Wall clock time and date at job start Tue Mar 9 2021 18:47:45 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35992 * 116.99565 * 2 1 4 4 C 1.38670 * 119.99783 * 0.02562 * 3 2 1 5 5 C 1.38154 * 119.99915 * 179.97438 * 4 3 2 6 6 C 1.38681 * 119.99691 * 0.02562 * 5 4 3 7 7 O 1.35986 * 119.99886 * 180.02562 * 6 5 4 8 8 C 1.42905 * 117.00016 * 0.02562 * 7 6 5 9 9 C 1.50700 * 109.47021 * 179.97438 * 8 7 6 10 10 O 1.21282 * 119.99684 * 0.02562 * 9 8 7 11 11 N 1.34778 * 119.99976 * 179.97438 * 9 8 7 12 12 C 1.46497 * 119.99835 * 180.02562 * 11 9 8 13 13 C 1.52533 * 109.03956 * 277.14965 * 12 11 9 14 14 C 1.53712 * 109.64095 * 162.45406 * 13 12 11 15 15 Si 1.87382 * 107.28490 * 59.12159 * 14 13 12 16 16 C 1.86302 * 109.94901 * 195.09840 * 15 14 13 17 17 C 1.86303 * 109.94531 * 73.84563 * 15 14 13 18 18 C 1.87387 * 107.00842 * 314.47414 * 15 14 13 19 19 C 1.52526 * 109.04206 * 155.00250 * 12 11 9 20 20 C 1.38712 * 120.00083 * 0.02562 * 6 5 4 21 21 C 1.50701 * 119.99957 * 179.97438 * 20 6 5 22 22 O 1.42895 * 109.47079 * 75.00898 * 21 20 6 23 23 Si 1.86301 * 109.47149 * 195.00393 * 21 20 6 24 24 H 1.48506 * 109.47302 * 59.99966 * 23 21 20 25 25 H 1.48503 * 109.47334 * 300.00099 * 23 21 20 26 26 H 1.48500 * 109.47376 * 180.02562 * 23 21 20 27 27 C 1.38110 * 119.99936 * 0.24058 * 20 6 5 28 28 H 1.08997 * 109.46779 * 180.02562 * 1 2 3 29 29 H 1.08998 * 109.46818 * 299.99390 * 1 2 3 30 30 H 1.08993 * 109.47435 * 59.99660 * 1 2 3 31 31 H 1.07996 * 120.00591 * 359.97438 * 4 3 2 32 32 H 1.08000 * 120.00545 * 179.97438 * 5 4 3 33 33 H 1.08999 * 109.47003 * 300.00171 * 8 7 6 34 34 H 1.09004 * 109.46705 * 60.00512 * 8 7 6 35 35 H 0.96998 * 119.99988 * 0.02562 * 11 9 8 36 36 H 1.08996 * 109.03762 * 36.03945 * 12 11 9 37 37 H 1.09001 * 109.43727 * 282.49911 * 13 12 11 38 38 H 1.08998 * 109.43998 * 42.40076 * 13 12 11 39 39 H 1.09000 * 109.89381 * 299.68093 * 14 13 12 40 40 H 1.08998 * 109.89580 * 178.56785 * 14 13 12 41 41 H 1.08998 * 109.46939 * 177.56418 * 16 15 14 42 42 H 1.09005 * 109.46590 * 297.56521 * 16 15 14 43 43 H 1.09002 * 109.46769 * 57.56046 * 16 15 14 44 44 H 1.09000 * 109.47015 * 302.43732 * 17 15 14 45 45 H 1.08997 * 109.46925 * 62.43733 * 17 15 14 46 46 H 1.08995 * 109.46948 * 182.43555 * 17 15 14 47 47 H 1.09006 * 109.88941 * 286.08501 * 18 15 14 48 48 H 1.09000 * 109.89282 * 164.97483 * 18 15 14 49 49 H 1.08999 * 109.43957 * 317.59459 * 19 12 11 50 50 H 1.08993 * 109.44277 * 77.49501 * 19 12 11 51 51 H 1.09001 * 109.47380 * 315.00295 * 21 20 6 52 52 H 0.96708 * 113.99763 * 299.99687 * 22 21 20 53 53 H 1.08008 * 119.99731 * 179.72155 * 27 20 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 1.2909 2.3746 0.0005 5 6 1.9180 3.6057 0.0011 6 6 3.3029 3.6783 0.0005 7 8 3.9202 4.8900 0.0016 8 6 3.0802 6.0461 0.0038 9 6 3.9343 7.2876 0.0053 10 8 5.1433 7.1918 0.0041 11 7 3.3546 8.5044 0.0070 12 6 4.1850 9.7113 0.0079 13 6 4.6156 10.0179 1.4387 14 6 5.8114 10.9836 1.4226 15 14 5.2599 12.5379 0.5331 16 6 6.7435 13.5633 0.0660 