Wall clock time and date at job start Tue Mar 9 2021 18:54:35 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 Si 1.86307 * 1 3 3 C 1.86304 * 110.00253 * 2 1 4 4 C 1.87380 * 109.94544 * 121.21857 * 2 1 3 5 5 C 1.53717 * 107.28135 * 73.84202 * 4 2 1 6 6 C 1.52523 * 109.64045 * 59.13071 * 5 4 2 7 7 N 1.46501 * 109.04533 * 162.44838 * 6 5 4 8 8 C 1.34768 * 119.99853 * 204.99737 * 7 6 5 9 9 O 1.21280 * 120.00640 * 359.97438 * 8 7 6 10 10 C 1.50700 * 119.99931 * 179.97438 * 8 7 6 11 11 O 1.42900 * 109.47402 * 180.02562 * 10 8 7 12 12 C 1.35919 * 116.99831 * 180.02562 * 11 10 8 13 13 C 1.38670 * 120.06172 * 359.72406 * 12 11 10 14 14 C 1.38192 * 119.95340 * 179.72183 * 13 12 11 15 15 C 1.38239 * 120.07103 * 0.53376 * 14 13 12 16 16 C 1.50704 * 119.94312 * 179.74539 * 15 14 13 17 17 O 1.42898 * 109.46926 * 120.01809 * 16 15 14 18 18 Si 1.86304 * 109.46758 * 0.02562 * 16 15 14 19 19 H 1.48498 * 109.47166 * 300.00402 * 18 16 15 20 20 H 1.48502 * 109.47177 * 60.00347 * 18 16 15 21 21 H 1.48497 * 109.46741 * 180.02562 * 18 16 15 22 22 C 1.38288 * 120.11858 * 359.76523 * 15 14 13 23 23 C 1.38195 * 120.04536 * 359.95337 * 22 15 14 24 24 Br 1.89093 * 120.03766 * 180.02562 * 23 22 15 25 25 C 1.52526 * 111.65044 * 283.00391 * 6 5 4 26 26 C 1.53718 * 109.64069 * 76.99387 * 25 6 5 27 27 H 1.08998 * 109.47265 * 298.78752 * 1 2 3 28 28 H 1.08998 * 109.46604 * 58.78258 * 1 2 3 29 29 H 1.08998 * 109.47044 * 178.77779 * 1 2 3 30 30 H 1.08997 * 109.46801 * 181.21760 * 3 2 1 31 31 H 1.08998 * 109.46764 * 301.21646 * 3 2 1 32 32 H 1.09001 * 109.47018 * 61.21597 * 3 2 1 33 33 H 1.08999 * 109.89206 * 314.39989 * 4 2 1 34 34 H 1.08994 * 109.89087 * 193.28728 * 4 2 1 35 35 H 1.09004 * 109.43685 * 179.17761 * 5 4 2 36 36 H 1.08998 * 109.44248 * 299.10984 * 5 4 2 37 37 H 1.08992 * 109.04627 * 43.56278 * 6 5 4 38 38 H 0.97002 * 119.99240 * 24.99596 * 7 6 5 39 39 H 1.09000 * 109.47214 * 299.99965 * 10 8 7 40 40 H 1.09001 * 109.47064 * 59.99720 * 10 8 7 41 41 H 1.07998 * 120.02496 * 359.97438 * 13 12 11 42 42 H 1.08002 * 119.96691 * 180.27165 * 14 13 12 43 43 H 1.08995 * 109.47118 * 240.02073 * 16 15 14 44 44 H 0.96706 * 113.99508 * 179.97438 * 17 16 15 45 45 H 1.07996 * 119.97807 * 179.97438 * 22 15 14 46 46 H 1.09005 * 109.44381 * 197.03978 * 25 6 5 47 47 H 1.09005 * 109.44792 * 316.93920 * 25 6 5 48 48 H 1.08994 * 109.89361 * 60.31969 * 26 25 6 49 49 H 1.09003 * 109.89145 * 181.42843 * 26 25 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 14 1.8631 0.0000 0.0000 3 6 2.5003 1.7507 0.0000 4 6 2.5023 -0.9129 1.5064 5 6 2.2741 -2.4133 1.2619 6 6 3.0139 -2.8455 0.0001 7 7 3.1472 -4.3044 0.0000 8 6 4.1479 -4.8896 -0.6872 9 8 4.9379 -4.2085 -1.3061 10 6 4.2854 -6.3903 -0.6868 11 8 5.4134 -6.7656 -1.4797 12 6 5.6793 -8.0944 -1.5845 13 6 4.8749 -9.0172 -0.9332 14 6 5.1438 -10.3680 -1.0460 15 6 6.2203 -10.7995 -1.7984 16 6 6.5144 -12.2730 -1.9147 17 8 6.4533 -12.6639 -3.2878 18 14 5.2539 -13.2367 -0.9382 19 1 5.3171 -12.8304 0.4887 20 1 3.8963 -12.9592 -1.4722 21 1 5.5440 -14.6886 -1.0523 22 6 7.0281 -9.8815 -2.4441 23 6 6.7602 -8.5298 -2.3393 24 35 7.8645 -7.2747 -3.2230 25 6 2.2741 -2.4133 -1.2619 26 6 2.5023 -0.9129 -1.5063 27 1 -0.3634 0.4949 0.9006 28 1 -0.3632 0.5326 -0.8789 29 1 -0.3633 -1.0274 -0.0219 30 1 3.5900 1.7406 -0.0218 31 1 2.1241 2.2742 -0.8789 32 1 2.1596 2.2613 0.9007 33 1 1.9547 -0.5942 2.3933 34 1 3.5664 -0.7158 1.6356 35 1 2.6482 -2.9807 2.1141 36 1 1.2077 -2.6029 1.1396 37 1 4.0081 -2.3988 0.0000 38 1 2.5151 -4.8491 0.4947 39 1 4.4270 -6.7419 0.3351 40 1 3.3830 -6.8379 -1.1033 41 1 4.0364 -8.6808 -0.3416 42 1 4.5149 -11.0872 -0.5424 43 1 7.5108 -12.4767 -1.5229 44 1 6.6331 -13.6022 -3.4380 45 1 7.8688 -10.2211 -3.0309 46 1 2.6483 -2.9807 -2.1141 47 1 1.2076 -2.6031 -1.1403 48 1 3.5664 -0.7159 -1.6356 49 1 1.9547 -0.5942 -2.3933 RHF calculation, no. of doubly occupied orbitals= 64 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16807780_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 18:54:35 Heat of formation + Delta-G solvation = -118.924271 kcal Electronic energy + Delta-G solvation = -28596.341366 eV Core-core repulsion = 24500.285075 eV Total energy + Delta-G solvation = -4096.056291 eV No. of doubly occupied orbitals = 64 Molecular weight (most abundant/longest-lived isotopes) = 415.077 amu Computer time = 0.79 seconds Orbital eigenvalues (eV) -41.66805 -40.76377 -39.17583 -37.81538 -37.26077 -34.10982 -33.55178 -32.12678 -32.02318 -30.48591 -29.82281 -29.22757 -28.49864 -26.69469 -26.04321 -23.96514 -23.58264 -22.30494 -21.58834 -21.47702 -19.60294 -18.63386 -18.33248 -17.52944 -17.36974 -17.12457 -16.74723 -16.22523 -15.92262 -15.83281 -15.63978 -15.15193 -15.05648 -14.66094 -14.52434 -14.18627 -14.14034 -14.02802 -13.93574 -13.77649 -13.52742 -13.45969 -13.40390 -13.30576 -13.16711 -13.04433 -12.67043 -12.59517 -12.34916 -12.25873 -12.19805 -11.98407 -11.86294 -11.84388 -11.73891 -10.97803 -10.92931 -10.84017 -10.53538 -10.43488 -10.34306 -10.05343 -9.90338 -9.25363 -0.03690 0.13407 0.76966 1.06764 1.33684 1.38181 1.40538 1.52995 1.68303 1.80613 1.80813 1.84507 2.37413 2.47636 2.56297 3.26112 3.42104 3.57649 3.64032 3.72290 3.76749 3.83418 3.88119 3.99692 4.06215 4.12294 4.24323 4.29711 4.42713 4.44138 4.55717 4.61503 4.67571 4.68488 4.71284 4.72802 4.74019 4.81267 4.82583 4.95315 5.01784 5.14267 5.22518 5.23827 5.26958 5.37817 5.41495 5.45515 5.51003 5.54383 6.02693 6.37855 6.51030 7.13931 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C -0.445 4.445 2 Si 0.991 3.009 3 C -0.448 4.448 4 C -0.403 4.403 5 C -0.115 4.115 6 C 0.138 3.862 7 N -0.726 5.726 8 C 0.515 3.485 9 O -0.505 6.505 10 C 0.036 3.964 11 O -0.273 6.273 12 C 0.160 3.840 13 C -0.199 4.199 14 C -0.067 4.067 15 C -0.108 4.108 16 C -0.077 4.077 17 O -0.544 6.544 18 Si 0.944 3.056 19 H -0.249 1.249 20 H -0.246 1.246 21 H -0.254 1.254 22 C -0.020 4.020 23 C -0.123 4.123 24 Br -0.025 7.025 25 C -0.117 4.117 26 C -0.404 4.404 27 H 0.068 0.932 28 H 0.069 0.931 29 H 0.068 0.932 30 H 0.070 0.930 31 H 0.069 0.931 32 H 0.068 0.932 33 H 0.081 0.919 34 H 0.079 0.921 35 H 0.070 0.930 36 H 0.071 0.929 37 H 0.092 0.908 38 H 0.401 0.599 39 H 0.097 0.903 40 H 0.097 0.903 41 H 0.141 0.859 42 H 0.130 0.870 43 H 0.079 0.921 44 H 0.382 0.618 45 H 0.145 0.855 46 H 0.068 0.932 47 H 0.065 0.935 48 H 0.079 0.921 49 H 0.077 0.923 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.492 -2.987 4.864 7.263 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.553 4.553 2 Si 1.187 2.813 3 C -0.556 4.556 4 C -0.489 4.489 5 C -0.153 4.153 6 C 0.035 3.965 7 N -0.379 5.379 8 C 0.299 3.701 9 O -0.378 6.378 10 C -0.043 4.043 11 O -0.185 6.185 12 C 0.112 3.888 13 C -0.219 4.219 14 C -0.086 4.086 15 C -0.109 4.109 16 C -0.188 4.188 17 O -0.350 6.350 18 Si 0.766 3.234 19 H -0.173 1.173 20 H -0.170 1.170 21 H -0.178 1.178 22 C -0.040 4.040 23 C -0.203 4.203 24 Br 0.061 6.939 25 C -0.156 4.156 26 C -0.490 4.490 27 H 0.088 0.912 28 H 0.088 0.912 29 H 0.087 0.913 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.088 0.912 33 H 0.099 0.901 34 H 0.098 0.902 35 H 0.089 0.911 36 H 0.089 0.911 37 H 0.110 0.890 38 H 0.235 0.765 39 H 0.114 0.886 40 H 0.115 0.885 41 H 0.158 0.842 42 H 0.147 0.853 43 H 0.097 0.903 44 H 0.229 0.771 45 H 0.163 0.837 46 H 0.086 0.914 47 H 0.084 0.916 48 H 0.097 0.903 49 H 0.096 0.904 Dipole moment (debyes) X Y Z Total from point charges -4.122 -1.671 4.381 6.243 hybrid contribution -0.319 -1.074 0.397 1.188 sum -4.442 -2.744 4.778 7.077 Atomic orbital electron populations 1.26088 1.20358 1.04377 1.04478 0.79662 0.67428 0.67007 0.67176 1.26072 1.06455 1.18596 1.04443 1.26205 1.06716 1.01215 1.14769 1.21457 1.00514 0.96891 0.96446 1.21098 1.01454 0.78827 0.95151 1.45969 1.31019 1.08231 1.52704 1.19934 0.81445 0.88937 0.79796 1.90808 1.41422 1.64617 1.40928 1.22577 0.90108 0.94392 0.97224 1.86289 1.45913 1.19683 1.66566 1.18621 0.93168 0.83025 0.94031 1.21105 1.02500 0.93070 1.05199 1.20885 0.95312 0.95529 0.96832 1.19164 0.96920 0.93939 1.00852 1.24664 1.08006 0.96167 0.89948 1.86515 1.94457 1.30977 1.23073 0.85783 0.79452 0.79056 0.79062 1.17283 1.16977 1.17796 1.20842 0.98559 0.89121 0.95439 1.21135 0.98868 0.94345 1.05935 1.96799 1.64175 1.56605 1.76349 1.21568 1.00060 0.96456 0.97483 1.26246 1.06689 1.01606 1.14464 0.91232 0.91192 0.91275 0.91114 0.91184 0.91236 0.90065 0.90218 0.91097 0.91060 0.89003 0.76527 0.88556 0.88544 0.84151 0.85273 0.90278 0.77074 0.83714 0.91354 0.91642 0.90260 0.90396 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C -0.45 0.93 8.65 101.05 0.87 1.80 16 2 Si 0.99 -2.80 11.59 -169.99 -1.97 -4.77 16 3 C -0.45 0.62 8.65 101.05 0.87 1.49 16 4 C -0.40 0.99 4.98 37.53 0.19 1.18 16 5 C -0.12 0.30 5.05 -26.60 -0.13 0.17 16 6 C 0.14 -0.10 2.03 -68.42 -0.14 -0.24 16 7 N -0.73 1.13 5.05 -54.28 -0.27 0.86 16 8 C 0.51 0.78 7.66 -10.99 -0.08 0.70 16 9 O -0.50 -3.30 16.17 -14.35 -0.23 -3.53 16 10 C 0.04 -0.03 5.22 36.01 0.19 0.16 16 11 O -0.27 -0.87 9.01 -39.40 -0.35 -1.23 16 12 C 0.16 0.39 6.68 -39.20 -0.26 0.13 16 13 C -0.20 0.01 9.04 -39.44 -0.36 -0.35 16 14 C -0.07 -0.01 8.66 -39.60 -0.34 -0.35 16 15 C -0.11 -0.10 5.42 -104.60 -0.57 -0.67 16 16 C -0.08 0.08 2.81 36.01 0.10 0.18 16 17 O -0.54 0.20 12.74 -35.23 -0.45 -0.25 16 18 Si 0.94 -1.48 25.07 -169.99 -4.26 -5.74 16 19 H -0.25 0.32 7.11 56.52 0.40 0.72 16 20 H -0.25 0.07 7.11 56.52 0.40 0.47 16 21 H -0.25 0.33 7.11 56.52 0.40 0.73 16 22 C -0.02 -0.04 9.35 -39.58 -0.37 -0.41 16 23 C -0.12 -0.40 6.24 -39.37 -0.25 -0.65 16 24 Br -0.02 -0.11 33.16 -68.01 -2.26 -2.36 16 25 C -0.12 0.04 5.18 -26.60 -0.14 -0.10 16 26 C -0.40 0.32 4.98 37.53 0.19 0.51 16 27 H 0.07 -0.14 7.96 -51.93 -0.41 -0.56 16 28 H 0.07 -0.12 7.96 -51.93 -0.41 -0.53 16 29 H 0.07 -0.16 7.96 -51.93 -0.41 -0.57 16 30 H 0.07 -0.07 7.96 -51.93 -0.41 -0.49 16 31 H 0.07 -0.08 7.96 -51.93 -0.41 -0.50 16 32 H 0.07 -0.10 7.96 -51.93 -0.41 -0.52 16 33 H 0.08 -0.23 7.99 -51.93 -0.41 -0.65 16 34 H 0.08 -0.15 7.99 -51.93 -0.41 -0.57 16 35 H 0.07 -0.20 8.13 -51.93 -0.42 -0.62 16 36 H 0.07 -0.27 7.69 -51.93 -0.40 -0.67 16 37 H 0.09 0.12 7.34 -51.93 -0.38 -0.26 16 38 H 0.40 -1.98 8.58 -40.82 -0.35 -2.33 16 39 H 0.10 -0.36 7.65 -51.93 -0.40 -0.75 16 40 H 0.10 -0.34 7.67 -51.93 -0.40 -0.74 16 41 H 0.14 -0.46 6.30 -52.49 -0.33 -0.79 16 42 H 0.13 -0.22 4.87 -52.49 -0.26 -0.48 16 43 H 0.08 -0.22 7.96 -51.93 -0.41 -0.63 16 44 H 0.38 -1.81 8.74 45.56 0.40 -1.42 16 45 H 0.15 0.16 8.06 -52.49 -0.42 -0.26 16 46 H 0.07 0.14 7.92 -51.93 -0.41 -0.27 16 47 H 0.06 -0.12 7.69 -51.93 -0.40 -0.52 16 48 H 0.08 0.02 7.99 -51.93 -0.41 -0.39 16 49 H 0.08 -0.07 7.99 -51.93 -0.41 -0.48 16 LS Contribution 413.06 15.07 6.22 6.22 Total: 0.00 -9.40 413.06 -10.92 -20.32 By element: Atomic # 1 Polarization: -5.94 SS G_CDS: -7.12 Total: -13.06 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: -0.23 Total: 3.54 kcal Atomic # 7 Polarization: 1.13 SS G_CDS: -0.27 Total: 0.86 kcal Atomic # 8 Polarization: -3.97 SS G_CDS: -1.04 Total: -5.00 kcal Atomic # 14 Polarization: -4.28 SS G_CDS: -6.23 Total: -10.51 kcal Atomic # 35 Polarization: -0.11 SS G_CDS: -2.26 Total: -2.36 kcal Total LS contribution 6.22 Total: 6.22 kcal Total: -9.40 -10.92 -20.32 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16807780_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -98.607 kcal (2) G-P(sol) polarization free energy of solvation -9.398 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -108.004 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.920 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -20.318 kcal (6) G-S(sol) free energy of system = (1) + (5) -118.924 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds