Wall clock time and date at job start Tue Mar 9 2021 14:06:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86304 * 109.46536 * 2 1 4 4 C 1.50694 * 109.47502 * 120.00329 * 2 1 3 5 5 C 1.31120 * 118.54531 * 249.98343 * 4 2 1 6 6 N 1.38922 * 121.84794 * 180.42674 * 5 4 2 7 7 C 1.47034 * 118.88393 * 346.68379 * 6 5 4 8 8 C 1.53537 * 107.65920 * 43.66432 * 7 6 5 9 9 C 1.50198 * 118.54770 * 69.99888 * 4 2 1 10 10 C 1.50705 * 109.33022 * 39.66891 * 9 4 2 11 11 O 1.21281 * 120.00071 * 120.85892 * 10 9 4 12 12 N 1.34777 * 119.99937 * 300.86397 * 10 9 4 13 13 C 1.46497 * 120.00242 * 179.97438 * 12 10 9 14 14 C 1.52990 * 109.47171 * 179.97438 * 13 12 10 15 15 H 1.09000 * 112.90908 * 43.75361 * 14 13 12 16 16 C 1.53786 * 113.61464 * 174.99989 * 14 13 12 17 17 C 1.53781 * 87.17350 * 140.02626 * 16 14 13 18 18 H 1.09000 * 113.61379 * 219.89528 * 17 16 14 19 19 N 1.46505 * 113.61334 * 89.07333 * 17 16 14 20 20 C 1.34421 * 126.82354 * 274.70846 * 19 17 16 21 21 N 1.30835 * 108.07509 * 179.89642 * 20 19 17 22 22 C 1.33234 * 109.82875 * 0.38000 * 21 20 19 23 23 N 1.30711 * 108.94795 * 359.76566 * 22 21 20 24 24 C 1.53781 * 87.08070 * 334.52830 * 17 16 14 25 25 H 0.96700 * 113.99763 * 299.99368 * 1 2 3 26 26 H 1.09001 * 109.47153 * 240.00831 * 2 1 3 27 27 H 1.48497 * 110.00084 * 300.00308 * 3 2 1 28 28 H 1.48498 * 109.99985 * 61.32563 * 3 2 1 29 29 H 1.08003 * 119.07763 * 0.42321 * 5 4 2 30 30 H 0.96998 * 120.55832 * 166.69977 * 6 5 4 31 31 H 1.08997 * 109.81956 * 284.12102 * 7 6 5 32 32 H 1.08995 * 109.86955 * 163.23001 * 7 6 5 33 33 H 1.08994 * 109.62548 * 179.33184 * 8 7 6 34 34 H 1.09003 * 109.62780 * 58.77105 * 8 7 6 35 35 H 1.09001 * 109.19425 * 280.09817 * 9 4 2 36 36 H 0.97003 * 119.99582 * 359.97438 * 12 10 9 37 37 H 1.09007 * 109.46596 * 59.99839 * 13 12 10 38 38 H 1.08994 * 109.47005 * 300.00149 * 13 12 10 39 39 H 1.09002 * 113.61357 * 25.43543 * 16 14 13 40 40 H 1.09002 * 113.61608 * 254.61705 * 16 14 13 41 41 H 1.07997 * 125.96578 * 0.04204 * 20 19 17 42 42 H 1.08008 * 125.52719 * 179.80009 * 22 21 20 43 43 H 1.09005 * 113.61471 * 139.98321 * 24 17 16 44 44 H 1.08996 * 113.61178 * 270.79663 * 24 17 16 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0499 1.7566 0.0000 4 6 1.9314 -0.7104 1.2303 5 6 2.5120 -0.0029 2.1692 6 7 3.0080 -0.5882 3.3274 7 6 2.6240 -1.9717 3.6445 8 6 2.7184 -2.7899 2.3488 9 6 1.7453 -2.1977 1.3267 10 6 1.9984 -2.8206 -0.0221 11 8 2.8699 -3.6541 -0.1512 12 7 1.2564 -2.4512 -1.0848 13 6 1.5028 -3.0562 -2.3961 14 6 0.5311 -2.4669 -3.4204 15 1 0.4269 -1.3854 -3.3330 16 6 0.7864 -2.9470 -4.8589 17 6 -0.7406 -3.0273 -5.0220 18 1 -1.0743 -3.8986 -5.5856 19 7 -1.3471 -1.7792 -5.4920 20 6 -1.7262 -0.7335 -4.7372 21 7 -2.2192 0.1824 -5.5309 22 6 -2.1793 -0.2439 -6.7926 23 7 -1.6535 -1.4402 -6.8200 24 6 -0.8149 -3.2122 -3.4971 25 1 -0.3933 0.4416 0.7651 26 1 1.7924 -0.5137 -0.8901 27 1 1.5612 2.4680 -1.2084 28 1 1.5878 2.4585 1.2243 29 1 2.6074 1.0650 2.0386 30 1 3.5975 -0.0926 3.9170 31 1 1.6019 -1.9941 4.0223 32 1 3.3031 -2.3826 4.3915 33 1 2.4509 -3.8271 2.5505 34 1 3.7347 -2.7406 1.9578 35 1 0.7223 -2.4115 1.6365 36 1 0.5592 -1.7847 -0.9814 37 1 1.3537 -4.1342 -2.3326 38 1 2.5272 -2.8487 -2.7052 39 1 1.2830 -3.9157 -4.9143 40 1 1.2543 -2.1945 -5.4937 41 1 -1.6371 -0.6610 -3.6634 42 1 -2.5249 0.3096 -7.6533 43 1 -1.6399 -2.6730 -3.0316 44 1 -0.7576 -4.2535 -3.1803 There are 59 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 59 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946164_15608500.mol2 44 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:06:01 Heat of formation + Delta-G solvation = 90.293265 kcal Electronic energy + Delta-G solvation = -27872.248279 eV Core-core repulsion = 24022.966236 eV Total energy + Delta-G solvation = -3849.282043 eV No. of doubly occupied orbitals = 59 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 320.164 amu Computer time = 0.58 seconds Orbital eigenvalues (eV) -43.24470 -41.57817 -40.25616 -39.12362 -37.73845 -35.65524 -33.66475 -33.10772 -32.67350 -32.15329 -29.24539 -27.19042 -26.95546 -25.98153 -24.66535 -23.22604 -23.08215 -22.38711 -21.73774 -20.64684 -19.33227 -18.98190 -18.12103 -17.86219 -17.42514 -17.14289 -16.78096 -16.70666 -16.16206 -15.95253 -15.76526 -15.52642 -15.41568 -15.17632 -14.89235 -14.58558 -14.49276 -14.13484 -13.90632 -13.74165 -13.49708 -13.17124 -13.13295 -12.99288 -12.65990 -12.26428 -12.13005 -11.94649 -11.76886 -11.64304 -11.60780 -11.34658 -11.07893 -10.88557 -10.77232 -10.57806 -10.42219 -9.90138 -8.43697 -4.88464 0.57914 1.25284 1.26035 1.36436 1.55966 1.75892 1.92115 1.98380 2.31148 2.67955 3.09047 3.27181 3.40242 3.40998 3.53145 3.64366 3.71500 3.86472 3.87929 4.00968 4.09839 4.17398 4.24263 4.33249 4.37084 4.42242 4.53459 4.62086 4.65435 4.66738 4.70728 4.76805 4.82082 4.85272 4.91577 4.92440 5.13536 5.23064 5.28760 5.30353 5.40025 5.45761 5.52083 5.85997 6.32550 6.52173 6.71580 6.97201 7.04442 7.31143 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.547 6.547 2 C -0.068 4.068 3 Si 0.730 3.270 4 C -0.294 4.294 5 C 0.158 3.842 6 N -0.745 5.745 7 C 0.122 3.878 8 C -0.120 4.120 9 C -0.033 4.033 10 C 0.521 3.479 11 O -0.584 6.584 12 N -0.721 5.721 13 C 0.127 3.873 14 C -0.119 4.119 15 H 0.099 0.901 16 C -0.128 4.128 17 C 0.117 3.883 18 H 0.119 0.881 19 N -0.361 5.361 20 C 0.256 3.744 21 N -0.578 5.578 22 C 0.190 3.810 23 N -0.349 5.349 24 C -0.123 4.123 25 H 0.390 0.610 26 H 0.116 0.884 27 H -0.307 1.307 28 H -0.274 1.274 29 H 0.146 0.854 30 H 0.413 0.587 31 H 0.068 0.932 32 H 0.098 0.902 33 H 0.076 0.924 34 H 0.060 0.940 35 H 0.103 0.897 36 H 0.419 0.581 37 H 0.072 0.928 38 H 0.062 0.938 39 H 0.124 0.876 40 H 0.065 0.935 41 H 0.244 0.756 42 H 0.238 0.762 43 H 0.091 0.909 44 H 0.128 0.872 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 1.115 0.309 6.379 6.483 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.356 6.356 2 C -0.180 4.180 3 Si 0.638 3.362 4 C -0.305 4.305 5 C 0.035 3.965 6 N -0.375 5.375 7 C -0.003 4.003 8 C -0.158 4.158 9 C -0.054 4.054 10 C 0.309 3.691 11 O -0.464 6.464 12 N -0.378 5.378 13 C 0.004 3.996 14 C -0.137 4.137 15 H 0.117 0.883 16 C -0.167 4.167 17 C 0.015 3.985 18 H 0.137 0.863 19 N -0.151 5.151 20 C -0.040 4.040 21 N -0.305 5.305 22 C -0.113 4.113 23 N -0.176 5.176 24 C -0.162 4.162 25 H 0.241 0.759 26 H 0.133 0.867 27 H -0.236 1.236 28 H -0.200 1.200 29 H 0.163 0.837 30 H 0.250 0.750 31 H 0.086 0.914 32 H 0.116 0.884 33 H 0.095 0.905 34 H 0.078 0.922 35 H 0.120 0.880 36 H 0.261 0.739 37 H 0.090 0.910 38 H 0.080 0.920 39 H 0.142 0.858 40 H 0.084 0.916 41 H 0.260 0.740 42 H 0.254 0.746 43 H 0.109 0.891 44 H 0.146 0.854 Dipole moment (debyes) X Y Z Total from point charges 1.559 -0.063 5.237 5.464 hybrid contribution -1.107 0.366 0.533 1.282 sum 0.452 0.302 5.770 5.796 Atomic orbital electron populations 1.86349 1.18286 1.80222 1.50757 1.25007 0.83768 1.09978 0.99198 0.94273 0.91482 0.73858 0.76636 1.20380 1.17233 0.93469 0.99407 1.20702 0.92386 0.97023 0.86368 1.44688 1.53931 1.14612 1.24274 1.21671 1.01353 0.81241 0.96009 1.21688 0.99355 0.99506 0.95289 1.19652 1.01540 0.92862 0.91395 1.20939 0.80353 0.80850 0.86959 1.90686 1.34446 1.35133 1.86156 1.46574 1.38352 1.44440 1.08426 1.21330 0.98859 0.97897 0.81537 1.22904 0.95646 1.00755 0.94440 0.88290 1.23364 0.93876 1.04149 0.95333 1.22453 0.94956 0.83229 0.97879 0.86309 1.50390 1.45239 1.15438 1.04055 1.26535 0.93373 0.83102 1.00986 1.70596 1.25965 1.31647 1.02337 1.26563 0.97096 0.91106 0.96498 1.78018 1.23315 1.17903 0.98407 1.23580 0.97668 1.04129 0.90782 0.75939 0.86687 1.23587 1.20023 0.83728 0.75039 0.91416 0.88372 0.90549 0.92167 0.87965 0.73890 0.91016 0.91994 0.85809 0.91633 0.73986 0.74600 0.89060 0.85436 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 2.88 11.40 -148.98 -1.70 1.18 16 2 C -0.07 0.28 1.69 71.23 0.12 0.40 16 3 Si 0.73 -2.66 29.97 68.60 2.06 -0.60 16 4 C -0.29 0.99 5.03 -16.77 -0.08 0.90 16 5 C 0.16 -0.81 9.61 83.41 0.80 0.00 16 6 N -0.75 4.77 5.83 -345.90 -2.02 2.75 16 7 C 0.12 -0.72 7.16 86.46 0.62 -0.10 16 8 C -0.12 0.09 4.91 30.79 0.15 0.24 16 9 C -0.03 0.03 2.75 -12.43 -0.03 -0.01 16 10 C 0.52 1.93 6.85 87.66 0.60 2.53 16 11 O -0.58 -6.94 15.80 -3.03 -0.05 -6.99 16 12 N -0.72 0.99 3.86 -463.07 -1.79 -0.80 16 13 C 0.13 -0.35 5.52 86.38 0.48 0.12 16 14 C -0.12 0.77 3.36 -10.18 -0.03 0.73 16 15 H 0.10 -0.58 7.05 -2.39 -0.02 -0.60 16 16 C -0.13 0.65 7.43 31.12 0.23 0.89 16 17 C 0.12 -0.43 5.21 45.52 0.24 -0.19 16 18 H 0.12 -0.48 8.14 -2.39 -0.02 -0.50 16 19 N -0.36 -0.95 3.81 -328.93 -1.25 -2.21 16 20 C 0.26 0.55 10.82 180.36 1.95 2.50 16 21 N -0.58 -4.49 11.19 -204.01 -2.28 -6.77 16 22 C 0.19 1.26 13.03 180.77 2.36 3.62 16 23 N -0.35 -2.86 12.70 -61.25 -0.78 -3.63 16 24 C -0.12 1.03 6.90 31.21 0.22 1.25 16 25 H 0.39 -3.86 8.70 -74.06 -0.64 -4.50 16 26 H 0.12 -0.31 5.29 -2.39 -0.01 -0.33 16 27 H -0.31 -1.59 7.11 99.48 0.71 -0.88 16 28 H -0.27 0.40 6.82 99.48 0.68 1.08 16 29 H 0.15 -1.13 4.31 -2.91 -0.01 -1.14 16 30 H 0.41 -4.17 8.96 -92.71 -0.83 -5.00 16 31 H 0.07 -0.45 8.14 -2.39 -0.02 -0.47 16 32 H 0.10 -0.85 8.14 -2.39 -0.02 -0.87 16 33 H 0.08 -0.02 8.14 -2.39 -0.02 -0.04 16 34 H 0.06 0.24 7.77 -2.39 -0.02 0.22 16 35 H 0.10 -0.28 8.14 -2.39 -0.02 -0.30 16 36 H 0.42 -1.56 4.99 -92.71 -0.46 -2.02 16 37 H 0.07 -0.16 7.85 -2.38 -0.02 -0.18 16 38 H 0.06 -0.01 8.14 -2.39 -0.02 -0.03 16 39 H 0.12 -0.98 8.10 -2.39 -0.02 -1.00 16 40 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 41 H 0.24 -1.35 6.76 -2.91 -0.02 -1.37 16 42 H 0.24 0.02 8.06 -2.91 -0.02 -0.01 16 43 H 0.09 -0.85 7.02 -2.38 -0.02 -0.87 16 44 H 0.13 -1.35 7.91 -2.39 -0.02 -1.37 16 Total: 0.00 -23.41 348.50 -1.07 -24.47 By element: Atomic # 1 Polarization: -19.40 SS G_CDS: -0.87 Total: -20.26 kcal Atomic # 6 Polarization: 5.26 SS G_CDS: 7.61 Total: 12.87 kcal Atomic # 7 Polarization: -2.55 SS G_CDS: -8.12 Total: -10.67 kcal Atomic # 8 Polarization: -4.06 SS G_CDS: -1.75 Total: -5.81 kcal Atomic # 14 Polarization: -2.66 SS G_CDS: 2.06 Total: -0.60 kcal Total: -23.41 -1.07 -24.47 kcal The number of atoms in the molecule is 44 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_15608500.mol2 44 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 114.767 kcal (2) G-P(sol) polarization free energy of solvation -23.408 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 91.359 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -1.066 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -24.474 kcal (6) G-S(sol) free energy of system = (1) + (5) 90.293 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.59 seconds