17 6 4.1211 13.5262 1.6272 18 6 4.3486 11.9919 -1.0106 19 6 3.3902 10.8626 -0.5997 20 6 4.0585 2.5150 -0.0011 21 6 5.5634 2.5940 -0.0022 22 8 6.0219 2.9658 1.2991 23 14 6.2721 0.9327 -0.4590 24 1 5.7957 0.5460 -1.8113 25 1 5.8305 -0.0829 0.5304 26 1 7.7551 1.0103 -0.4595 27 6 3.4315 1.2844 -0.0072 28 1 -0.3633 -1.0277 0.0005 29 1 -0.3633 0.5137 0.8900 30 1 -0.3634 0.5138 -0.8899 31 1 0.2125 2.3181 0.0005 32 1 1.3298 4.5114 0.0011 33 1 2.4502 6.0391 -0.8856 34 1 2.4517 6.0368 0.8944 35 1 2.3877 8.5809 0.0076 36 1 5.0726 9.5326 -0.5990 37 1 3.7860 10.4766 1.9768 38 1 4.9034 9.0923 1.9372 39 1 6.6479 10.5294 0.8916 40 1 6.1065 11.2256 2.4436 41 1 6.4171 14.4432 -0.4884 42 1 7.2675 13.8766 0.9691 43 1 7.4140 12.9700 -0.5558 44 1 3.2674 12.9115 1.9127 45 1 4.6586 13.8397 2.5221 46 1 3.7710 14.4057 1.0870 47 1 5.0597 11.6241 -1.7504 48 1 3.7825 12.8275 -1.4222 49 1 2.8505 10.5074 -1.4776 50 1 2.6788 11.2398 0.1349 51 1 5.8876 3.3394 -0.7285 52 1 5.6914 3.8225 1.6026 53 1 4.0199 0.3787 -0.0130 RHF calculation, no. of doubly occupied orbitals= 67 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16807780_4974302.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:47:45 Heat of formation + Delta-G solvation = -159.915656 kcal Electronic energy + Delta-G solvation = -31327.616511 eV Core-core repulsion = 27095.380892 eV Total energy + Delta-G solvation = -4232.235619 eV No. of doubly occupied orbitals = 67 Molecular weight (most abundant/longest-lived isotopes) = 367.182 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -41.84251 -41.00341 -39.93834 -38.31586 -37.69218 -36.92278 -34.09705 -32.83928 -31.99503 -31.06467 -29.63698 -29.06273 -28.32796 -28.00978 -26.60595 -26.26903 -23.76300 -23.45767 -22.42611 -21.52770 -21.49077 -19.56424 -18.83097 -18.48533 -18.06045 -17.48966 -17.42758 -17.12343 -16.65258 -16.30563 -16.10526 -15.76811 -15.62887 -15.49072 -15.36871 -14.95019 -14.82205 -14.28798 -14.11057 -14.00005 -13.90248 -13.73030 -13.60002 -13.46107 -13.34475 -13.28891 -13.15078 -13.07218 -13.04449 -12.91014 -12.55775 -12.45842 -12.29579 -12.27125 -12.12540 -11.83765 -11.73322 -11.45797 -11.24965 -11.11968 -10.97573 -10.71502 -10.40792 -10.28523 -10.12308 -9.99910 -8.84159 0.03717 0.31250 1.14102 1.43358 1.47875 1.48437 1.49880 1.86331 1.89859 1.98361 2.05350 2.31853 2.52503 2.60667 2.70593 3.48891 3.56147 3.71365 3.79608 3.86630 3.96642 4.04320 4.07299 4.12769 4.13938 4.21077 4.23428 4.32897 4.40204 4.40764 4.42141 4.55884 4.66635 4.68116 4.75335 4.80364 4.81829 4.85323 4.88391 4.89343 4.91898 4.96853 5.10472 5.18017 5.18581 5.25890 5.28685 5.38295 5.39822 5.49368 5.52485 5.61067 5.71188 6.13845 6.40063 6.50931 6.54982 7.18098 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.339 6.339 3 C 0.089 3.911 4 C -0.160 4.160 5 C -0.157 4.157 6 C 0.096 3.904 7 O -0.312 6.312 8 C 0.037 3.963 9 C 0.510 3.490 10 O -0.568 6.568 11 N -0.709 5.709 12 C 0.137 3.863 13 C -0.116 4.116 14 C -0.424 4.424 15 Si 1.061 2.939 16 C -0.468 4.468 