Wall clock time and date at job start Tue Mar 9 2021 18:47:46 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35992 * 116.99565 * 2 1 4 4 C 1.38670 * 119.99783 * 0.02562 * 3 2 1 5 5 C 1.38154 * 119.99915 * 179.97438 * 4 3 2 6 6 C 1.38681 * 119.99691 * 0.02562 * 5 4 3 7 7 O 1.35986 * 119.99886 * 180.02562 * 6 5 4 8 8 C 1.42905 * 117.00016 * 0.02562 * 7 6 5 9 9 C 1.50700 * 109.47021 * 179.97438 * 8 7 6 10 10 O 1.21282 * 119.99684 * 0.02562 * 9 8 7 11 11 N 1.34778 * 119.99976 * 179.97438 * 9 8 7 12 12 C 1.46497 * 119.99835 * 180.02562 * 11 9 8 13 13 C 1.52533 * 109.03956 * 277.14965 * 12 11 9 14 14 C 1.53712 * 109.64095 * 162.45406 * 13 12 11 15 15 Si 1.87382 * 107.28490 * 59.12159 * 14 13 12 16 16 C 1.86302 * 109.94901 * 195.09840 * 15 14 13 17 17 C 1.86303 * 109.94531 * 73.84563 * 15 14 13 18 18 C 1.87387 * 107.00842 * 314.47414 * 15 14 13 19 19 C 1.52526 * 109.04206 * 155.00250 * 12 11 9 20 20 C 1.38712 * 120.00083 * 0.02562 * 6 5 4 21 21 C 1.50701 * 119.99957 * 179.97438 * 20 6 5 22 22 O 1.42895 * 109.47079 * 75.00898 * 21 20 6 23 23 Si 1.86301 * 109.47149 * 195.00393 * 21 20 6 24 24 H 1.48506 * 109.47302 * 59.99966 * 23 21 20 25 25 H 1.48503 * 109.47334 * 300.00099 * 23 21 20 26 26 H 1.48500 * 109.47376 * 180.02562 * 23 21 20 27 27 C 1.38110 * 119.99936 * 0.24058 * 20 6 5 28 28 H 1.08997 * 109.46779 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.46818 * 299.99390 * 1 2 3 30 30 H 1.08993 * 109.47435 * 59.99660 * 1 2 3 31 31 H 1.07996 * 120.00591 * 359.97438 * 4 3 2 32 32 H 1.08000 * 120.00545 * 179.97438 * 5 4 3 33 33 H 1.08999 * 109.47003 * 300.00171 * 8 7 6 34 34 H 1.09004 * 109.46705 * 60.00512 * 8 7 6 35 35 H 0.96998 * 119.99988 * 0.02562 * 11 9 8 36 36 H 1.08996 * 109.03762 * 36.03945 * 12 11 9 37 37 H 1.09001 * 109.43727 * 282.49911 * 13 12 11 38 38 H 1.08998 * 109.43998 * 42.40076 * 13 12 11 39 39 H 1.09000 * 109.89381 * 299.68093 * 14 13 12 40 40 H 1.08998 * 109.89580 * 178.56785 * 14 13 12 41 41 H 1.08998 * 109.46939 * 177.56418 * 16 15 14 42 42 H 1.09005 * 109.46590 * 297.56521 * 16 15 14 43 43 H 1.09002 * 109.46769 * 57.56046 * 16 15 14 44 44 H 1.09000 * 109.47015 * 302.43732 * 17 15 14 45 45 H 1.08997 * 109.46925 * 62.43733 * 17 15 14 46 46 H 1.08995 * 109.46948 * 182.43555 * 17 15 14 47 47 H 1.09006 * 109.88941 * 286.08501 * 18 15 14 48 48 H 1.09000 * 109.89282 * 164.97483 * 18 15 14 49 49 H 1.08999 * 109.43957 * 317.59459 * 19 12 11 50 50 H 1.08993 * 109.44277 * 77.49501 * 19 12 11 51 51 H 1.09001 * 109.47380 * 315.00295 * 21 20 6 52 52 H 0.96708 * 113.99763 * 299.99687 * 22 21 20 53 53 H 1.08008 * 119.99731 * 179.72155 * 27 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 1.2909 2.3746 0.0005 5 6 1.9180 3.6057 0.0011 6 6 3.3029 3.6783 0.0005 7 8 3.9202 4.8900 0.0016 8 6 3.0802 6.0461 0.0038 9 6 3.9343 7.2876 0.0053 10 8 5.1433 7.1918 0.0041 11 7 3.3546 8.5044 0.0070 12 6 4.1850 9.7113 0.0079 13 6 4.6156 10.0179 1.4387 14 6 5.8114 10.9836 1.4226 15 14 5.2599 12.5379 0.5331 16 6 6.7435 13.5633 