Wall clock time and date at job start Tue Mar 9 2021 14:00:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38186 * 120.07722 * 180.02562 * 5 4 2 7 7 C 1.38677 * 119.95229 * 359.97438 * 6 5 4 8 8 O 1.35916 * 120.06188 * 179.97438 * 7 6 5 9 9 C 1.42901 * 116.99819 * 0.02562 * 8 7 6 10 10 C 1.50701 * 109.47165 * 179.97438 * 9 8 7 11 11 O 1.21275 * 119.99834 * 0.02562 * 10 9 8 12 12 N 1.34778 * 119.99768 * 179.97438 * 10 9 8 13 13 C 1.46501 * 119.99861 * 179.97438 * 12 10 9 14 14 C 1.52992 * 109.47362 * 180.02562 * 13 12 10 15 15 F 1.39907 * 109.46895 * 60.00141 * 14 13 12 16 16 C 1.52993 * 109.47376 * 180.02562 * 14 13 12 17 17 C 1.53000 * 109.47419 * 59.99900 * 16 14 13 18 18 C 1.53004 * 109.46554 * 60.00033 * 17 16 14 19 19 H 1.08997 * 109.47104 * 60.00374 * 18 17 16 20 20 C 1.53010 * 109.46596 * 180.02562 * 18 17 16 21 21 O 1.42901 * 109.46831 * 184.99866 * 20 18 17 22 22 C 1.52992 * 109.47408 * 299.99733 * 18 17 16 23 23 C 1.53004 * 109.47224 * 300.00684 * 14 13 12 24 24 C 1.38841 * 119.88212 * 0.02562 * 7 6 5 25 25 Br 1.89097 * 120.03520 * 179.97438 * 24 7 6 26 26 C 1.38192 * 119.92549 * 359.72517 * 24 7 6 27 27 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 28 28 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 29 29 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 30 30 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 31 31 H 1.08008 * 119.96214 * 359.97438 * 5 4 2 32 32 H 1.07995 * 120.02789 * 179.97438 * 6 5 4 33 33 H 1.09002 * 109.47015 * 299.99782 * 9 8 7 34 34 H 1.08997 * 109.47242 * 59.99509 * 9 8 7 35 35 H 0.96998 * 119.99989 * 0.02562 * 12 10 9 36 36 H 1.09002 * 109.47244 * 300.00740 * 13 12 10 37 37 H 1.09007 * 109.46935 * 60.00492 * 13 12 10 38 38 H 1.08997 * 109.47315 * 180.02562 * 16 14 13 39 39 H 1.09002 * 109.46965 * 300.00102 * 16 14 13 40 40 H 1.09002 * 109.47177 * 180.02562 * 17 16 14 41 41 H 1.08997 * 109.47109 * 300.00410 * 17 16 14 42 42 H 1.08992 * 109.47012 * 305.00059 * 20 18 17 43 43 H 1.09001 * 109.46989 * 65.00354 * 20 18 17 44 44 H 0.96701 * 113.99528 * 179.97438 * 21 20 18 45 45 H 1.09002 * 109.47143 * 180.02562 * 22 18 17 46 46 H 1.08997 * 109.47511 * 300.00391 * 22 18 17 47 47 H 1.08992 * 109.47462 * 59.99442 * 23 14 13 48 48 H 1.08997 * 109.47104 * 179.97438 * 23 14 13 49 49 H 1.07997 * 119.97512 * 180.26846 * 26 24 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0560 -2.6879 -2.5754 7 6 2.8534 -2.0156 -3.4894 8 8 3.3070 -2.6570 -4.5985 9 6 2.9230 -4.0240 -4.7600 10 6 3.5142 -4.5644 -6.0365 11 8 4.1974 -3.8495 -6.7386 12 7 3.2844 -5.8425 -6.3974 13 6 3.8586 -6.3677 -7.6386 14 6 3.4477 -7.8312 -7.8115 15 9 2.0526 -7.9202 -7.8688 16 6 4.0478 -8.3799 -9.1074 17 6 5.5734 -8.2826 -9.0442 18 6 6.0877 -9.1004 -7.8577 19 1 5.7949 -10.1430 -7.9808 20 6 7.6134 -9.0026 -7.7941 21 8 8.1027 -9.8578 -6.7591 22 6 5.4877 -8.5517 -6.5617 23 6 3.9624 -8.6490 -6.6252 24 6 3.1885 -0.6864 -3.2689 25 35 4.2761 0.2342 -4.5119 26 6 2.7220 -0.0356 -2.1426 27 1 -0.3934 0.4418 -0.7650 28 1 1.7923 -0.5138 0.8899 29 1 1.5616 2.4678 1.2086 30 1 3.5346 1.7703 -0.0322 31 1 0.9758 -2.5574 -0.7361 32 1 1.7943 -3.7220 -2.7445 33 1 3.2891 -4.6065 -3.9145 34 1 1.8362 -4.0932 -4.8054 35 1 2.7382 -6.4143 -5.8356 36 1 3.4915 -5.7853 -8.4837 37 1 4.9455 -6.2980 -7.5941 38 1 3.7547 -9.4224 -9.2307 39 1 3.6814 -7.7973 -9.9527 40 1 6.0010 -8.6731 -9.9677 41 1 5.8662 -7.2400 -8.9210 42 1 8.0373 -9.3098 -8.7500 43 1 7.9030 -7.9734 -7.5821 44 1 9.0647 -9.8467 -6.6617 45 1 5.8544 -9.1340 -5.7164 46 1 5.7805 -7.5090 -6.4386 47 1 3.5352 -8.2583 -5.7018 48 1 3.6693 -9.6916 -6.7481 49 1 2.9786 0.9996 -1.9725 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16921692_6201210.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:00:50 Heat of formation + Delta-G solvation = -175.247178 kcal Electronic energy + Delta-G solvation = -33724.095591 eV Core-core repulsion = 28806.592272 eV Total energy + Delta-G solvation = -4917.503319 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 432.083 amu Computer time = 0.89 seconds Orbital eigenvalues (eV) -48.83020 -41.71613 -40.87003 -39.98095 -39.08761 -37.48649 -37.20809 -35.69292 -33.51398 -32.54924 -32.12393 -32.00054 -30.61589 -29.85126 -27.60856 -26.32539 -25.60803 -24.14161 -23.86203 -22.45331 -22.04838 -21.69230 -20.30742 -19.57384 -18.67986 -18.23184 -18.10656 -17.84791 -17.53593 -17.30665 -17.01443 -16.47877 -16.24191 -16.07976 -15.97920 -15.87232 -15.75337 -15.59460 -15.42616 -14.92808 -14.79116 -14.54521 -14.30808 -14.23949 -14.20344 -14.09663 -13.84951 -13.56254 -13.41647 -13.29185 -13.04221 -12.60524 -12.44046 -12.25282 -12.21976 -12.20942 -12.14982 -11.87296 -11.86525 -11.54875 -11.34460 -11.21084 -11.13762 -11.04997 -10.83065 -10.46679 -10.29863 -10.00627 -9.32332 -5.03368 -0.04360 0.07231 0.62660 1.28485 1.32880 1.38906 1.59125 1.92812 2.39165 2.42979 3.18043 3.23389 3.32825 3.40680 3.44563 3.48515 3.55363 3.61593 3.78003 3.80276 3.84064 3.96999 4.00463 4.03937 4.08026 4.20148 4.26933 4.33311 4.36821 4.40526 4.45626 4.46339 4.52543 4.61227 4.62186 4.68235 4.77242 4.77926 4.91586 4.96727 5.02788 5.05128 5.08955 5.12616 5.16104 5.29350 5.31539 5.42104 5.45003 6.01548 6.30688 6.77187 6.85826 7.01477 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.053 4.053 3 Si 0.745 3.255 4 C -0.151 4.151 5 C -0.033 4.033 6 C -0.195 4.195 7 C 0.149 3.851 8 O -0.303 6.303 9 C 0.034 3.966 10 C 0.515 3.485 11 O -0.562 6.562 12 N -0.710 5.710 13 C 0.100 3.900 14 C 0.116 3.884 15 F -0.214 7.214 16 C -0.134 4.134 17 C -0.112 4.112 18 C -0.091 4.091 19 H 0.076 0.924 20 C 0.075 3.925 21 O -0.594 6.594 22 C -0.105 4.105 23 C -0.135 4.135 24 C -0.139 4.139 25 Br -0.048 7.048 26 C -0.055 4.055 27 H 0.396 0.604 