Wall clock time and date at job start Tue Mar 9 2021 18:29:34 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 C 1.50701 * 1 3 3 C 1.39281 * 121.03243 * 2 1 4 4 C 1.46502 * 134.20068 * 0.02562 * 3 2 1 5 5 C 1.50696 * 126.59842 * 0.02562 * 4 3 2 6 6 O 1.42897 * 109.47114 * 284.99897 * 5 4 3 7 7 Si 1.86300 * 109.46968 * 164.99741 * 5 4 3 8 8 H 1.48502 * 109.47091 * 60.00420 * 7 5 4 9 9 H 1.48500 * 109.46867 * 179.97438 * 7 5 4 10 10 H 1.48492 * 109.47186 * 299.99687 * 7 5 4 11 11 C 1.34181 * 106.80215 * 179.97438 * 4 3 2 12 12 N 1.36946 * 109.95101 * 0.02562 * 11 4 3 13 13 C 1.37159 * 110.11826 * 359.97438 * 12 11 4 14 14 N 1.32823 * 132.96532 * 180.29760 * 13 12 11 15 15 C 1.31313 * 121.88495 * 180.19567 * 14 13 12 16 16 C 1.39757 * 121.02888 * 180.02562 * 2 1 3 17 17 C 1.47657 * 120.45519 * 0.02562 * 16 2 1 18 18 O 1.21581 * 119.99956 * 353.95744 * 17 16 2 19 19 N 1.34777 * 119.99917 * 173.95393 * 17 16 2 20 20 C 1.46497 * 119.99770 * 180.02562 * 19 17 16 21 21 C 1.52522 * 109.04287 * 277.15015 * 20 19 17 22 22 C 1.53712 * 109.64398 * 162.45395 * 21 20 19 23 23 Si 1.87378 * 107.28713 * 59.12349 * 22 21 20 24 24 C 1.86293 * 109.94922 * 195.09786 * 23 22 21 25 25 C 1.86298 * 110.01835 * 73.88302 * 23 22 21 26 26 C 1.87385 * 107.00687 * 314.47434 * 23 22 21 27 27 C 1.52522 * 109.04478 * 154.99954 * 20 19 17 28 28 H 1.08994 * 109.47363 * 263.68117 * 1 2 3 29 29 H 1.09001 * 109.46862 * 23.68403 * 1 2 3 30 30 H 1.09002 * 109.46876 * 143.68158 * 1 2 3 31 31 H 1.08998 * 109.47194 * 44.99789 * 5 4 3 32 32 H 0.96710 * 113.99956 * 300.00132 * 6 5 4 33 33 H 1.08000 * 125.02598 * 180.02562 * 11 4 3 34 34 H 0.97006 * 124.94638 * 179.97438 * 12 11 4 35 35 H 1.07994 * 119.30515 * 179.75537 * 15 14 13 36 36 H 0.97001 * 120.00154 * 359.97438 * 19 17 16 37 37 H 1.09001 * 109.03926 * 36.04170 * 20 19 17 38 38 H 1.09008 * 109.44030 * 282.50206 * 21 20 19 39 39 H 1.08996 * 109.44480 * 42.39678 * 21 20 19 40 40 H 1.09002 * 109.88953 * 299.67937 * 22 21 20 41 41 H 1.09005 * 109.89357 * 178.57019 * 22 21 20 42 42 H 1.09001 * 109.47307 * 177.56043 * 24 23 22 43 43 H 1.09000 * 109.47301 * 297.56102 * 24 23 22 44 44 H 1.09002 * 109.46945 * 57.56571 * 24 23 22 45 45 H 1.09002 * 109.47330 * 302.40393 * 25 23 22 46 46 H 1.09002 * 109.46923 * 62.40131 * 25 23 22 47 47 H 1.09003 * 109.47518 * 182.39668 * 25 23 22 48 48 H 1.08999 * 109.88964 * 286.08310 * 26 23 22 49 49 H 1.08996 * 109.95967 * 165.00690 * 26 23 22 50 50 H 1.08995 * 109.44408 * 317.60231 * 27 20 19 51 51 H 1.09001 * 109.44405 * 77.49385 * 27 20 19 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 6 1.5070 0.0000 0.0000 3 6 2.2250 1.1935 0.0000 4 6 1.8516 2.6101 0.0005 5 6 0.4527 3.1705 0.0017 6 8 -0.1201 3.0241 -1.2992 7 14 0.5076 4.9763 0.4565 8 1 1.3344 5.7114 -0.5341 9 1 -0.8708 5.5286 0.4571 10 1 1.1029 5.1283 1.8084 11 6 2.9949 3.3126 0.0008 12 7 4.0669 2.4604 0.0000 13 6 3.6348 1.1587 -0.0003 14 7 4.2721 -0.0067 0.0040 15 6 3.6267 -1.1502 -0.0013 16 6 2.2274 -1.1976 -0.0005 17 6 1.5225 -2.4950 -0.0017 18 8 0.3122 -2.5294 0.1087 19 7 2.2207 -3.6412 -0.1251 20 6 1.5213 -4.9284 -0.1268 21 6 1.2582 -5.3537 1.3141 22 6 0.1706 -6.4396 1.3419 23 14 0.7929 -7.8774 0.3140 24 6 -0.6153 -9.0297 -0.0853 25 6 2.1220 -8.7962 1.2413 26 6 1.4973 -7.1572 -1.2660 27 6 2.3695 -5.9548 -0.8707 28 1 -0.3634 -0.1131 1.0213 29 1 -0.3633 0.9411 -0.4128 30 1 -0.3633 -0.8281 -0.6087 31 1 -0.1542 2.6310 0.7287 32 1 0.3692 3.4796 -1.9980 33 1 3.0600 4.3906 0.0015 34 1 4.9967 2.7371 -0.0004 35 1 4.1870 -2.0734 -0.0015 36 1 3.1863 -3.6138 -0.2136 37 1 0.5678 -4.8143 -0.6426 38 1 2.1763 -5.7485 1.7492 39 1 0.9250 -4.4916 1.8918 40 1 -0.7533 -6.0502 0.9142 41 1 -0.0027 -6.7647 2.3678 42 1 -0.2537 -9.8395 -0.7191 43 1 -1.0190 -9.4440 0.8385 44 1 -1.3973 -8.4799 -0.6092 45 1 2.9323 -8.1106 1.4893 46 1 1.7042 -9.2117 2.1583 47 1 2.5072 -9.6040 0.6189 48 1 0.6872 -6.8294 -1.9175 49 1 2.1048 -7.9041 -1.7769 50 1 2.7868 -5.4986 -1.7683 51 1 3.1805 -6.2916 -0.2250 RHF calculation, no. of doubly occupied orbitals= 65 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16807780_12890568.mol2 51 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:29:34 Heat of formation + Delta-G solvation = -47.058497 kcal Electronic energy + Delta-G solvation = -30532.272413 eV Core-core repulsion = 26554.990929 eV Total energy + Delta-G solvation = -3977.281484 eV No. of doubly occupied orbitals = 65 Molecular weight (most abundant/longest-lived isotopes) = 361.173 amu Computer time = 0.90 seconds Orbital eigenvalues (eV) -42.81371 -40.96321 -38.90562 -37.93226 -37.56056 -34.91693 -34.00518 -32.04915 -31.90267 -30.92041 -29.27627 -28.74644 -28.45177 -26.87348 -26.17985 -24.48450 -23.78713 -23.49163 -21.60025 -21.44267 -20.63628 -19.24982 -18.70440 -17.80010 -17.52869 -17.04989 -16.67142 -16.34521 -16.18349 -15.88242 -15.73398 -15.47664 -15.17878 -14.97065 -14.81531 -14.40754 -14.12675 -14.01772 -13.89068 -13.77641 -13.69592 -13.49419 -13.38475 -13.32585 -13.25261 -13.16390 -13.11633 -13.05539 -12.75684 -12.50110 -12.42579 -12.20320 -12.13644 -11.82642 -11.75000 -11.02338 -10.98050 -10.82774 -10.55811 -10.37848 -10.24562 -10.13705 -9.91501 -9.54397 -9.11317 -0.17917 -0.01916 1.09910 1.32905 1.39242 1.49123 1.63330 1.74159 1.85828 1.87654 1.88697 2.01468 2.20793 2.61269 2.91110 3.31427 3.45943 3.53123 3.62276 3.75380 3.78450 3.86677 4.08278 4.10907 4.22596 4.26972 4.31710 4.38017 4.50662 4.58108 4.64409 4.71064 4.72130 4.75775 4.76234 4.76699 4.79636 4.81617 4.91886 5.02437 5.09844 5.11369 5.22864 5.23544 5.32581 5.34624 5.44602 5.47646 5.50027 5.54988 5.60194 5.68722 5.82683 6.11652 6.58326 6.58640 6.89060 7.35257 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.134 4.134 2 C 0.086 3.914 3 C -0.148 4.148 4 C -0.178 4.178 5 C -0.051 4.051 6 O -0.536 6.536 7 Si 0.946 3.054 8 H -0.251 1.251 9 H -0.248 1.248 10 H -0.249 1.249 11 C 0.060 3.940 12 N -0.570 5.570 13 C 0.307 3.693 14 N -0.505 5.505 15 C 0.180 3.820 16 C -0.234 4.234 17 C 0.571 3.429 18 O -0.527 6.527 19 N -0.726 5.726 20 C 0.138 3.862 21 C -0.117 4.117 22 C -0.402 4.402 23 Si 0.990 3.010 24 C -0.448 4.448 25 C -0.445 4.445 26 C -0.402 4.402 27 C -0.117 4.117 28 H 0.081 0.919 29 H 0.085 0.915 30 H 0.098 0.902 31 H 0.118 0.882 32 H 0.375 0.625 33 H 0.180 0.820 34 H 0.425 0.575 35 H 0.162 0.838 36 H 0.397 0.603 37 H 0.092 0.908 38 H 0.064 0.936 39 H 0.068 0.932 40 H 0.078 0.922 41 H 0.076 0.924 42 H 0.068 0.932 43 H 0.068 0.932 44 H 0.069 0.931 45 H 0.068 0.932 46 H 0.068 0.932 47 H 0.068 0.932 48 H 0.079 0.921 49 H 0.079 0.921 50 H 0.070 0.930 51 H 0.070 0.930 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.155 0.994 -0.366 3.328 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.190 4.190 2 C 0.078 3.922 3 C -0.155 4.155 4 C -0.186 4.186 5 C -0.162 4.162 6 O -0.341 6.341 7 Si 0.768 3.232 8 H -0.175 1.175 9 H -0.171 1.171 10 H -0.172 1.172 11 C -0.066 4.066 12 N -0.176 5.176 13 C 0.074 3.926 14 N -0.218 5.218 15 C 0.012 3.988 16 C -0.241 4.241 17 C 0.359 3.641 18 O -0.405 6.405 19 N -0.378 5.378 20 C 0.034 3.966 21 C -0.155 4.155 22 C -0.489 4.489 23 Si 1.186 2.814 24 C -0.556 4.556 25 C -0.553 4.553 26 C -0.488 4.488 27 C -0.154 4.154 28 H 0.099 0.901 29 H 0.104 0.896 30 H 0.117 0.883 31 H 0.136 0.864 32 H 0.222 0.778 33 H 0.197 0.803 34 H 0.264 0.736 35 H 0.179 0.821 36 H 0.232 0.768 37 H 0.110 0.890 38 H 0.082 0.918 39 H 0.087 0.913 40 H 0.097 0.903 41 H 0.095 0.905 42 H 0.087 0.913 43 H 0.088 0.912 44 H 0.089 0.911 45 H 0.088 0.912 46 H 0.088 0.912 47 H 0.087 0.913 48 H 0.097 0.903 49 H 0.098 0.902 50 H 0.089 0.911 51 H 0.089 0.911 Dipole moment (debyes) X Y Z Total from point charges 2.894 1.668 0.271 3.351 hybrid contribution 0.830 -0.003 -0.371 0.909 sum 3.723 1.664 -0.100 4.079 Atomic orbital electron populations 1.21284 0.88713 1.05130 1.03863 1.19935 0.97235 0.89078 0.85967 1.19450 0.92734 0.93455 1.09852 1.20665 0.95257 0.91200 1.11502 1.24395 0.90924 1.11491 0.89367 1.86531 1.53667 1.77710 1.16183 0.85786 0.82012 0.74332 0.81108 1.17495 1.17083 1.17243 1.21750 0.85294 0.95875 1.03705 1.41487 1.09520 1.02745 1.63800 1.18498 0.89391 0.85842 0.98867 1.66442 1.40581 0.96005 1.18777 1.22519 0.90163 0.94403 0.91753 1.20480 0.94736 0.93917 1.14957 1.17857 0.86879 0.83235 0.76143 1.90759 1.13480 1.87023 1.49231 1.46049 1.10665 1.05740 1.75340 1.21051 0.97097 0.81817 0.96627 1.21563 0.98818 0.99246 0.95875 1.26230 1.02586 1.10645 1.09409 0.79672 0.67324 0.67069 0.67302 1.26076 1.13686 1.10607 1.05185 1.26092 1.12581 1.08240 1.08410 1.26203 1.04999 1.02398 1.15224 1.21465 0.98240 0.95358 1.00384 0.90051 0.89636 0.88330 0.86383 0.77771 0.80304 0.73647 0.82093 0.76782 0.89029 0.91758 0.91322 0.90283 0.90517 0.91274 0.91232 0.91132 0.91243 0.91246 0.91268 0.90264 0.90172 0.91106 0.91130 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.13 -0.41 8.46 36.01 0.30 -0.11 16 2 C 0.09 0.29 5.98 -103.67 -0.62 -0.33 16 3 C -0.15 -0.41 6.16 -105.13 -0.65 -1.06 16 4 C -0.18 -0.08 5.57 -102.73 -0.57 -0.65 16 5 C -0.05 0.03 1.88 36.00 0.07 0.10 16 6 O -0.54 0.05 11.66 -35.23 -0.41 -0.36 16 7 Si 0.95 -1.68 26.09 -169.99 -4.43 -6.11 16 8 H -0.25 0.61 7.03 56.52 0.40 1.01 16 9 H -0.25 0.00 7.11 56.52 0.40 0.41 16 10 H -0.25 0.26 7.11 56.52 0.40 0.66 16 11 C 0.06 -0.08 10.44 -16.70 -0.17 -0.25 16 12 N -0.57 0.24 6.04 -12.12 -0.07 0.17 16 13 C 0.31 0.79 8.42 -155.70 -1.31 -0.52 16 14 N -0.50 -1.45 10.37 -11.96 -0.12 -1.57 16 15 C 0.18 0.24 10.67 -17.11 -0.18 0.05 16 16 C -0.23 -0.60 5.89 -104.82 -0.62 -1.22 16 17 C 0.57 1.62 7.47 -12.41 -0.09 1.52 16 18 O -0.53 -2.98 13.16 5.29 0.07 -2.91 16 19 N -0.73 0.04 5.00 -55.29 -0.28 -0.24 16 20 C 0.14 -0.01 2.03 -68.42 -0.14 -0.15 16 21 C -0.12 -0.01 5.18 -26.61 -0.14 -0.15 16 22 C -0.40 0.26 4.98 37.53 0.19 0.44 16 23 Si 0.99 -2.47 11.60 -169.99 -1.97 -4.45 16 24 C -0.45 0.53 8.65 101.05 0.87 1.40 16 25 C -0.45 0.75 8.65 101.05 0.87 1.63 16 26 C -0.40 0.80 4.98 37.53 0.19 0.98 16 27 C -0.12 0.21 5.05 -26.60 -0.13 0.08 16 28 H 0.08 0.24 8.14 -51.93 -0.42 -0.19 16 29 H 0.08 0.22 4.79 -51.93 -0.25 -0.03 16 30 H 0.10 0.45 5.95 -51.93 -0.31 0.14 16 31 H 0.12 -0.08 7.13 -51.93 -0.37 -0.45 16 32 H 0.38 -1.26 8.70 45.56 0.40 -0.86 16 33 H 0.18 -0.80 6.30 -52.49 -0.33 -1.13 16 34 H 0.42 -1.27 8.96 -40.82 -0.37 -1.64 16 35 H 0.16 -0.36 6.43 -52.49 -0.34 -0.70 16 36 H 0.40 -1.06 6.66 -40.82 -0.27 -1.33 16 37 H 0.09 0.15 7.34 -51.93 -0.38 -0.23 16 38 H 0.06 -0.08 7.69 -51.92 -0.40 -0.48 16 39 H 0.07 0.16 7.92 -51.93 -0.41 -0.25 16 40 H 0.08 0.02 7.99 -51.93 -0.41 -0.40 16 41 H 0.08 -0.06 7.99 -51.93 -0.41 -0.47 16 42 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 43 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 44 H 0.07 -0.07 7.96 -51.93 -0.41 -0.48 16 45 H 0.07 -0.12 7.96 -51.93 -0.41 -0.54 16 46 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 47 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 48 H 0.08 -0.12 7.99 -51.93 -0.41 -0.54 16 49 H 0.08 -0.19 7.99 -51.93 -0.41 -0.60 16 50 H 0.07 -0.13 8.13 -51.93 -0.42 -0.55 16 51 H 0.07 -0.21 7.69 -51.93 -0.40 -0.61 16 LS Contribution 397.21 15.07 5.99 5.99 Total: 0.00 -8.42 397.21 -10.58 -19.01 By element: Atomic # 1 Polarization: -4.07 SS G_CDS: -7.21 Total: -11.28 kcal Atomic # 6 Polarization: 3.90 SS G_CDS: -2.13 Total: 1.77 kcal Atomic # 7 Polarization: -1.17 SS G_CDS: -0.47 Total: -1.64 kcal Atomic # 8 Polarization: -2.94 SS G_CDS: -0.34 Total: -3.28 kcal Atomic # 14 Polarization: -4.15 SS G_CDS: -6.41 Total: -10.56 kcal Total LS contribution 5.99 Total: 5.99 kcal Total: -8.42 -10.58 -19.01 kcal The number of atoms in the molecule is 51 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_12890568.mol2 51 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -28.053 kcal (2) G-P(sol) polarization free energy of solvation -8.422 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -36.474 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.584 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.006 kcal (6) G-S(sol) free energy of system = (1) + (5) -47.058 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.90 seconds