0.0660 17 6 4.1211 13.5262 1.6272 18 6 4.3486 11.9919 -1.0106 19 6 3.3902 10.8626 -0.5997 20 6 4.0585 2.5150 -0.0011 21 6 5.5634 2.5940 -0.0022 22 8 6.0219 2.9658 1.2991 23 14 6.2721 0.9327 -0.4590 24 1 5.7957 0.5460 -1.8113 25 1 5.8305 -0.0829 0.5304 26 1 7.7551 1.0103 -0.4595 27 6 3.4315 1.2844 -0.0072 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5137 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 0.2125 2.3181 0.0005 32 1 1.3298 4.5114 0.0011 33 1 2.4502 6.0391 -0.8856 34 1 2.4517 6.0368 0.8944 35 1 2.3877 8.5809 0.0076 36 1 5.0726 9.5326 -0.5990 37 1 3.7860 10.4766 1.9768 38 1 4.9034 9.0923 1.9372 39 1 6.6479 10.5294 0.8916 40 1 6.1065 11.2256 2.4436 41 1 6.4171 14.4432 -0.4884 42 1 7.2675 13.8766 0.9691 43 1 7.4140 12.9700 -0.5558 44 1 3.2674 12.9115 1.9127 45 1 4.6586 13.8397 2.5221 46 1 3.7710 14.4057 1.0870 47 1 5.0597 11.6241 -1.7504 48 1 3.7825 12.8275 -1.4222 49 1 2.8505 10.5074 -1.4776 50 1 2.6788 11.2398 0.1349 51 1 5.8876 3.3394 -0.7285 52 1 5.6914 3.8225 1.6026 53 1 4.0199 0.3787 -0.0130 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16807780_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:47:46 Heat of formation + Delta-G solvation = -163.092431 kcal Electronic energy + Delta-G solvation = -31327.754266 eV Core-core repulsion = 27095.380892 eV Total energy + Delta-G solvation = -4232.373374 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -41.81422 -40.98093 -39.92442 -38.25210 -37.61817 -36.79619 -34.11741 -32.77099 -32.14600 -31.07740 -29.70761 -29.20950 -28.51213 -28.09844 -26.48496 -26.37282 -23.73475 -23.58659 -22.37171 -21.62317 -21.49638 -19.53047 -18.79935 -18.48638 -17.89962 -17.51097 -17.38276 -17.16003 -16.68760 -16.25333 -16.15961 -15.76519 -15.52801 -15.48573 -15.30127 -14.99272 -14.74387 -14.20847 -14.15857 -14.05015 -14.02640 -13.88410 -13.65079 -13.52080 -13.44396 -13.41957 -13.31880 -13.18296 -13.09310 -13.02758 -12.69757 -12.56314 -12.28849 -12.23962 -12.07268 -11.87245 -11.61385 -11.49802 -11.09504 -10.94794 -10.88057 -10.84223 -10.55331 -10.36653 -10.08005 -10.05128 -8.79680 0.09332 0.37348 1.35444 1.42174 1.49679 1.66163 1.66725 1.71391 1.79049 1.83068 2.12989 2.27474 2.51482 2.56448 2.58791 3.42302 3.56832 3.63729 3.69393 3.78035 3.84071 3.97596 3.98025 4.08905 4.10195 4.13802 4.15196 4.17925 4.27578 4.35389 4.40673 4.48988 4.53629 4.54711 4.66029 4.66536 4.67172 4.69719 4.71483 4.72557 4.79893 4.99878 5.06270 5.11819 5.13920 5.20021 5.20784 5.25053 5.35523 5.39787 5.42587 5.49595 5.52313 6.10405 6.34179 6.41261 6.77424 7.10358 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.026 3.974 2 O -0.315 6.315 3 C 0.103 3.897 4 C -0.165 4.165 5 C -0.165 4.165 6 C 0.103 3.897 7 O -0.289 6.289 8 C 0.040 3.960 9 C 0.515 3.485 10 O -0.509 6.509 11 N -0.725 5.725 12 C 0.138 3.862 13 C -0.117 4.117 14 C -0.404 4.404 15 Si 0.991 3.009 16 C -0.448 4.448 17 C -0.446 4.446 18 C -0.403 4.403 19 C -0.115 4.115 20 C -0.098 4.098 21 C -0.084 4.084 22 O -0.535 6.535 23 Si 