28 H 0.118 0.882 29 H -0.293 1.293 30 H -0.288 1.288 31 H 0.155 0.845 32 H 0.171 0.829 33 H 0.130 0.870 34 H 0.129 0.871 35 H 0.418 0.582 36 H 0.069 0.931 37 H 0.094 0.906 38 H 0.087 0.913 39 H 0.083 0.917 40 H 0.086 0.914 41 H 0.072 0.928 42 H 0.055 0.945 43 H 0.049 0.951 44 H 0.395 0.605 45 H 0.070 0.930 46 H 0.064 0.936 47 H 0.086 0.914 48 H 0.082 0.918 49 H 0.147 0.853 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.834 -4.943 0.378 5.286 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.165 4.165 3 Si 0.652 3.348 4 C -0.152 4.152 5 C -0.052 4.052 6 C -0.214 4.214 7 C 0.101 3.899 8 O -0.215 6.215 9 C -0.044 4.044 10 C 0.301 3.699 11 O -0.440 6.440 12 N -0.365 5.365 13 C -0.024 4.024 14 C 0.098 3.902 15 F -0.194 7.194 16 C -0.172 4.172 17 C -0.150 4.150 18 C -0.109 4.109 19 H 0.094 0.906 20 C -0.002 4.002 21 O -0.402 6.402 22 C -0.143 4.143 23 C -0.173 4.173 24 C -0.219 4.219 25 Br 0.037 6.963 26 C -0.074 4.074 27 H 0.246 0.754 28 H 0.136 0.864 29 H -0.220 1.220 30 H -0.215 1.215 31 H 0.173 0.827 32 H 0.189 0.811 33 H 0.147 0.853 34 H 0.146 0.854 35 H 0.255 0.745 36 H 0.087 0.913 37 H 0.111 0.889 38 H 0.105 0.895 39 H 0.102 0.898 40 H 0.104 0.896 41 H 0.091 0.909 42 H 0.074 0.926 43 H 0.067 0.933 44 H 0.245 0.755 45 H 0.089 0.911 46 H 0.083 0.917 47 H 0.105 0.895 48 H 0.101 0.899 49 H 0.164 0.836 Dipole moment (debyes) X Y Z Total from point charges -0.917 -3.852 0.256 3.968 hybrid contribution 0.299 -0.822 0.458 0.987 sum -0.618 -4.674 0.714 4.768 Atomic orbital electron populations 1.86475 1.16762 1.81977 1.50619 1.24837 0.85437 1.09337 0.96872 0.93962 0.78407 0.76953 0.85432 1.20305 1.01223 0.95968 0.97732 1.21199 0.95147 0.93003 0.95813 1.21599 1.01716 1.02554 0.95570 1.18801 0.93581 0.90686 0.86823 1.86235 1.70219 1.25474 1.39567 1.22797 1.02911 0.81572 0.97100 1.20428 0.80442 0.81950 0.87047 1.90787 1.39681 1.58513 1.54996 1.45598 1.54004 1.11735 1.25187 1.22056 1.00436 0.92790 0.87084 1.21201 0.75443 0.94653 0.98932 1.92878 1.31578 1.97312 1.97663 1.22045 0.96316 1.03256 0.95603 1.21548 0.93929 1.00929 0.98585 1.21209 0.93605 1.00754 0.95348 0.90578 1.22280 0.94282 0.93304 0.90346 1.86414 1.28705 1.68034 1.57075 1.21472 0.93391 1.01437 0.97997 1.22101 0.96852 1.01145 0.97174 1.21137 1.07547 0.93986 0.99272 1.96771 1.66419 1.75202 1.57925 1.20925 0.95527 0.99778 0.91184 0.75383 0.86449 1.22029 1.21518 0.82714 0.81140 0.85273 0.85369 0.74450 0.91282 0.88852 0.89450 0.89791 0.89580 0.90921 0.92645 0.93293 0.75511 0.91096 0.91744 0.89543 0.89936 0.83586 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.54 12.77 -148.98 -1.90 -0.36 16 2 C -0.05 0.15 2.82 71.24 0.20 0.35 16 3 Si 0.75 -1.32 29.78 68.60 2.04 0.72 16 4 C -0.15 0.30 5.39 -19.85 -0.11 0.19 16 5 C -0.03 0.13 9.60 22.26 0.21 0.35 16 6 C -0.20 0.80 9.04 22.36 0.20 1.00 16 7 C 0.15 0.34 6.68 22.52 0.15 0.49 16 8 O -0.30 -1.40 9.01 -73.57 -0.66 -2.06 16 9 C 0.03 -0.14 5.22 71.24 0.37 0.23 16 10 C 0.52 1.07 7.91 87.66 0.69 1.77 16 11 O -0.56 -7.36 16.50 16.02 0.26 -7.10 16 12 N -0.71 2.47 5.19 -463.06 -2.40 0.07 16 13 C 0.10 -0.18 4.18 86.38 0.36 0.18 16 14 C 0.12 -0.44 1.08 -10.80 -0.01 -0.45 16 15 F -0.21 -0.06 16.67 44.97 0.75 0.69 16 16 C -0.13 0.66 5.19 30.59 0.16 0.82 16 17 C -0.11 0.65 4.93 30.60 0.15 0.80 16 18 C -0.09 0.36 2.43 -10.79 -0.03 0.33 16 19 H 0.08 -0.18 8.14 -2.39 -0.02 -0.20 16 20 C 0.08 -0.26 6.43 71.99 0.46 0.21 16 21 O -0.59 0.42 13.19 -148.98 -1.97 -1.54 16 22 C -0.11 0.41 4.82 30.58 0.15 0.56 16 23 C -0.13 0.75 5.01 30.58 0.15 0.90 16 24 C -0.14 -0.62 6.24 22.40 0.14 -0.48 16 25 Br -0.05 -0.38 33.16 -20.37 -0.68 -1.06 16 26 C -0.05 -0.04 8.40 22.27 0.19 0.15 16 27 H 0.40 -4.02 8.70 -74.05 -0.64 -4.67 16 28 H 0.12 -0.33 7.96 -2.39 -0.02 -0.35 16 29 H -0.29 -1.55 7.11 99.48 0.71 -0.84 16 30 H -0.29 -1.11 7.11 99.48 0.71 -0.41 16 31 H 0.16 -1.12 8.06 -2.91 -0.02 -1.14 16 32 H 0.17 -1.91 6.30 -2.91 -0.02 -1.93 16 33 H 0.13 -1.39 7.66 -2.39 -0.02 -1.41 16 34 H 0.13 -1.32 7.66 -2.39 -0.02 -1.34 16 35 H 0.42 -3.84 7.26 -92.71 -0.67 -4.51 16 36 H 0.07 0.09 8.14 -2.39 -0.02 0.07 16 37 H 0.09 -0.11 4.81 -2.38 -0.01 -0.13 16 38 H 0.09 -0.45 8.14 -2.39 -0.02 -0.47 16 39 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 40 H 0.09 -0.61 8.14 -2.39 -0.02 -0.63 16 41 H 0.07 -0.39 6.43 -2.39 -0.02 -0.40 16 42 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 43 H 0.05 -0.19 8.14 -2.39 -0.02 -0.21 16 44 H 0.40 -3.24 9.12 -74.06 -0.68 -3.91 16 45 H 0.07 -0.10 7.82 -2.39 -0.02 -0.12 16 46 H 0.06 -0.20 6.43 -2.39 -0.02 -0.22 16 47 H 0.09 -0.70 6.86 -2.39 -0.02 -0.71 16 48 H 0.08 -0.41 8.14 -2.39 -0.02 -0.43 16 49 H 0.15 -0.19 4.87 -2.91 -0.01 -0.21 16 Total: 0.00 -26.12 410.92 -2.03 -28.15 By element: Atomic # 1 Polarization: -23.98 SS G_CDS: -0.92 Total: -24.91 kcal Atomic # 6 Polarization: 3.94 SS G_CDS: 3.45 Total: 7.39 kcal Atomic # 7 Polarization: 2.47 SS G_CDS: -2.40 Total: 0.07 kcal Atomic # 8 Polarization: -6.80 SS G_CDS: -4.27 Total: -11.07 kcal Atomic # 9 Polarization: -0.06 SS G_CDS: 0.75 Total: 0.69 kcal Atomic # 14 Polarization: -1.32 SS G_CDS: 2.04 Total: 0.72 kcal Atomic # 35 Polarization: -0.38 SS G_CDS: -0.68 Total: -1.06 kcal Total: -26.12 -2.03 -28.15 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16921692_6201210.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute -147.098 kcal (2) G-P(sol) polarization free energy of solvation -26.124 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system -173.222 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -2.025 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -28.149 kcal (6) G-S(sol) free energy of system = (1) + (5) -175.247 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.89 seconds