17 C -0.453 4.453 18 C -0.410 4.410 19 C -0.112 4.112 20 C -0.116 4.116 21 C -0.088 4.088 22 O -0.550 6.550 23 Si 1.035 2.965 24 H -0.239 1.239 25 H -0.261 1.261 26 H -0.271 1.271 27 C -0.137 4.137 28 H 0.113 0.887 29 H 0.067 0.933 30 H 0.069 0.931 31 H 0.163 0.837 32 H 0.170 0.830 33 H 0.124 0.876 34 H 0.125 0.875 35 H 0.420 0.580 36 H 0.064 0.936 37 H 0.086 0.914 38 H 0.038 0.962 39 H 0.059 0.941 40 H 0.075 0.925 41 H 0.072 0.928 42 H 0.065 0.935 43 H 0.062 0.938 44 H 0.076 0.924 45 H 0.065 0.935 46 H 0.073 0.927 47 H 0.071 0.929 48 H 0.093 0.907 49 H 0.077 0.923 50 H 0.093 0.907 51 H 0.078 0.922 52 H 0.375 0.625 53 H 0.135 0.865 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -10.476 5.261 -1.214 11.785 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.253 6.253 3 C 0.044 3.956 4 C -0.178 4.178 5 C -0.176 4.176 6 C 0.051 3.949 7 O -0.226 6.226 8 C -0.041 4.041 9 C 0.296 3.704 10 O -0.446 6.446 11 N -0.362 5.362 12 C 0.033 3.967 13 C -0.154 4.154 14 C -0.508 4.508 15 Si 1.253 2.747 16 C -0.574 4.574 17 C -0.561 4.561 18 C -0.497 4.497 19 C -0.150 4.150 20 C -0.118 4.118 21 C -0.196 4.196 22 O -0.356 6.356 23 Si 0.856 3.144 24 H -0.162 1.162 25 H -0.185 1.185 26 H -0.196 1.196 27 C -0.156 4.156 28 H 0.132 0.868 29 H 0.086 0.914 30 H 0.088 0.912 31 H 0.180 0.820 32 H 0.188 0.812 33 H 0.142 0.858 34 H 0.142 0.858 35 H 0.258 0.742 36 H 0.082 0.918 37 H 0.105 0.895 38 H 0.057 0.943 39 H 0.078 0.922 40 H 0.094 0.906 41 H 0.091 0.909 42 H 0.084 0.916 43 H 0.082 0.918 44 H 0.095 0.905 45 H 0.084 0.916 46 H 0.092 0.908 47 H 0.090 0.910 48 H 0.112 0.888 49 H 0.096 0.904 50 H 0.111 0.889 51 H 0.096 0.904 52 H 0.223 0.777 53 H 0.153 0.847 Dipole moment (debyes) X Y Z Total from point charges -8.689 3.674 -1.482 9.549 hybrid contribution -0.771 0.981 0.317 1.287 sum -9.459 4.655 -1.165 10.607 Atomic orbital electron populations 1.23361 0.76234 1.05595 1.02501 1.86082 1.23591 1.26623 1.89031 1.18974 0.91846 0.85428 0.99381 1.21407 1.01579 0.90822 1.04040 1.21407 0.92137 0.99953 1.04060 1.18722 0.91600 0.84228 1.00360 1.86094 1.35406 1.11765 1.89321 1.22742 0.92676 0.81896 1.06785 1.20540 0.88408 0.85531 0.75901 1.90771 1.16624 1.87348 1.49896 1.45858 1.11502 1.04197 1.74689 1.21076 0.94457 0.84296 0.96871 1.21562 0.98754 0.99168 0.95931 1.26549 1.00828 1.14720 1.08684 0.78617 0.65651 0.64425 0.66051 1.26331 1.15781 1.09947 1.05371 1.26163 1.10723 1.09224 1.09956 1.26281 1.06290 1.02345 1.14746 1.21463 0.98169 0.93592 1.01727 1.19418 0.96401 0.90704 1.05232 1.25296 0.92272 1.13452 0.88578 1.86633 1.74153 1.42524 1.32303 0.84210 0.78216 0.72295 0.79723 1.16174 1.18529 1.19593 1.20280 0.92865 0.97255 1.05165 0.86847 0.91403 0.91243 0.81997 0.81229 0.85837 0.85790 0.74214 0.91787 0.89532 0.94296 0.92193 0.90637 0.90877 0.91574 0.91844 0.90484 0.91573 0.90778 0.91030 0.88817 0.90396 0.88889 0.90390 0.77661 0.84742 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.04 16 2 O -0.34 -1.52 10.50 -93.46 -0.98 -2.50 16 3 C 0.09 0.42 