Wall clock time and date at job start Tue Mar 9 2021 14:37:29 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42896 * 1 3 3 C 1.42895 * 114.00275 * 2 1 4 4 C 1.52997 * 112.85322 * 71.96674 * 3 2 1 5 5 F 1.39899 * 109.47217 * 284.15929 * 4 3 2 6 6 F 1.39901 * 109.46934 * 44.16374 * 4 3 2 7 7 F 1.39902 * 109.46924 * 164.16026 * 4 3 2 8 8 C 1.53784 * 113.61179 * 300.77487 * 3 2 1 9 9 C 1.53784 * 87.08151 * 270.88716 * 8 3 2 10 10 H 1.09000 * 113.61726 * 89.19655 * 9 8 3 11 11 N 1.46502 * 113.61336 * 220.01991 * 9 8 3 12 12 C 1.34777 * 120.00195 * 203.46672 * 11 9 8 13 13 O 1.21702 * 119.99503 * 359.97438 * 12 11 9 14 14 C 1.46671 * 120.00300 * 180.02562 * 12 11 9 15 15 C 1.37872 * 126.23411 * 180.33371 * 14 12 11 16 16 C 1.50703 * 126.45623 * 359.95356 * 15 14 12 17 17 C 1.39835 * 107.08769 * 180.11388 * 15 14 12 18 18 C 1.50690 * 126.06981 * 179.83763 * 17 15 14 19 19 O 1.42897 * 109.47380 * 65.15415 * 18 17 15 20 20 Si 1.86295 * 109.47355 * 305.14990 * 18 17 15 21 21 C 1.35458 * 107.86072 * 359.57824 * 17 15 14 22 22 C 1.50703 * 125.56182 * 180.24176 * 21 17 15 23 23 N 1.35536 * 108.87237 * 0.25690 * 21 17 15 24 24 C 1.53785 * 87.16884 * 334.60585 * 9 8 3 25 25 H 1.08997 * 109.47480 * 186.26167 * 1 2 3 26 26 H 1.08998 * 109.47539 * 306.26277 * 1 2 3 27 27 H 1.09007 * 109.47297 * 66.26186 * 1 2 3 28 28 H 1.08998 * 113.61823 * 156.33530 * 8 3 2 29 29 H 1.09010 * 113.69017 * 25.44169 * 8 3 2 30 30 H 0.97005 * 119.99779 * 23.46714 * 11 9 8 31 31 H 1.09008 * 109.46475 * 270.19099 * 16 15 14 32 32 H 1.08992 * 109.47425 * 30.19451 * 16 15 14 33 33 H 1.08998 * 109.47179 * 150.20100 * 16 15 14 34 34 H 1.09011 * 109.47351 * 185.14956 * 18 17 15 35 35 H 0.96706 * 113.99670 * 300.00006 * 19 18 17 36 36 H 1.48501 * 110.00059 * 58.68103 * 20 18 17 37 37 H 1.48500 * 110.00378 * 180.02562 * 20 18 17 38 38 H 1.09004 * 109.47128 * 93.59235 * 22 21 17 39 39 H 1.09002 * 109.46801 * 213.59164 * 22 21 17 40 40 H 1.08997 * 109.47104 * 333.59473 * 22 21 17 41 41 H 0.96998 * 125.67258 * 179.97438 * 23 21 17 42 42 H 1.09008 * 113.61146 * 139.94017 * 24 9 8 43 43 H 1.08996 * 113.61955 * 270.84044 * 24 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3054 0.0000 4 6 1.8532 2.0257 1.3406 5 9 0.5381 2.4842 1.4725 6 9 2.1450 1.1396 2.3831 7 9 2.7331 3.1122 1.3920 8 6 1.6022 2.1614 -1.2107 9 6 2.8149 1.5632 -1.9430 10 1 2.5912 0.6386 -2.4752 11 7 3.5397 2.5333 -2.7675 12 6 4.2920 2.1094 -3.8023 13 8 4.3696 0.9207 -4.0514 14 6 5.0181 3.0806 -4.6275 15 6 5.8153 2.7916 -5.7146 16 6 6.1037 1.4227 -6.2750 17 6 6.3089 4.0078 -6.1969 18 6 7.2295 4.1864 -7.3765 19 8 6.5575 3.7819 -8.5709 20 14 8.7542 3.1428 -7.1380 21 6 5.8080 4.9973 -5.4192 22 6 6.0806 6.4695 -5.5902 23 7 5.0220 4.4470 -4.4619 24 6 3.4447 1.3397 -0.5579 25 1 -0.3634 -1.0215 0.1121 26 1 -0.3634 0.6078 0.8286 27 1 -0.3634 0.4137 -0.9408 28 1 1.6838 3.2339 -1.0346 29 1 0.6446 1.8756 -1.6463 30 1 3.4781 3.4807 -2.5687 31 1 6.9868 1.0093 -5.7877 32 1 5.2501 0.7693 -6.0952 33 1 6.2830 1.4995 -7.3474 34 1 7.5161 5.2350 -7.4583 35 1 6.2730 2.8576 -8.5683 36 1 8.3745 1.7145 -6.9933 37 1 9.6706 3.3106 -8.2944 38 1 5.2969 6.9154 -6.2028 39 1 6.0965 6.9520 -4.6129 40 1 7.0454 6.6061 -6.0786 41 1 4.5425 4.9350 -3.7743 42 1 3.9726 0.3904 -0.4663 43 1 4.0311 2.1871 -0.2029 There are 64 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 64 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16772210_12297754.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:37:29 Heat of formation + Delta-G solvation = -183.033859 kcal Electronic energy + Delta-G solvation = -32080.660667 eV Core-core repulsion = 27100.749784 eV Total energy + Delta-G solvation = -4979.910883 eV No. of doubly occupied orbitals = 64 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 349.133 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -51.25546 -48.81406 -48.67713 -42.74619 -41.63177 -39.88417 -37.83276 -37.42338 -34.67128 -33.78815 -32.88559 -29.41551 -29.33066 -28.29636 -27.47501 -26.94022 -26.42587 -24.13221 -22.45496 -21.56357 -20.97972 -20.23734 -19.75756 -19.55057 -19.46717 -19.20988 -17.75743 -17.51540 -16.99244 -16.83777 -16.55304 -16.43905 -15.99346 -15.78015 -15.62374 -15.57601 -15.46852 -15.27884 -15.14063 -14.90203 -14.87096 -14.80642 -14.58782 -14.36538 -14.19082 -13.93577 -13.77566 -13.67514 -13.50122 -13.33381 -13.26909 -13.20940 -12.83683 -12.72297 -12.66693 -12.32748 -11.90852 -11.50627 -11.13663 -10.91372 -10.70127 -10.37758 -9.56572 -9.03371 -4.82178 0.33429 1.28430 1.38412 1.56674 1.76385 1.84943 1.92338 1.97682 2.14284 2.26273 2.43790 2.52885 2.71126 3.15778 3.28438 3.39633 3.53607 3.66495 3.68777 3.80761 3.93544 4.00182 4.02596 4.09152 4.14034 4.24098 4.28669 4.34677 4.37684 4.46121 4.51942 4.55349 4.62784 4.67556 4.78977 4.85851 4.97091 5.08765 5.16325 5.31888 5.55709 5.64727 5.85027 6.18790 6.34367 6.53843 7.02958 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.009 3.991 2 O -0.329 6.329 3 C 0.045 3.955 4 C 0.441 3.559 5 F -0.181 7.181 6 F -0.171 7.171 7 F -0.176 7.176 8 C -0.164 4.164 9 C 0.143 3.857 10 H 0.133 0.867 11 N -0.724 5.724 12 C 0.595 3.405 13 O -0.518 6.518 14 C -0.062 4.062 15 C -0.057 4.057 16 C -0.098 4.098 17 C -0.205 4.205 18 C -0.035 4.035 19 O -0.531 6.531 20 Si 0.670 3.330 21 C 0.087 3.913 22 C -0.097 4.097 23 N -0.537 5.537 24 C -0.132 4.132 25 H 0.103 0.897 26 H 0.055 0.945 27 H 0.056 0.944 28 H 0.107 0.893 29 H 0.102 0.898 30 H 0.396 0.604 31 H 0.076 0.924 32 H 0.086 0.914 33 H 0.055 0.945 34 H 0.111 0.889 35 H 0.372 0.628 36 H -0.241 1.241 37 H -0.260 1.260 38 H 0.079 0.921 39 H 0.071 0.929 40 H 0.089 0.911 41 H 0.415 0.585 42 H 0.104 0.896 43 H 0.114 0.886 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.841 4.740 1.592 5.071 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.086 4.086 2 O -0.247 6.247 3 C 0.002 3.998 4 C 0.387 3.613 5 F -0.162 7.162 6 F -0.152 7.152 7 F -0.157 7.157 8 C -0.202 4.202 9 C 0.038 3.962 10 H 0.150 0.850 11 N -0.375 5.375 12 C 0.384 3.616 13 O -0.393 6.393 14 C -0.173 4.173 15 C -0.066 4.066 16 C -0.155 4.155 17 C -0.212 4.212 18 C -0.145 4.145 19 O -0.339 6.339 20 Si 0.570 3.430 21 C -0.032 4.032 22 C -0.154 4.154 23 N -0.134 5.134 24 C -0.170 4.170 25 H 0.121 0.879 26 H 0.074 0.926 27 H 0.074 0.926 28 H 0.126 0.874 29 H 0.120 0.880 30 H 0.230 0.770 31 H 0.095 0.905 32 H 0.105 0.895 33 H 0.073 0.927 34 H 0.129 0.871 35 H 0.221 0.779 36 H -0.165 1.165 37 H -0.185 1.185 38 H 0.098 0.902 39 H 0.090 0.910 40 H 0.108 0.892 41 H 0.253 0.747 42 H 0.123 0.877 43 H 0.132 0.868 Dipole moment (debyes) X Y Z Total from point charges -0.182 3.675 1.088 3.837 hybrid contribution -1.642 0.657 0.443 1.823 sum -1.825 4.332 1.530 4.943 Atomic orbital electron populations 1.23179 0.79333 1.04598 1.01523 1.88137 1.21264 1.21371 1.93921 1.23556 1.00423 0.86886 0.88963 1.21037 0.73878 0.77918 0.88517 1.93187 1.36742 1.89645 1.96621 1.93232 1.93014 1.68054 1.60937 1.93175 1.69189 1.56591 1.96774 1.24020 1.01029 1.00923 0.94219 1.22246 0.90317 0.94079 0.89529 0.84970 1.45786 1.50099 1.09969 1.31677 1.17030 0.78039 0.87490 0.79087 1.90859 1.63015 1.15737 1.69671 1.19913 1.11032 0.82175 1.04162 1.19721 0.97174 0.95352 0.94345 1.20622 1.03590 0.92351 0.98900 1.19436 1.07507 0.92028 1.02210 1.24239 1.01172 1.06498 0.82631 1.86602 1.77122 1.32570 1.37556 0.95115 0.78934 0.81225 0.87757 1.20301 0.95750 0.95633 0.91482 1.20520 1.03846 0.87910 1.03112 1.41804 1.39053 1.06028 1.26506 1.23763 0.92279 1.05982 0.94993 0.87865 0.92609 0.92588 0.87419 0.87977 0.76973 0.90504 0.89537 0.92675 0.87103 0.77902 1.16469 1.18477 0.90196 0.90968 0.89190 0.74700 0.87738 0.86757 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.02 10.50 101.05 1.06 1.04 16 2 O -0.33 -0.10 10.33 -35.23 -0.36 -0.46 16 3 C 0.05 -0.05 0.84 -89.72 -0.08 -0.12 16 4 C 0.44 0.16 2.67 37.16 0.10 0.26 16 5 F -0.18 -0.11 15.26 2.25 0.03 -0.07 16 6 F -0.17 -0.41 17.10 2.25 0.04 -0.37 16 7 F -0.18 -0.01 15.83 2.25 0.04 0.03 16 8 C -0.16 0.51 6.63 -25.92 -0.17 0.34 16 9 C 0.14 -0.25 4.15 -67.11 -0.28 -0.53 16 10 H 0.13 0.00 7.50 -51.93 -0.39 -0.39 16 11 N -0.72 1.57 5.36 -54.32 -0.29 1.28 16 12 C 0.59 0.71 7.79 -12.86 -0.10 0.61 16 13 O -0.52 -2.40 14.43 5.19 0.07 -2.32 16 14 C -0.06 -0.04 7.06 -81.98 -0.58 -0.62 16 15 C -0.06 -0.09 5.82 -104.16 -0.61 -0.70 16 16 C -0.10 -0.17 7.71 36.01 0.28 0.10 16 17 C -0.21 -0.08 4.66 -105.02 -0.49 -0.57 16 18 C -0.03 -0.01 2.85 36.00 0.10 0.10 16 19 O -0.53 -1.14 12.88 -35.23 -0.45 -1.60 16 20 Si 0.67 -0.09 30.98 -169.99 -5.27 -5.36 16 21 C 0.09 -0.12 7.13 -81.95 -0.58 -0.70 16 22 C -0.10 0.38 10.16 36.01 0.37 0.74 16 23 N -0.54 1.21 5.99 -5.69 -0.03 1.17 16 24 C -0.13 0.20 7.15 -25.83 -0.18 0.02 16 25 H 0.10 -0.28 8.14 -51.93 -0.42 -0.70 16 26 H 0.06 -0.08 6.18 -51.93 -0.32 -0.40 16 27 H 0.06 -0.18 6.65 -51.92 -0.35 -0.52 16 28 H 0.11 -0.49 8.01 -51.93 -0.42 -0.91 16 29 H 0.10 -0.38 6.49 -51.92 -0.34 -0.71 16 30 H 0.40 -1.99 7.84 -40.82 -0.32 -2.31 16 31 H 0.08 0.15 7.16 -51.92 -0.37 -0.22 16 32 H 0.09 0.27 6.50 -51.93 -0.34 -0.07 16 33 H 0.05 0.03 5.07 -51.93 -0.26 -0.24 16 34 H 0.11 -0.13 6.45 -51.92 -0.33 -0.47 16 35 H 0.37 0.05 6.57 45.56 0.30 0.35 16 36 H -0.24 -0.34 5.06 56.52 0.29 -0.06 16 37 H -0.26 -0.77 7.11 56.52 0.40 -0.37 16 38 H 0.08 -0.30 8.14 -51.93 -0.42 -0.73 16 39 H 0.07 -0.39 8.14 -51.93 -0.42 -0.81 16 40 H 0.09 -0.40 6.87 -51.93 -0.36 -0.76 16 41 H 0.42 -2.29 8.19 -40.82 -0.33 -2.62 16 42 H 0.10 -0.07 8.14 -51.92 -0.42 -0.50 16 43 H 0.11 -0.29 7.04 -51.93 -0.37 -0.66 16 LS Contribution 354.51 15.07 5.34 5.34 Total: 0.00 -8.23 354.51 -7.24 -15.48 By element: Atomic # 1 Polarization: -7.90 SS G_CDS: -5.20 Total: -13.09 kcal Atomic # 6 Polarization: 1.14 SS G_CDS: -1.16 Total: -0.02 kcal Atomic # 7 Polarization: 2.78 SS G_CDS: -0.33 Total: 2.45 kcal Atomic # 8 Polarization: -3.64 SS G_CDS: -0.74 Total: -4.38 kcal Atomic # 9 Polarization: -0.52 SS G_CDS: 0.11 Total: -0.41 kcal Atomic # 14 Polarization: -0.09 SS G_CDS: -5.27 Total: -5.36 kcal Total LS contribution 5.34 Total: 5.34 kcal Total: -8.23 -7.24 -15.48 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_12297754.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -167.558 kcal (2) G-P(sol) polarization free energy of solvation -8.233 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -175.791 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -7.243 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -15.476 kcal (6) G-S(sol) free energy of system = (1) + (5) -183.034 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds