Wall clock time and date at job start Tue Mar 9 2021 14:39:19 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42893 * 1 3 3 C 1.42902 * 113.99992 * 2 1 4 4 C 1.52998 * 112.90686 * 294.01117 * 3 2 1 5 5 F 1.39901 * 109.47193 * 196.27620 * 4 3 2 6 6 F 1.39899 * 109.47391 * 316.27943 * 4 3 2 7 7 F 1.39905 * 109.46987 * 76.27738 * 4 3 2 8 8 C 1.53782 * 113.61558 * 162.76039 * 3 2 1 9 9 C 1.53780 * 87.08169 * 270.88661 * 8 3 2 10 10 H 1.08989 * 113.61597 * 89.11596 * 9 8 3 11 11 N 1.46504 * 113.61025 * 220.01937 * 9 8 3 12 12 C 1.34770 * 119.99921 * 252.49512 * 11 9 8 13 13 O 1.21616 * 120.00124 * 0.02562 * 12 11 9 14 14 C 1.47377 * 120.00340 * 180.02562 * 12 11 9 15 15 C 1.36416 * 127.19706 * 179.97438 * 14 12 11 16 16 C 1.50702 * 125.79908 * 359.96633 * 15 14 12 17 17 O 1.33650 * 108.39876 * 179.97438 * 15 14 12 18 18 C 1.34218 * 110.90807 * 0.02562 * 17 15 14 19 19 C 1.50705 * 125.43626 * 180.02562 * 18 17 15 20 20 O 1.42894 * 109.46823 * 245.02242 * 19 18 17 21 21 Si 1.86298 * 109.47102 * 5.02480 * 19 18 17 22 22 C 1.34181 * 109.12447 * 359.74850 * 18 17 15 23 23 C 1.53775 * 113.61537 * 65.26555 * 3 2 1 24 24 H 1.08997 * 109.47552 * 303.55001 * 1 2 3 25 25 H 1.08998 * 109.47161 * 63.55296 * 1 2 3 26 26 H 1.09003 * 109.46893 * 183.55008 * 1 2 3 27 27 H 1.09001 * 113.61333 * 156.33214 * 8 3 2 28 28 H 1.08999 * 113.69088 * 25.44899 * 8 3 2 29 29 H 0.97002 * 120.00031 * 72.49868 * 11 9 8 30 30 H 1.08997 * 109.47015 * 89.99692 * 16 15 14 31 31 H 1.08998 * 109.47068 * 209.99562 * 16 15 14 32 32 H 1.09002 * 109.47093 * 329.99826 * 16 15 14 33 33 H 1.08998 * 109.47017 * 125.02422 * 19 18 17 34 34 H 0.96702 * 114.00151 * 59.99958 * 20 19 18 35 35 H 1.48497 * 110.00239 * 58.68115 * 21 19 18 36 36 H 1.48500 * 109.99636 * 180.02562 * 21 19 18 37 37 H 1.07999 * 127.02238 * 180.26955 * 22 18 17 38 38 H 1.09003 * 113.61501 * 334.56623 * 23 3 2 39 39 H 1.08998 * 113.61894 * 203.66956 * 23 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4289 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7285 2.0828 -1.2874 5 9 2.6087 3.1662 -1.3800 6 9 1.9083 1.2403 -2.3897 7 9 0.4108 2.5526 -1.2696 8 6 3.4901 1.3209 0.4176 9 6 2.9985 1.4816 1.8658 10 1 2.8253 0.5341 2.3758 11 7 3.8011 2.4172 2.6575 12 6 4.6256 1.9529 3.6171 13 8 4.7037 0.7572 3.8256 14 6 5.4327 2.8939 4.4140 15 6 6.3080 2.5876 5.4145 16 6 6.6281 1.2016 5.9121 17 8 6.8334 3.7256 5.8785 18 6 6.3373 4.7853 5.2209 19 6 6.7048 6.2239 5.4785 20 8 5.5608 6.9277 5.9661 21 14 8.0674 6.2992 6.7468 22 6 5.4665 4.3588 4.2933 23 6 1.7222 2.1080 1.2797 24 1 -0.3634 0.5679 0.8564 25 1 -0.3633 0.4577 -0.9201 26 1 -0.3633 -1.0257 0.0636 27 1 4.0400 2.1850 0.0446 28 1 4.0069 0.3789 0.2339 29 1 3.7391 3.3708 2.4911 30 1 7.4659 0.7963 5.3447 31 1 6.8928 1.2469 6.9685 32 1 5.7571 0.5590 5.7829 33 1 7.0460 6.6835 4.5509 34 1 5.2025 6.5725 6.7911 35 1 9.2518 5.5439 6.2653 36 1 8.4384 7.7128 7.0101 37 1 4.9042 4.9674 3.6007 38 1 0.8102 1.8009 1.7918 39 1 1.7886 3.1873 1.1426 There are 61 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 61 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16772210_13308374.mol2 39 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:39:19 Heat of formation + Delta-G solvation = -208.254568 kcal Electronic energy + Delta-G solvation = -29903.826207 eV Core-core repulsion = 24980.640629 eV Total energy + Delta-G solvation = -4923.185578 eV No. of doubly occupied orbitals = 61 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 336.106 amu Computer time = 0.68 seconds Orbital eigenvalues (eV) -51.21163 -48.76091 -48.63931 -43.78488 -41.63919 -40.00136 -38.12790 -37.39186 -34.63661 -33.87922 -33.09675 -29.66072 -28.97092 -28.20907 -26.92979 -26.07764 -24.76608 -23.50999 -22.14574 -21.54632 -20.62191 -19.69594 -19.49915 -19.26778 -18.96767 -18.00765 -17.70113 -17.42451 -16.88644 -16.71838 -16.51376 -16.09411 -15.90360 -15.77749 -15.64507 -15.54853 -15.48984 -15.11281 -14.84990 -14.82955 -14.73879 -14.59517 -14.27771 -14.16711 -14.03102 -13.92310 -13.81545 -13.44141 -13.15405 -12.96461 -12.86594 -12.79086 -12.62865 -12.18429 -11.84072 -11.14765 -10.99533 -10.92649 -10.68036 -10.23875 -9.61280 -5.10751 0.25161 0.78975 1.06601 1.35988 1.45869 1.70038 1.86347 1.95508 2.09304 2.24855 2.49946 2.58124 2.78351 3.11138 3.22916 3.32872 3.34837 3.45564 3.67809 3.71952 3.87432 4.05809 4.07985 4.15016 4.18203 4.22134 4.30297 4.36264 4.42666 4.51895 4.57285 4.60381 4.67532 4.70560 4.82426 5.06453 5.17138 5.30488 5.60546 5.87090 6.29562 6.37775 7.13400 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.011 3.989 2 O -0.330 6.330 3 C 0.045 3.955 4 C 0.440 3.560 5 F -0.175 7.175 6 F -0.172 7.172 7 F -0.180 7.180 8 C -0.133 4.133 9 C 0.143 3.857 10 H 0.132 0.868 11 N -0.715 5.715 12 C 0.597 3.403 13 O -0.534 6.534 14 C -0.256 4.256 15 C 0.099 3.901 16 C -0.088 4.088 17 O -0.167 6.167 18 C -0.055 4.055 19 C -0.028 4.028 20 O -0.531 6.531 21 Si 0.703 3.297 22 C -0.149 4.149 23 C -0.162 4.162 24 H 0.056 0.944 25 H 0.053 0.947 26 H 0.103 0.897 27 H 0.115 0.885 28 H 0.103 0.897 29 H 0.404 0.596 30 H 0.092 0.908 31 H 0.083 0.917 32 H 0.111 0.889 33 H 0.133 0.867 34 H 0.384 0.616 35 H -0.253 1.253 36 H -0.246 1.246 37 H 0.158 0.842 38 H 0.101 0.899 39 H 0.108 0.892 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.111 1.264 3.762 4.121 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.085 4.085 2 O -0.247 6.247 3 C 0.002 3.998 4 C 0.385 3.615 5 F -0.156 7.156 6 F -0.153 7.153 7 F -0.162 7.162 8 C -0.171 4.171 9 C 0.037 3.963 10 H 0.150 0.850 11 N -0.366 5.366 12 C 0.386 3.614 13 O -0.412 6.412 14 C -0.260 4.260 15 C 0.045 3.955 16 C -0.144 4.144 17 O -0.064 6.064 18 C -0.104 4.104 19 C -0.138 4.138 20 O -0.336 6.336 21 Si 0.603 3.397 22 C -0.168 4.168 23 C -0.201 4.201 24 H 0.074 0.926 25 H 0.071 0.929 26 H 0.122 0.878 27 H 0.133 0.867 28 H 0.121 0.879 29 H 0.239 0.761 30 H 0.111 0.889 31 H 0.102 0.898 32 H 0.130 0.870 33 H 0.151 0.849 34 H 0.232 0.768 35 H -0.177 1.177 36 H -0.171 1.171 37 H 0.176 0.824 38 H 0.119 0.881 39 H 0.127 0.873 Dipole moment (debyes) X Y Z Total from point charges 0.183 0.895 3.756 3.866 hybrid contribution -0.812 0.850 -1.397 1.826 sum -0.629 1.745 2.359 3.001 Atomic orbital electron populations 1.23153 0.79350 1.04518 1.01464 1.88131 1.21222 1.21402 1.93947 1.23542 0.99898 0.86531 0.89850 1.21049 0.74338 0.78653 0.87447 1.93179 1.69004 1.56876 1.96587 1.93227 1.94890 1.70719 1.56510 1.93200 1.36750 1.89404 1.96829 1.23739 0.91312 1.06018 0.96046 1.22235 0.89207 0.94909 0.89900 0.84994 1.45677 1.43759 1.10395 1.36738 1.17187 0.78414 0.87092 0.78724 1.90794 1.66533 1.15638 1.68256 1.21073 1.06914 0.93566 1.04467 1.22937 0.92008 0.87643 0.92898 1.20719 1.05253 0.86277 1.02107 1.83680 1.56188 1.13729 1.52834 1.22620 1.00870 0.89452 0.97412 1.24425 0.98098 0.83717 1.07580 1.86562 1.46085 1.55758 1.45219 0.94178 0.77158 0.82016 0.86360 1.22581 1.01056 0.92429 1.00730 1.24010 1.00591 1.01293 0.94159 0.92557 0.92881 0.87833 0.86715 0.87879 0.76114 0.88930 0.89834 0.87026 0.84942 0.76770 1.17729 1.17056 0.82442 0.88057 0.87346 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 101.05 1.04 1.03 16 2 O -0.33 -0.22 10.33 -35.23 -0.36 -0.59 16 3 C 0.05 -0.02 0.85 -89.81 -0.08 -0.10 16 4 C 0.44 0.41 2.52 37.16 0.09 0.50 16 5 F -0.18 -0.15 15.81 2.25 0.04 -0.11 16 6 F -0.17 -0.48 17.10 2.25 0.04 -0.44 16 7 F -0.18 -0.20 15.39 2.25 0.03 -0.16 16 8 C -0.13 0.12 7.13 -25.92 -0.18 -0.07 16 9 C 0.14 -0.15 4.17 -67.12 -0.28 -0.43 16 10 H 0.13 0.06 7.46 -51.94 -0.39 -0.33 16 11 N -0.71 0.74 5.35 -54.11 -0.29 0.45 16 12 C 0.60 1.01 7.81 -12.54 -0.10 0.92 16 13 O -0.53 -2.37 14.45 5.26 0.08 -2.29 16 14 C -0.26 -0.27 6.31 -103.28 -0.65 -0.92 16 15 C 0.10 0.08 7.37 -34.96 -0.26 -0.17 16 16 C -0.09 0.07 9.89 36.01 0.36 0.43 16 17 O -0.17 -0.08 8.90 7.65 0.07 -0.01 16 18 C -0.06 0.02 6.18 -35.74 -0.22 -0.20 16 19 C -0.03 0.04 2.97 36.01 0.11 0.15 16 20 O -0.53 0.79 12.88 -35.23 -0.45 0.34 16 21 Si 0.70 -1.18 32.09 -169.99 -5.46 -6.64 16 22 C -0.15 0.05 10.48 -37.45 -0.39 -0.34 16 23 C -0.16 0.38 6.66 -25.92 -0.17 0.21 16 24 H 0.06 -0.15 6.58 -51.93 -0.34 -0.49 16 25 H 0.05 -0.05 6.63 -51.93 -0.34 -0.39 16 26 H 0.10 -0.26 8.14 -51.93 -0.42 -0.69 16 27 H 0.11 -0.19 7.01 -51.93 -0.36 -0.56 16 28 H 0.10 -0.02 8.14 -51.93 -0.42 -0.45 16 29 H 0.40 -1.29 7.90 -40.82 -0.32 -1.61 16 30 H 0.09 -0.12 8.14 -51.93 -0.42 -0.55 16 31 H 0.08 -0.22 8.14 -51.93 -0.42 -0.64 16 32 H 0.11 0.03 6.49 -51.93 -0.34 -0.31 16 33 H 0.13 -0.27 7.96 -51.93 -0.41 -0.68 16 34 H 0.38 -1.97 8.70 45.56 0.40 -1.57 16 35 H -0.25 -0.35 7.11 56.52 0.40 0.05 16 36 H -0.25 -0.21 7.11 56.52 0.40 0.19 16 37 H 0.16 -0.38 7.74 -52.49 -0.41 -0.78 16 38 H 0.10 -0.31 6.68 -51.93 -0.35 -0.66 16 39 H 0.11 -0.39 8.03 -51.93 -0.42 -0.80 16 LS Contribution 342.94 15.07 5.17 5.17 Total: 0.00 -7.47 342.94 -6.05 -13.52 By element: Atomic # 1 Polarization: -6.09 SS G_CDS: -4.17 Total: -10.26 kcal Atomic # 6 Polarization: 1.74 SS G_CDS: -0.73 Total: 1.01 kcal Atomic # 7 Polarization: 0.74 SS G_CDS: -0.29 Total: 0.45 kcal Atomic # 8 Polarization: -1.87 SS G_CDS: -0.67 Total: -2.54 kcal Atomic # 9 Polarization: -0.82 SS G_CDS: 0.11 Total: -0.71 kcal Atomic # 14 Polarization: -1.18 SS G_CDS: -5.46 Total: -6.64 kcal Total LS contribution 5.17 Total: 5.17 kcal Total: -7.47 -6.05 -13.52 kcal The number of atoms in the molecule is 39 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_13308374.mol2 39 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -194.732 kcal (2) G-P(sol) polarization free energy of solvation -7.474 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -202.206 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -6.049 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -13.522 kcal (6) G-S(sol) free energy of system = (1) + (5) -208.255 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.68 seconds