Wall clock time and date at job start Tue Mar 9 2021 14:41:27 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.42901 * 113.99917 * 2 1 4 4 C 1.52998 * 112.85096 * 294.01453 * 3 2 1 5 5 F 1.39898 * 109.47036 * 196.39807 * 4 3 2 6 6 F 1.39901 * 109.47169 * 316.39572 * 4 3 2 7 7 F 1.39901 * 109.47249 * 76.39935 * 4 3 2 8 8 C 1.53958 * 113.53261 * 162.70556 * 3 2 1 9 9 C 1.53777 * 87.01845 * 270.81253 * 8 3 2 10 10 H 1.09002 * 113.61771 * 89.23417 * 9 8 3 11 11 N 1.46503 * 113.61479 * 220.05062 * 9 8 3 12 12 C 1.34776 * 119.99835 * 254.14133 * 11 9 8 13 13 O 1.21632 * 120.00066 * 359.97438 * 12 11 9 14 14 C 1.47189 * 119.99952 * 180.27297 * 12 11 9 15 15 C 1.36015 * 123.46136 * 359.43356 * 14 12 11 16 16 S 1.70445 * 110.81865 * 179.85834 * 15 14 12 17 17 C 1.75508 * 92.44313 * 0.34134 * 16 15 14 18 18 C 1.50702 * 124.71121 * 179.78587 * 17 16 15 19 19 O 1.42890 * 109.47364 * 120.02260 * 18 17 16 20 20 Si 1.86302 * 109.47276 * 0.02562 * 18 17 16 21 21 C 1.32767 * 110.57689 * 359.80735 * 17 16 15 22 22 C 1.53778 * 113.61090 * 65.21390 * 3 2 1 23 23 H 1.09002 * 109.47242 * 63.52919 * 1 2 3 24 24 H 1.08998 * 109.47050 * 183.53287 * 1 2 3 25 25 H 1.09001 * 109.46878 * 303.52963 * 1 2 3 26 26 H 1.09005 * 113.60667 * 156.29364 * 8 3 2 27 27 H 1.08996 * 113.67126 * 25.34491 * 8 3 2 28 28 H 0.96994 * 120.00324 * 74.13285 * 11 9 8 29 29 H 1.07999 * 124.58605 * 359.96672 * 15 14 12 30 30 H 1.08998 * 109.47137 * 240.02394 * 18 17 16 31 31 H 0.96702 * 114.00467 * 299.99995 * 19 18 17 32 32 H 1.48502 * 110.00113 * 58.67975 * 20 18 17 33 33 H 1.48499 * 110.00379 * 180.02562 * 20 18 17 34 34 H 1.07999 * 123.45722 * 180.02562 * 21 17 16 35 35 H 1.08994 * 113.61848 * 334.56071 * 22 3 2 36 36 H 1.09003 * 113.68796 * 203.67442 * 22 3 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0102 1.3055 0.0000 4 6 1.7277 2.0816 -1.2879 5 9 2.6093 3.1637 -1.3831 6 9 1.9048 1.2376 -2.3894 7 9 0.4108 2.5533 -1.2687 8 6 3.4915 1.3189 0.4196 9 6 2.9970 1.4822 1.8665 10 1 2.8231 0.5356 2.3781 11 7 3.7989 2.4180 2.6587 12 6 4.6456 1.9521 3.5981 13 8 4.7435 0.7548 3.7886 14 6 5.4468 2.8925 4.3982 15 6 5.3969 4.2426 4.2410 16 16 6.4500 5.0191 5.3333 17 6 6.9848 3.4943 6.0183 18 6 7.9997 3.3593 7.1241 19 8 7.4009 2.7017 8.2426 20 14 8.5857 5.0510 7.6392 21 6 6.3714 2.4762 5.4267 22 6 1.7211 2.1084 1.2792 23 1 -0.3634 0.4581 -0.9199 24 1 -0.3633 -1.0257 0.0633 25 1 -0.3633 0.5677 0.8567 26 1 4.0430 2.1819 0.0466 27 1 4.0063 0.3755 0.2380 28 1 3.7206 3.3728 2.5070 29 1 4.7729 4.7535 3.5225 30 1 8.8477 2.7734 6.7695 31 1 6.6380 3.1681 8.6109 32 1 7.4341 5.8705 8.0949 33 1 9.5875 4.9317 8.7289 34 1 6.5455 1.4429 5.6880 35 1 0.8088 1.8015 1.7906 36 1 1.7873 3.1879 1.1431 There are 58 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 58 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). S: (AM1): M.J.S. DEWAR, Y.-C. YUAN, INORGANIC CHEM., 29, 589 (1990) REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16772210_6894386.mol2 36 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:41:27 Heat of formation + Delta-G solvation = -190.296638 kcal Electronic energy + Delta-G solvation = -27249.291085 eV Core-core repulsion = 22606.492519 eV Total energy + Delta-G solvation = -4642.798566 eV No. of doubly occupied orbitals = 58 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 338.063 amu Computer time = 0.67 seconds Orbital eigenvalues (eV) -51.27627 -48.80317 -48.74717 -41.72096 -40.47321 -38.87255 -37.45693 -37.10386 -34.49050 -31.73876 -29.09915 -28.13677 -26.96278 -26.82056 -25.99854 -23.72211 -22.10192 -21.43959 -20.51898 -19.81450 -19.55974 -19.25671 -18.89513 -18.13771 -17.72779 -17.25354 -16.77210 -16.55427 -16.40229 -15.99102 -15.82883 -15.70076 -15.62151 -15.56297 -15.19892 -15.13260 -14.92039 -14.88148 -14.70981 -14.38461 -14.04685 -13.85875 -13.60415 -13.54030 -13.30850 -13.13359 -12.70374 -12.62047 -12.56057 -12.42243 -11.85376 -11.77450 -11.13020 -10.97688 -10.75847 -10.31018 -9.96594 -9.43773 -5.03892 -0.32530 0.41227 0.71838 0.81512 1.23703 1.42956 1.57097 1.91929 2.01244 2.09100 2.22531 2.52394 2.59340 2.81344 3.23495 3.31361 3.37703 3.49274 3.61025 3.87160 3.96239 4.03482 4.22242 4.26033 4.29871 4.36936 4.41079 4.51661 4.57668 4.69747 4.72922 4.79253 4.81047 5.02969 5.17583 5.30863 5.69801 6.41039 6.41578 7.10368 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.005 3.995 2 O -0.350 6.350 3 C 0.042 3.958 4 C 0.439 3.561 5 F -0.172 7.172 6 F -0.187 7.187 7 F -0.181 7.181 8 C -0.131 4.131 9 C 0.140 3.860 10 H 0.108 0.892 11 N -0.699 5.699 12 C 0.579 3.421 13 O -0.580 6.580 14 C -0.184 4.184 15 C -0.188 4.188 16 S 0.252 5.748 17 C -0.247 4.247 18 C -0.047 4.047 19 O -0.545 6.545 20 Si 0.730 3.270 21 C -0.076 4.076 22 C -0.146 4.146 23 H 0.048 0.952 24 H 0.111 0.889 25 H 0.071 0.929 26 H 0.129 0.871 27 H 0.089 0.911 28 H 0.418 0.582 29 H 0.207 0.793 30 H 0.129 0.871 31 H 0.388 0.612 32 H -0.251 1.251 33 H -0.278 1.278 34 H 0.131 0.869 35 H 0.111 0.889 36 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.225 8.058 -0.290 8.155 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.090 4.090 2 O -0.268 6.268 3 C -0.001 4.001 4 C 0.384 3.616 5 F -0.154 7.154 6 F -0.168 7.168 7 F -0.162 7.162 8 C -0.170 4.170 9 C 0.035 3.965 10 H 0.126 0.874 11 N -0.351 5.351 12 C 0.367 3.633 13 O -0.460 6.460 14 C -0.202 4.202 15 C -0.326 4.326 16 S 0.519 5.481 17 C -0.364 4.364 18 C -0.157 4.157 19 O -0.353 6.353 20 Si 0.631 3.369 21 C -0.105 4.105 22 C -0.184 4.184 23 H 0.066 0.934 24 H 0.129 0.871 25 H 0.090 0.910 26 H 0.147 0.853 27 H 0.108 0.892 28 H 0.257 0.743 29 H 0.224 0.776 30 H 0.147 0.853 31 H 0.238 0.762 32 H -0.176 1.176 33 H -0.204 1.204 34 H 0.149 0.851 35 H 0.129 0.871 36 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges -0.190 8.730 0.634 8.755 hybrid contribution -1.646 -1.807 -0.272 2.460 sum -1.836 6.923 0.362 7.171 Atomic orbital electron populations 1.23298 0.78470 1.05394 1.01853 1.88116 1.22329 1.22347 1.94014 1.23659 1.00110 0.86418 0.89961 1.21237 0.74312 0.78625 0.87410 1.93175 1.68813 1.56812 1.96574 1.93197 1.95012 1.71163 1.57458 1.93195 1.36902 1.89335 1.96810 1.23805 0.91289 1.05995 0.95901 1.22106 0.90292 0.94496 0.89614 0.87357 1.45571 1.41604 1.10998 1.36911 1.17927 0.78976 0.87260 0.79148 1.90813 1.67841 1.17964 1.69430 1.20051 1.04326 0.93105 1.02684 1.26216 1.04416 0.96871 1.05116 1.82990 1.33277 1.05297 1.26562 1.24821 1.07480 0.97505 1.06579 1.24723 0.95899 1.10646 0.84455 1.86611 1.50175 1.51744 1.46794 0.94464 0.80825 0.73839 0.87755 1.20977 0.95151 1.00146 0.94235 1.24002 0.99893 1.02198 0.92315 0.93382 0.87072 0.91005 0.85278 0.89242 0.74291 0.77573 0.85339 0.76216 1.17558 1.20428 0.85096 0.87064 0.85009 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.01 -0.01 10.33 113.37 1.17 1.16 16 2 O -0.35 -0.66 10.32 -148.98 -1.54 -2.20 16 3 C 0.04 -0.06 0.85 -10.21 -0.01 -0.07 16 4 C 0.44 0.37 2.52 71.98 0.18 0.55 16 5 F -0.17 0.07 15.84 44.97 0.71 0.78 16 6 F -0.19 -1.04 17.09 44.97 0.77 -0.27 16 7 F -0.18 -0.15 15.39 44.97 0.69 0.54 16 8 C -0.13 0.26 7.15 31.18 0.22 0.48 16 9 C 0.14 -0.32 4.15 45.51 0.19 -0.13 16 10 H 0.11 0.33 7.50 -2.39 -0.02 0.31 16 11 N -0.70 2.62 5.33 -443.53 -2.36 0.26 16 12 C 0.58 2.47 7.79 86.59 0.67 3.14 16 13 O -0.58 -8.22 16.41 -4.13 -0.07 -8.28 16 14 C -0.18 -0.13 5.98 -19.87 -0.12 -0.25 16 15 C -0.19 1.29 10.38 67.30 0.70 1.98 16 16 S 0.25 -1.74 20.18 -56.49 -1.14 -2.88 16 17 C -0.25 0.31 5.68 24.51 0.14 0.45 16 18 C -0.05 0.07 2.95 71.24 0.21 0.28 16 19 O -0.54 -1.28 12.85 -148.98 -1.91 -3.19 16 20 Si 0.73 -3.07 30.91 68.60 2.12 -0.95 16 21 C -0.08 -0.26 9.91 22.67 0.22 -0.04 16 22 C -0.15 0.98 6.66 31.12 0.21 1.18 16 23 H 0.05 -0.08 6.62 -2.39 -0.02 -0.10 16 24 H 0.11 -0.53 8.14 -2.39 -0.02 -0.55 16 25 H 0.07 -0.45 6.58 -2.39 -0.02 -0.46 16 26 H 0.13 -0.66 7.03 -2.38 -0.02 -0.67 16 27 H 0.09 0.10 8.14 -2.39 -0.02 0.08 16 28 H 0.42 -4.69 7.21 -92.71 -0.67 -5.36 16 29 H 0.21 -3.07 7.01 -2.91 -0.02 -3.09 16 30 H 0.13 -0.29 7.96 -2.39 -0.02 -0.31 16 31 H 0.39 -1.51 8.70 -74.06 -0.64 -2.15 16 32 H -0.25 0.57 7.11 99.48 0.71 1.27 16 33 H -0.28 -0.88 7.11 99.48 0.71 -0.17 16 34 H 0.13 1.02 8.06 -2.91 -0.02 1.00 16 35 H 0.11 -0.91 6.67 -2.39 -0.02 -0.92 16 36 H 0.13 -1.48 8.04 -2.39 -0.02 -1.50 16 Total: 0.00 -21.04 330.53 0.96 -20.08 By element: Atomic # 1 Polarization: -12.52 SS G_CDS: -0.10 Total: -12.62 kcal Atomic # 6 Polarization: 4.95 SS G_CDS: 3.79 Total: 8.74 kcal Atomic # 7 Polarization: 2.62 SS G_CDS: -2.36 Total: 0.26 kcal Atomic # 8 Polarization: -10.16 SS G_CDS: -3.52 Total: -13.68 kcal Atomic # 9 Polarization: -1.12 SS G_CDS: 2.17 Total: 1.05 kcal Atomic # 14 Polarization: -3.07 SS G_CDS: 2.12 Total: -0.95 kcal Atomic # 16 Polarization: -1.74 SS G_CDS: -1.14 Total: -2.88 kcal Total: -21.04 0.96 -20.08 kcal The number of atoms in the molecule is 36 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16772210_6894386.mol2 36 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -170.212 kcal (2) G-P(sol) polarization free energy of solvation -21.042 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -191.255 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.958 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.085 kcal (6) G-S(sol) free energy of system = (1) + (5) -190.297 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.67 seconds