1.014 2.986 24 H -0.248 1.248 25 H -0.251 1.251 26 H -0.255 1.255 27 C -0.116 4.116 28 H 0.102 0.898 29 H 0.056 0.944 30 H 0.056 0.944 31 H 0.135 0.865 32 H 0.134 0.866 33 H 0.093 0.907 34 H 0.093 0.907 35 H 0.401 0.599 36 H 0.092 0.908 37 H 0.065 0.935 38 H 0.068 0.932 39 H 0.079 0.921 40 H 0.077 0.923 41 H 0.068 0.932 42 H 0.069 0.931 43 H 0.070 0.930 44 H 0.068 0.932 45 H 0.069 0.931 46 H 0.068 0.932 47 H 0.079 0.921 48 H 0.081 0.919 49 H 0.070 0.930 50 H 0.071 0.929 51 H 0.082 0.918 52 H 0.371 0.629 53 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -7.047 3.906 -0.937 8.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.069 4.069 2 O -0.229 6.229 3 C 0.058 3.942 4 C -0.184 4.184 5 C -0.184 4.184 6 C 0.058 3.942 7 O -0.201 6.201 8 C -0.039 4.039 9 C 0.299 3.701 10 O -0.383 6.383 11 N -0.379 5.379 12 C 0.035 3.965 13 C -0.155 4.155 14 C -0.490 4.490 15 Si 1.188 2.812 16 C -0.556 4.556 17 C -0.553 4.553 18 C -0.489 4.489 19 C -0.153 4.153 20 C -0.099 4.099 21 C -0.192 4.192 22 O -0.341 6.341 23 Si 0.834 3.166 24 H -0.171 1.171 25 H -0.175 1.175 26 H -0.179 1.179 27 C -0.134 4.134 28 H 0.121 0.879 29 H 0.074 0.926 30 H 0.074 0.926 31 H 0.153 0.847 32 H 0.151 0.849 33 H 0.111 0.889 34 H 0.111 0.889 35 H 0.235 0.765 36 H 0.110 0.890 37 H 0.083 0.917 38 H 0.086 0.914 39 H 0.097 0.903 40 H 0.096 0.904 41 H 0.088 0.912 42 H 0.088 0.912 43 H 0.089 0.911 44 H 0.087 0.913 45 H 0.088 0.912 46 H 0.088 0.912 47 H 0.098 0.902 48 H 0.099 0.901 49 H 0.089 0.911 50 H 0.089 0.911 51 H 0.100 0.900 52 H 0.219 0.781 53 H 0.159 0.841 Dipole moment (debyes) X Y Z Total from point charges -5.221 2.308 -1.206 5.834 hybrid contribution -1.838 1.377 0.205 2.306 sum -7.059 3.685 -1.001 8.026 Atomic orbital electron populations 1.23097 0.78066 1.04362 1.01340 1.86115 1.21562 1.26310 1.88923 1.18795 0.91890 0.84551 0.98928 1.21073 1.00294 0.91507 1.05488 1.21023 0.92876 0.98638 1.05860 1.18625 0.90754 0.84597 1.00260 1.86118 1.33830 1.11002 1.89200 1.22476 0.93243 0.84219 1.03939 1.20005 0.88872 0.84184 0.76997 1.90790 1.14033 1.86498 1.46955 1.45980 1.10507 1.05154 1.76241 1.21099 0.94707 0.83235 0.97507 1.21565 0.97991 1.00311 0.95668 1.26242 1.01301 1.12983 1.08466 0.79658 0.67286 0.67102 0.67196 1.26075 1.14654 1.09328 1.05527 1.26090 1.10378 1.08856 1.10004 1.26209 1.06061 1.01844 1.14800 1.21455 0.98242 0.94626 1.01004 1.19429 0.96708 0.89928 1.03849 1.25237 0.91356 1.13417 0.89237 1.86668 1.73726 1.42163 1.31558 0.84486 0.79694 0.72846 0.79621 1.17134 1.17474 1.17877 1.20225 0.92023 0.97383 1.03809 0.87918 0.92560 0.92552 0.84725 0.84867 0.88915 0.88876 0.76525 0.89005 0.91657 0.91358 0.90251 0.90377 0.91236 0.91176 0.91111 0.91283 0.91183 0.91232 0.90220 0.90065 0.91121 0.91063 0.90035 0.78087 0.84105 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.03 -0.04 9.81 101.05 0.99 0.95 16 2 O -0.32 -0.69 10.50 -19.71 -0.21 -0.90 16 3 C 0.10 0.24 6.69 -39.25 -0.26 -0.02 16 4 C -0.16 -0.06 9.03 -39.45 -0.36 -0.42 16 5 C -0.17 0.00 9.03 -39.45 -0.36 -0.35 16 6 C 0.10 0.19 6.62 -39.24 -0.26 -0.07 16 7 O -0.29 -0.57 8.56 -39.61 -0.34 -0.91 16 8 C 0.04 -0.06 5.22 36.01 0.19 0.13 16 9 C 0.52 0.41 7.66 -10.98 -0.08 0.32 16 10 O -0.51 -2.80 16.17 -14.36 -0.23 -3.03 16 11 N -0.73 1.46 5.05 -54.28 -0.27 1.18 16 12 C 0.14 -0.16 2.03 -68.41 -0.14 -0.30 16 13 C -0.12 0.09 5.18 -26.60 -0.14 -0.05 16 14 C -0.40 0.47 4.98 37.53 0.19 0.66 16 15 Si 0.99 -3.06 11.59 -169.99 -1.97 -5.03 16 16 C -0.45 0.72 8.65 101.05 0.87 1.59 16 17 C -0.45 1.02 8.65 101.05 0.87 1.90 16 18 C -0.40 1.09 4.98 37.53 0.19 1.28 16 19 C -0.12 0.33 5.05 -26.60 -0.13 0.20 16 20 C -0.10 -0.28 5.28 -104.49 -0.55 -0.84 16 21 C -0.08 -0.25 2.33 36.01 0.08 -0.17 16 22 O -0.54 -2.16 12.65 -35.23 -0.45 -2.60 16 23 Si 1.01 2.33 25.73 -169.99 -4.37 -2.05 16 24 H -0.25 -0.43 7.11 56.52 0.40 -0.03 16 25 H -0.25 -0.69 6.74 56.52 0.38 -0.31 16 26 H -0.25 -0.82 7.11 56.52 0.40 -0.42 16 27 C -0.12 -0.34 8.59 -39.45 -0.34 -0.68 16 28 H 0.10 -0.32 8.14 -51.93 -0.42 -0.74 16 29 H 0.06 -0.15 7.66 -51.93 -0.40 -0.54 16 30 H 0.06 -0.15 7.66 -51.93 -0.40 -0.55 16 31 H 0.13 -0.27 6.29 -52.49 -0.33 -0.60 16 32 H 0.13 -0.40 6.29 -52.49 -0.33 -0.73 16 33 H 0.09 -0.35 7.66 -51.93 -0.40 -0.75 16 34 H 0.09 -0.36 7.66 -51.93 -0.40 -0.76 16 35 H 0.40 -2.09 8.58 -40.82 -0.35 -2.44 16 36 H 0.09 0.08 7.34 -51.93 -0.38 -0.30 16 37 H 0.06 -0.14 7.69 -51.93 -0.40 -0.54 16 38 H 0.07 0.10 7.92 -51.93 -0.41 -0.31 16 39 H 0.08 -0.01 7.99 -51.93 -0.41 -0.43 16 40 H 0.08 -0.10 7.99 -51.93 -0.41 -0.51 16 41 H 0.07 -0.11 7.96 -51.93 -0.41 -0.53 16 42 H 0.07 -0.10 7.96 -51.93 -0.41 -0.51 16 43 H 0.07 -0.09 7.96 -51.93 -0.41 -0.50 16 44 H 0.07 -0.17 7.96 -51.93 -0.41 -0.58 16 45 H 0.07 -0.13 7.96 -51.93 -0.41 -0.55 16 46 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 47 H 0.08 -0.17 7.99 -51.93 -0.41 -0.59 16 48 H 0.08 -0.25 7.99 -51.93 -0.41 -0.66 16 49 H 0.07 -0.21 8.13 -51.93 -0.42 -0.63 16 50 H 0.07 -0.29 7.69 -51.93 -0.40 -0.68 16 51 H 0.08 0.21 7.82 -51.93 -0.41 -0.19 16 52 H 0.37 0.91 8.60 45.56 0.39 1.30 16 53 H 0.14 0.34 4.88 -52.48 -0.26 0.08 16 LS Contribution 420.77 15.07 6.34 6.34 Total: 0.00 -8.43 420.77 -9.00 -17.44 By element: Atomic # 1 Polarization: -6.32 SS G_CDS: -8.27 Total: -14.59 kcal Atomic # 6 Polarization: 3.37 SS G_CDS: 0.76 Total: 4.14 kcal Atomic # 7 Polarization: 1.46 SS G_CDS: -0.27 Total: 1.18 kcal Atomic # 8 Polarization: -6.21 SS G_CDS: -1.22 Total: -7.44 kcal Atomic # 14 Polarization: -0.73 SS G_CDS: -6.35 Total: -7.08 kcal Total LS contribution 6.34 Total: 6.34 kcal Total: -8.43 -9.00 -17.44 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -145.654 kcal (2) G-P(sol) polarization free energy of solvation -8.435 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -154.089 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.003 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -17.438 kcal (6) G-S(sol) free energy of system = (1) + (5) -163.092 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds