Wall clock time and date at job start Tue Mar 9 2021 14:40:52 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.42897 * 114.00228 * 2 1 4 4 C 1.52997 * 112.90926 * 66.09850 * 3 2 1 5 5 F 1.39905 * 109.46917 * 283.52470 * 4 3 2 6 6 F 1.39897 * 109.46894 * 43.52550 * 4 3 2 7 7 F 1.39896 * 109.47107 * 163.52927 * 4 3 2 8 8 C 1.53790 * 113.61220 * 294.84555 * 3 2 1 9 9 C 1.53780 * 87.07987 * 270.88279 * 8 3 2 10 10 H 1.09002 * 113.61356 * 89.20187 * 9 8 3 11 11 N 1.46498 * 113.61429 * 220.01684 * 9 8 3 12 12 C 1.34770 * 120.00392 * 203.47404 * 11 9 8 13 13 O 1.21286 * 119.99665 * 0.02562 * 12 11 9 14 14 C 1.50700 * 120.00199 * 180.02562 * 12 11 9 15 15 O 1.42904 * 109.46928 * 180.02562 * 14 12 11 16 16 C 1.35902 * 117.00047 * 179.97438 * 15 14 12 17 17 C 1.38708 * 120.05849 * 180.25132 * 16 15 14 18 18 C 1.38165 * 119.94708 * 180.25699 * 17 16 15 19 19 C 1.50694 * 119.97741 * 179.74715 * 18 17 16 20 20 O 1.42901 * 109.47076 * 299.72382 * 19 18 17 21 21 Si 1.86298 * 109.47219 * 179.72179 * 19 18 17 22 22 C 1.38250 * 120.04932 * 359.46836 * 18 17 16 23 23 C 1.38278 * 120.11562 * 0.28138 * 22 18 17 24 24 C 1.38121 * 120.05710 * 359.97438 * 23 22 18 25 25 C 1.53777 * 87.17439 * 334.61200 * 9 8 3 26 26 H 1.09000 * 109.47227 * 302.51623 * 1 2 3 27 27 H 1.08999 * 109.46959 * 62.51402 * 1 2 3 28 28 H 1.08996 * 109.47121 * 182.50809 * 1 2 3 29 29 H 1.09001 * 113.60962 * 156.33603 * 8 3 2 30 30 H 1.08999 * 113.68832 * 25.44265 * 8 3 2 31 31 H 0.96996 * 119.99746 * 23.47552 * 11 9 8 32 32 H 1.09000 * 109.47201 * 60.00219 * 14 12 11 33 33 H 1.08994 * 109.47115 * 299.99748 * 14 12 11 34 34 H 1.07999 * 120.02847 * 359.97438 * 17 16 15 35 35 H 1.08997 * 109.47107 * 59.72149 * 19 18 17 36 36 H 0.96698 * 114.00210 * 180.02562 * 20 19 18 37 37 H 1.48506 * 109.99998 * 60.00401 * 21 19 18 38 38 H 1.48501 * 109.99681 * 181.31825 * 21 19 18 39 39 H 1.08002 * 119.94316 * 180.25519 * 22 18 17 40 40 H 1.07998 * 119.97605 * 179.97438 * 23 22 18 41 41 H 1.08000 * 120.03360 * 179.97438 * 24 23 22 42 42 H 1.09005 * 113.61302 * 139.94336 * 25 9 8 43 43 H 1.09004 * 113.61230 * 270.83797 * 25 9 8 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0103 1.3054 0.0000 4 6 1.7309 2.0817 1.2884 5 9 0.4146 2.5555 1.2713 6 9 1.9083 1.2371 2.3895 7 9 2.6143 3.1625 1.3825 8 6 1.7200 2.1090 -1.2787 9 6 2.9953 1.4830 -1.8674 10 1 2.8210 0.5365 -2.3792 11 7 3.7965 2.4191 -2.6599 12 6 4.6422 1.9537 -3.6004 13 8 4.7396 0.7598 -3.7909 14 6 5.4668 2.9165 -4.4152 15 8 6.2776 2.1866 -5.3382 16 6 7.0872 2.9107 -6.1550 17 6 7.8973 2.2670 -7.0787 18 6 8.7234 3.0052 -7.9043 19 6 9.6080 2.3062 -8.9042 20 8 10.5059 1.4324 -8.2169 21 14 10.5839 3.5718 -9.8615 22 6 8.7348 4.3849 -7.8178 23 6 7.9243 5.0293 -6.9013 24 6 7.1006 4.2957 -6.0701 25 6 3.4910 1.3190 -0.4210 26 1 -0.3634 0.5524 0.8666 27 1 -0.3633 0.4743 -0.9117 28 1 -0.3633 -1.0266 0.0450 29 1 1.7868 3.1882 -1.1408 30 1 0.8073 1.8033 -1.7903 31 1 3.7183 3.3738 -2.5077 32 1 6.1058 3.4994 -3.7518 33 1 4.8056 3.5868 -4.9642 34 1 7.8858 1.1894 -7.1494 35 1 8.9919 1.7265 -9.5916 36 1 11.1071 0.9486 -8.7996 37 1 11.4282 4.3688 -8.9356 38 1 11.4367 2.8969 -10.8727 39 1 9.3782 4.9604 -8.4669 40 1 7.9354 6.1072 -6.8354 41 1 6.4681 4.7994 -5.3542 42 1 4.0061 0.3755 -0.2403 43 1 4.0431 2.1819 -0.0482 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_4860298.mol2 43 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:40:52 Heat of formation + Delta-G solvation = -226.695290 kcal Electronic energy + Delta-G solvation = -32246.340201 eV Core-core repulsion = 27038.591214 eV Total energy + Delta-G solvation = -5207.748987 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 362.122 amu Computer time = 1.01 seconds Orbital eigenvalues (eV) -51.28587 -48.81231 -48.75560 -41.80455 -41.26647 -40.20549 -38.89404 -37.49530 -37.28674 -34.52063 -32.58532 -31.69319 -29.83549 -28.52168 -28.10638 -26.82946 -26.79410 -24.18946 -23.63946 -22.49007 -21.66356 -21.26442 -19.79344 -19.56838 -19.35010 -19.09499 -18.58828 -18.24033 -17.49265 -17.43626 -17.21757 -17.08133 -16.53485 -16.45190 -15.90127 -15.77646 -15.68086 -15.66938 -15.60631 -15.45818 -15.18598 -14.97446 -14.92276 -14.85500 -14.55633 -14.52601 -14.12250 -13.80214 -13.77045 -13.56271 -13.37409 -13.24148 -13.14054 -12.68259 -12.59373 -12.48993 -12.13762 -12.00776 -11.78583 -11.71417 -11.12874 -10.95362 -10.57732 -10.30080 -9.88080 -9.27083 -4.91766 0.21772 0.40544 1.25496 1.33939 1.37068 1.58696 1.62750 1.95656 2.06018 2.47995 2.54182 2.62157 2.65129 2.81892 3.23005 3.35242 3.37079 3.47972 3.52542 3.79503 3.84925 3.97407 4.03011 4.10214 4.15112 4.23871 4.24872 4.27860 4.28690 4.37196 4.40863 4.49954 4.57671 4.65677 4.69232 4.79133 4.80005 4.99116 5.24409 5.26863 5.37936 5.47896 5.68824 5.70286 6.26017 6.43304 6.55731 7.06941 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.004 3.996 2 O -0.351 6.351 3 C 0.040 3.960 4 C 0.439 3.561 5 F -0.181 7.181 6 F -0.188 7.188 7 F -0.172 7.172 8 C -0.144 4.144 9 C 0.141 3.859 10 H 0.107 0.893 11 N -0.697 5.697 12 C 0.516 3.484 13 O -0.569 6.569 14 C 0.036 3.964 15 O -0.323 6.323 16 C 0.115 3.885 17 C -0.152 4.152 18 C -0.048 4.048 19 C -0.098 4.098 20 O -0.561 6.561 21 Si 0.782 3.218 22 C -0.160 4.160 23 C -0.070 4.070 24 C -0.202 4.202 25 C -0.133 4.133 26 H 0.049 0.951 27 H 0.072 0.928 28 H 0.110 0.890 29 H 0.134 0.866 30 H 0.111 0.889 31 H 0.426 0.574 32 H 0.126 0.874 33 H 0.131 0.869 34 H 0.112 0.888 35 H 0.090 0.910 36 H 0.395 0.605 37 H -0.294 1.294 38 H -0.288 1.288 39 H 0.147 0.853 40 H 0.165 0.835 41 H 0.165 0.835 42 H 0.087 0.913 43 H 0.131 0.869 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.739 8.686 -3.150 9.967 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.091 4.091 2 O -0.269 6.269 3 C -0.003 4.003 4 C 0.384 3.616 5 F -0.162 7.162 6 F -0.169 7.169 7 F -0.154 7.154 8 C -0.182 4.182 9 C 0.035 3.965 10 H 0.125 0.875 11 N -0.351 5.351 12 C 0.303 3.697 13 O -0.447 6.447 14 C -0.041 4.041 15 O -0.237 6.237 16 C 0.070 3.930 17 C -0.171 4.171 18 C -0.049 4.049 19 C -0.206 4.206 20 O -0.371 6.371 21 Si 0.686 3.314 22 C -0.178 4.178 23 C -0.088 4.088 24 C -0.220 4.220 25 C -0.172 4.172 26 H 0.068 0.932 27 H 0.090 0.910 28 H 0.128 0.872 29 H 0.152 0.848 30 H 0.130 0.870 31 H 0.265 0.735 32 H 0.144 0.856 33 H 0.149 0.851 34 H 0.130 0.870 35 H 0.108 0.892 36 H 0.245 0.755 37 H -0.222 1.222 38 H -0.215 1.215 39 H 0.164 0.836 40 H 0.183 0.817 41 H 0.183 0.817 42 H 0.105 0.895 43 H 0.149 0.851 Dipole moment (debyes) X Y Z Total from point charges -3.146 7.980 -2.955 9.073 hybrid contribution 0.283 -0.963 0.972 1.397 sum -2.862 7.017 -1.984 7.834 Atomic orbital electron populations 1.23308 0.78442 1.05255 1.02075 1.88114 1.22366 1.22402 1.94033 1.23675 1.00131 0.86454 0.90049 1.21249 0.74293 0.78620 0.87423 1.93191 1.36946 1.89254 1.96820 1.93197 1.95009 1.71152 1.57540 1.93175 1.68698 1.56903 1.96578 1.24001 0.99828 1.02272 0.92092 1.22087 0.90349 0.94514 0.89503 0.87510 1.45533 1.41559 1.11427 1.36580 1.20598 0.80025 0.88947 0.80154 1.90787 1.66756 1.18770 1.68386 1.22766 0.95058 0.93573 0.92749 1.86118 1.53373 1.36009 1.48190 1.19151 0.91482 0.91263 0.91141 1.20294 0.98767 1.00208 0.97787 1.19276 0.95339 0.93882 0.96362 1.25253 0.96182 1.01029 0.98088 1.86555 1.52120 1.59975 1.38436 0.93988 0.81077 0.79178 0.77125 1.21175 1.02319 0.92849 1.01416 1.21327 0.93006 1.01710 0.92724 1.21650 1.04581 0.91327 1.04458 1.23822 0.91344 1.05961 0.96031 0.93217 0.90950 0.87219 0.84784 0.87021 0.73529 0.85606 0.85121 0.87015 0.89168 0.75492 1.22176 1.21515 0.83602 0.81724 0.81742 0.89466 0.85132 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.00 -0.01 10.44 113.37 1.18 1.17 16 2 O -0.35 -0.58 10.33 -148.98 -1.54 -2.12 16 3 C 0.04 -0.08 0.85 -10.21 -0.01 -0.09 16 4 C 0.44 0.22 2.52 71.98 0.18 0.40 16 5 F -0.18 -0.09 15.25 44.97 0.69 0.60 16 6 F -0.19 -1.02 17.10 44.97 0.77 -0.25 16 7 F -0.17 0.14 15.83 44.97 0.71 0.85 16 8 C -0.14 1.12 6.67 31.12 0.21 1.33 16 9 C 0.14 -0.51 4.15 45.52 0.19 -0.32 16 10 H 0.11 0.23 7.50 -2.39 -0.02 0.21 16 11 N -0.70 4.65 5.36 -440.05 -2.36 2.30 16 12 C 0.52 0.66 7.91 87.66 0.69 1.36 16 13 O -0.57 -7.80 16.12 15.99 0.26 -7.54 16 14 C 0.04 -0.15 5.22 71.24 0.37 0.23 16 15 O -0.32 -2.21 9.67 -73.41 -0.71 -2.92 16 16 C 0.11 0.57 6.69 22.51 0.15 0.72 16 17 C -0.15 -1.23 9.56 22.36 0.21 -1.02 16 18 C -0.05 -0.22 5.42 -19.88 -0.11 -0.33 16 19 C -0.10 -0.18 2.81 71.23 0.20 0.02 16 20 O -0.56 -3.02 12.75 -148.98 -1.90 -4.92 16 21 Si 0.78 -1.40 29.79 68.60 2.04 0.65 16 22 C -0.16 0.01 8.67 22.28 0.19 0.20 16 23 C -0.07 0.23 10.04 22.25 0.22 0.45 16 24 C -0.20 0.47 9.04 22.37 0.20 0.67 16 25 C -0.13 0.35 7.14 31.18 0.22 0.57 16 26 H 0.05 -0.11 6.26 -2.39 -0.01 -0.12 16 27 H 0.07 -0.48 6.76 -2.39 -0.02 -0.50 16 28 H 0.11 -0.52 8.14 -2.39 -0.02 -0.54 16 29 H 0.13 -1.68 8.03 -2.39 -0.02 -1.70 16 30 H 0.11 -1.02 6.74 -2.39 -0.02 -1.04 16 31 H 0.43 -6.40 8.71 -92.71 -0.81 -7.20 16 32 H 0.13 -1.30 7.66 -2.39 -0.02 -1.32 16 33 H 0.13 -1.47 7.66 -2.39 -0.02 -1.49 16 34 H 0.11 1.24 8.06 -2.91 -0.02 1.21 16 35 H 0.09 -0.11 7.96 -2.39 -0.02 -0.13 16 36 H 0.39 -1.21 8.74 -74.06 -0.65 -1.86 16 37 H -0.29 -1.40 7.11 99.48 0.71 -0.70 16 38 H -0.29 -0.70 7.11 99.48 0.71 0.01 16 39 H 0.15 -0.64 4.87 -2.91 -0.01 -0.65 16 40 H 0.17 -1.65 8.06 -2.91 -0.02 -1.67 16 41 H 0.17 -1.68 6.30 -2.91 -0.02 -1.70 16 42 H 0.09 0.08 8.14 -2.38 -0.02 0.06 16 43 H 0.13 -0.78 7.02 -2.39 -0.02 -0.80 16 Total: 0.00 -29.70 370.11 1.76 -27.94 By element: Atomic # 1 Polarization: -19.62 SS G_CDS: -0.32 Total: -19.94 kcal Atomic # 6 Polarization: 1.25 SS G_CDS: 4.11 Total: 5.37 kcal Atomic # 7 Polarization: 4.65 SS G_CDS: -2.36 Total: 2.30 kcal Atomic # 8 Polarization: -13.62 SS G_CDS: -3.89 Total: -17.51 kcal Atomic # 9 Polarization: -0.97 SS G_CDS: 2.17 Total: 1.20 kcal Atomic # 14 Polarization: -1.40 SS G_CDS: 2.04 Total: 0.65 kcal Total: -29.70 1.76 -27.94 kcal The number of atoms in the molecule is 43 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_4860298.mol2 43 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -198.756 kcal (2) G-P(sol) polarization free energy of solvation -29.699 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -228.455 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 1.760 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -27.939 kcal (6) G-S(sol) free energy of system = (1) + (5) -226.695 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.01 seconds