6.69 22.49 0.15 0.57 16 4 C -0.16 0.16 9.03 22.35 0.20 0.36 16 5 C -0.16 0.33 9.03 22.36 0.20 0.54 16 6 C 0.10 0.35 6.62 22.49 0.15 0.50 16 7 O -0.31 -1.32 8.56 -74.35 -0.64 -1.96 16 8 C 0.04 -0.16 5.22 71.24 0.37 0.21 16 9 C 0.51 1.00 7.66 87.66 0.67 1.67 16 10 O -0.57 -7.66 16.17 16.00 0.26 -7.40 16 11 N -0.71 3.29 5.05 -444.03 -2.24 1.05 16 12 C 0.14 -0.28 2.03 44.68 0.09 -0.19 16 13 C -0.12 0.09 5.18 30.68 0.16 0.25 16 14 C -0.42 0.34 4.98 72.22 0.36 0.70 16 15 Si 1.06 -6.72 11.59 68.60 0.80 -5.92 16 16 C -0.47 1.18 8.65 113.37 0.98 2.16 16 17 C -0.45 2.75 8.65 113.37 0.98 3.73 16 18 C -0.41 2.61 4.98 72.22 0.36 2.97 16 19 C -0.11 0.82 5.05 30.68 0.15 0.97 16 20 C -0.12 -0.83 5.28 -19.78 -0.10 -0.93 16 21 C -0.09 -0.72 2.33 71.24 0.17 -0.56 16 22 O -0.55 -5.81 12.65 -148.98 -1.89 -7.70 16 23 Si 1.04 6.96 25.73 68.60 1.77 8.72 16 24 H -0.24 -1.16 7.11 99.48 0.71 -0.45 16 25 H -0.26 -2.08 6.74 99.48 0.67 -1.41 16 26 H -0.27 -2.40 7.11 99.48 0.71 -1.69 16 27 C -0.14 -1.00 8.59 22.35 0.19 -0.81 16 28 H 0.11 -0.80 8.14 -2.39 -0.02 -0.82 16 29 H 0.07 -0.47 7.66 -2.39 -0.02 -0.49 16 30 H 0.07 -0.50 7.66 -2.39 -0.02 -0.52 16 31 H 0.16 -1.15 6.29 -2.91 -0.02 -1.17 16 32 H 0.17 -1.73 6.29 -2.91 -0.02 -1.75 16 33 H 0.12 -1.30 7.66 -2.39 -0.02 -1.32 16 34 H 0.12 -1.32 7.66 -2.38 -0.02 -1.33 16 35 H 0.42 -5.34 8.58 -92.71 -0.80 -6.13 16 36 H 0.06 0.25 7.34 -2.39 -0.02 0.23 16 37 H 0.09 -0.46 7.69 -2.39 -0.02 -0.48 16 38 H 0.04 0.20 7.92 -2.39 -0.02 0.18 16 39 H 0.06 0.17 7.99 -2.39 -0.02 0.15 16 40 H 0.07 -0.06 7.99 -2.39 -0.02 -0.08 16 41 H 0.07 -0.24 7.96 -2.39 -0.02 -0.26 16 42 H 0.07 -0.12 7.96 -2.38 -0.02 -0.14 16 43 H 0.06 -0.07 7.96 -2.39 -0.02 -0.09 16 44 H 0.08 -0.56 7.96 -2.39 -0.02 -0.58 16 45 H 0.07 -0.32 7.96 -2.39 -0.02 -0.33 16 46 H 0.07 -0.47 7.96 -2.39 -0.02 -0.49 16 47 H 0.07 -0.31 7.99 -2.38 -0.02 -0.32 16 48 H 0.09 -0.77 7.99 -2.39 -0.02 -0.79 16 49 H 0.08 -0.64 8.13 -2.39 -0.02 -0.66 16 50 H 0.09 -1.04 7.69 -2.39 -0.02 -1.06 16 51 H 0.08 0.62 7.82 -2.39 -0.02 0.61 16 52 H 0.37 2.86 8.60 -74.05 -0.64 2.23 16 53 H 0.14 0.96 4.88 -2.91 -0.01 0.94 16 Total: 0.00 -24.03 420.77 3.48 -20.55 By element: Atomic # 1 Polarization: -18.23 SS G_CDS: 0.21 Total: -18.02 kcal Atomic # 6 Polarization: 6.98 SS G_CDS: 6.20 Total: 13.18 kcal Atomic # 7 Polarization: 3.29 SS G_CDS: -2.24 Total: 1.05 kcal Atomic # 8 Polarization: -16.32 SS G_CDS: -3.24 Total: -19.56 kcal Atomic # 14 Polarization: 0.24 SS G_CDS: 2.56 Total: 2.80 kcal Total: -24.03 3.48 -20.55 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_4974302.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -139.369 kcal (2) G-P(sol) polarization free energy of solvation -24.027 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -163.396 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 3.480 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.547 kcal (6) G-S(sol) free energy of system = (1) + (5) -159.916 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds