 4.2897 26 6 1.7214 2.1084 1.2794 27 1 -0.3633 -1.0256 0.0642 28 1 -0.3633 0.5684 0.8562 29 1 -0.3633 0.4573 -0.9202 30 1 4.0400 2.1850 0.0458 31 1 4.0055 0.3783 0.2351 32 1 3.7375 3.3715 2.4917 33 1 6.3193 0.4093 5.6355 34 1 7.5698 -0.7888 7.1562 35 1 9.8509 -0.9238 7.8526 36 1 8.0746 -1.2370 10.0773 37 1 8.3637 1.1780 10.1308 38 1 8.8847 2.5660 8.2756 39 1 8.1720 4.6551 7.2752 40 1 4.8604 4.8674 3.5864 41 1 0.8091 1.8013 1.7909 42 1 1.7880 3.1877 1.1419 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16772210_11618758.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:37:26 Heat of formation + Delta-G solvation = -112.412160 kcal Electronic energy + Delta-G solvation = -33972.041846 eV Core-core repulsion = 28700.626636 eV Total energy + Delta-G solvation = -5271.415209 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.113 amu Computer time = 0.93 seconds Orbital eigenvalues (eV) -51.16891 -48.71830 -48.59710 -43.28610 -41.54670 -39.89946 -39.18001 -37.43923 -37.27971 -34.40705 -34.07218 -32.16076 -30.45942 -28.95172 -28.16038 -27.30613 -26.86598 -25.21653 -24.27451 -23.29212 -22.79770 -21.45685 -21.10312 -19.69171 -19.45708 -19.31112 -19.10436 -18.58489 -17.94749 -17.60951 -17.21186 -16.94047 -16.90047 -16.54710 -16.51214 -15.92207 -15.84543 -15.64652 -15.56526 -15.50871 -15.44939 -15.08315 -14.92709 -14.78688 -14.73125 -14.59333 -14.41630 -14.13518 -14.08282 -13.76506 -13.39718 -13.29970 -13.10669 -13.02272 -12.76883 -12.72193 -12.56224 -12.12779 -11.93895 -11.77403 -11.58020 -11.03540 -10.87041 -10.78660 -10.30073 -10.12776 -8.76589 -5.08618 -0.56641 -0.10993 1.00374 1.04415 1.09530 1.46474 1.50608 1.76979 2.00538 2.04546 2.20434 2.48609 2.58449 2.64135 2.84105 2.94428 3.12492 3.29431 3.41356 3.42848 3.51954 3.52265 3.69301 3.84814 3.89720 4.00694 4.10469 4.14783 4.19458 4.24060 4.28478 4.32605 4.36427 4.49008 4.53354 4.62977 4.71985 4.75169 4.89004 5.10294 5.15306 5.25667 5.42157 5.65501 5.65944 6.24887 6.31359 6.53033 7.32991 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.330 6.330 3 C 0.044 3.956 4 C 0.440 3.560 5 F -0.175 7.175 6 F -0.173 7.173 7 F -0.181 7.181 8 C -0.133 4.133 9 C 0.146 3.854 10 H 0.132 0.868 11 N -0.720 5.720 12 C 0.606 3.394 13 O -0.545 6.545 14 C -0.319 4.319 15 C 0.171 3.829 16 C -0.093 4.093 17 C -0.024 4.024 18 C -0.077 4.077 19 O -0.532 6.532 20 Si 0.692 3.308 21 C -0.144 4.144 22 C 0.116 3.884 23 N -0.264 5.264 24 N -0.313 5.313 25 C 0.120 3.880 26 C -0.163 4.163 27 H 0.103 0.897 28 H 0.056 0.944 29 H 0.052 0.948 30 H 0.115 0.885 31 H 0.102 0.898 32 H 0.401 0.599 33 H 0.165 0.835 34 H 0.085 0.915 35 H 0.385 0.615 36 H -0.252 1.252 37 H -0.248 1.248 38 H 0.160 0.840 39 H 0.177 0.823 40 H 0.199 0.801 41 H 0.100 0.900 42 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.725 0.333 4.079 4.442 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.247 6.247 3 C 0.001 3.999 4 C 0.385 3.615 5 F -0.156 7.156 6 F -0.154 7.154 7 F -0.162 7.162 8 C -0.171 4.171 9 C 0.041 3.959 10 H 0.149 0.851 11 N -0.371 5.371 12 C 0.395 3.605 13 O -0.423 6.423 14 C -0.334 4.334 15 C 0.050 3.950 16 C -0.113 4.113 17 C -0.030 4.030 18 C -0.186 4.186 19 O -0.340 6.340 20 Si 0.590 3.410 21 C -0.165 4.165 22 C -0.010 4.010 23 N -0.028 5.028 24 N -0.133 5.133 25 C -0.061 4.061 26 C -0.201 4.201 27 H 0.121 0.879 28 H 0.075 0.925 29 H 0.071 0.929 30 H 0.133 0.867 31 H 0.120 0.880 32 H 0.236 0.764 33 H 0.183 0.817 34 H 0.103 0.897 35 H 0.234 0.766 36 H -0.176 1.176 37 H -0.172 1.172 38 H 0.177 0.823 39 H 0.195 0.805 40 H 0.215 0.785 41 H 0.119 0.881 42 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges -0.856 1.028 5.132 5.304 hybrid contribution 0.254 -0.375 -1.218 1.300 sum -0.602 0.653 3.914 4.014 Atomic orbital electron populations 1.23146 0.79420 1.04466 1.01437 1.88131 1.21160 1.21486 1.93946 1.23567 1.00016 0.86497 0.89818 1.21070 0.74317 0.78652 0.87485 1.93177 1.68937 1.56941 1.96578 1.93228 1.94923 1.70662 1.56597 1.93194 1.36840 1.89367 1.96826 1.23752 0.91188 1.05976 0.96229 1.22179 0.89044 0.94933 0.89789 0.85063 1.45601 1.44278 1.10095 1.37108 1.16843 0.78126 0.87107 0.78397 1.90795 1.66814 1.15848 1.68852 1.19533 1.12196 0.93399 1.08236 1.19223 0.94241 0.87019 0.94529 1.20666 0.98492 0.97082 0.95010 1.19360 0.94931 0.94264 0.94419 1.24730 0.85058 0.96565 1.12218 1.86575 1.19642 1.46595 1.81189 0.94465 0.91859 0.81534 0.73102 1.20800 1.02631 0.90134 1.02944 1.21571 0.90459 1.01267 0.87741 1.46091 1.27317 1.06084 1.23344 1.77646 1.16960 1.07640 1.11055 1.24057 0.94043 0.92865 0.95140 1.24021 1.00690 1.01263 0.94120 0.87898 0.92549 0.92930 0.86697 0.87967 0.76439 0.81719 0.89745 0.76615 1.17563 1.17157 0.82287 0.80541 0.78491 0.88134 0.87349 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 101.05 1.04 1.03 16 2 O -0.33 -0.22 10.33 -35.23 -0.36 -0.59 16 3 C 0.04 -0.02 0.85 -89.81 -0.08 -0.10 16 4 C 0.44 0.38 2.52 37.16 0.09 0.48 16 5 F -0.17 -0.12 15.82 2.25 0.04 -0.09 16 6 F -0.17 -0.48 17.10 2.25 0.04 -0.44 16 7 F -0.18 -0.18 15.38 2.25 0.03 -0.15 16 8 C -0.13 0.12 7.13 -25.92 -0.18 -0.06 16 9 C 0.15 -0.17 4.18 -67.12 -0.28 -0.45 16 10 H 0.13 0.07 7.46 -51.93 -0.39 -0.32 16 11 N -0.72 0.96 5.35 -54.35 -0.29 0.67 16 12 C 0.61 1.18 7.78 -12.90 -0.10 1.08 16 13 O -0.54 -2.74 15.30 5.17 0.08 -2.66 16 14 C -0.32 -0.56 6.17 -104.68 -0.65 -1.21 16 15 C 0.17 0.42 6.76 -84.07 -0.57 -0.15 16 16 C -0.09 -0.12 9.35 -39.53 -0.37 -0.49 16 17 C -0.02 0.00 4.53 -104.55 -0.47 -0.47 16 18 C -0.08 0.12 2.81 36.01 0.10 0.22 16 19 O -0.53 0.32 12.76 -35.23 -0.45 -0.13 16 20 Si 0.69 -1.73 31.97 -169.99 -5.43 -7.16 16 21 C -0.14 0.10 8.67 -39.95 -0.35 -0.24 16 22 C 0.12 -0.03 11.18 -16.68 -0.19 -0.22 16 23 N -0.26 -0.55 3.86 -10.55 -0.04 -0.59 16 24 N -0.31 -0.75 12.57 30.75 0.39 -0.36 16 25 C 0.12 0.02 11.44 -17.15 -0.20 -0.18 16 26 C -0.16 0.42 6.66 -25.92 -0.17 0.24 16 27 H 0.10 -0.26 8.14 -51.93 -0.42 -0.68 16 28 H 0.06 -0.15 6.58 -51.93 -0.34 -0.50 16 29 H 0.05 -0.05 6.63 -51.93 -0.34 -0.39 16 30 H 0.11 -0.21 7.02 -51.93 -0.36 -0.57 16 31 H 0.10 -0.01 8.14 -51.93 -0.42 -0.43 16 32 H 0.40 -1.65 7.65 -40.82 -0.31 -1.96 16 33 H 0.17 0.20 7.01 -52.49 -0.37 -0.17 16 34 H 0.08 -0.24 7.71 -51.93 -0.40 -0.64 16 35 H 0.39 -1.72 8.74 45.56 0.40 -1.32 16 36 H -0.25 0.13 7.11 56.52 0.40 0.53 16 37 H -0.25 0.06 7.07 56.52 0.40 0.46 16 38 H 0.16 -0.35 7.52 -52.49 -0.39 -0.74 16 39 H 0.18 -0.53 8.06 -52.49 -0.42 -0.95 16 40 H 0.20 -0.84 7.46 -52.49 -0.39 -1.23 16 41 H 0.10 -0.32 6.68 -51.92 -0.35 -0.67 16 42 H 0.11 -0.43 8.04 -51.93 -0.42 -0.85 16 LS Contribution 367.78 15.07 5.54 5.54 Total: 0.00 -9.95 367.78 -6.96 -16.91 By element: Atomic # 1 Polarization: -6.29 SS G_CDS: -4.14 Total: -10.43 kcal Atomic # 6 Polarization: 1.85 SS G_CDS: -2.36 Total: -0.52 kcal Atomic # 7 Polarization: -0.34 SS G_CDS: 0.06 Total: -0.28 kcal Atomic # 8 Polarization: -2.65 SS G_CDS: -0.73 Total: -3.38 kcal Atomic # 9 Polarization: -0.79 SS G_CDS: 0.11 Total: -0.68 kcal Atomic # 14 Polarization: -1.73 SS G_CDS: -5.43 Total: -7.16 kcal Total LS contribution 5.54 Total: 5.54 kcal Total: -9.95 -6.96 -16.91 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_11618758.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -95.500 kcal (2) G-P(sol) polarization free energy of solvation -9.951 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -105.451 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.961 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -16.912 kcal (6) G-S(sol) free energy of system = (1) + (5) -112.412 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.93 seconds