Wall clock time and date at job start Tue Mar 9 2021 14:07:16 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42901 * 1 3 3 Si 1.86298 * 109.46997 * 2 1 4 4 C 1.50699 * 109.46830 * 240.00466 * 2 1 3 5 5 C 1.38237 * 119.94410 * 300.00207 * 4 2 1 6 6 C 1.38186 * 120.07541 * 179.97438 * 5 4 2 7 7 C 1.38681 * 119.95297 * 0.02562 * 6 5 4 8 8 O 1.35917 * 120.05679 * 179.97438 * 7 6 5 9 9 C 1.42900 * 117.00256 * 359.97438 * 8 7 6 10 10 C 1.50691 * 109.47311 * 180.02562 * 9 8 7 11 11 O 1.21287 * 120.00017 * 0.02562 * 10 9 8 12 12 N 1.34779 * 120.00438 * 180.02562 * 10 9 8 13 13 C 1.46491 * 120.00329 * 180.02562 * 12 10 9 14 14 C 1.53001 * 109.47130 * 179.97438 * 13 12 10 15 15 H 1.08995 * 112.85323 * 45.33177 * 14 13 12 16 16 C 1.53787 * 113.61523 * 176.52833 * 14 13 12 17 17 C 1.53781 * 87.07910 * 139.97781 * 16 14 13 18 18 H 1.09002 * 113.61429 * 219.93233 * 17 16 14 19 19 N 1.46508 * 113.61399 * 89.11685 * 17 16 14 20 20 C 1.34428 * 126.82318 * 274.70875 * 19 17 16 21 21 N 1.30830 * 108.07766 * 179.89005 * 20 19 17 22 22 C 1.33241 * 109.82724 * 0.38288 * 21 20 19 23 23 N 1.30715 * 108.94928 * 359.76299 * 22 21 20 24 24 C 1.53781 * 113.61353 * 274.13466 * 14 13 12 25 25 C 1.38834 * 119.88101 * 359.97438 * 7 6 5 26 26 Br 1.89097 * 120.03225 * 180.02562 * 25 7 6 27 27 C 1.38192 * 119.92764 * 359.70960 * 25 7 6 28 28 H 0.96708 * 114.00246 * 59.99398 * 1 2 3 29 29 H 1.08991 * 109.47274 * 120.00272 * 2 1 3 30 30 H 1.48506 * 109.99834 * 60.00805 * 3 2 1 31 31 H 1.48502 * 110.00011 * 181.32069 * 3 2 1 32 32 H 1.08007 * 119.96208 * 359.97438 * 5 4 2 33 33 H 1.08000 * 120.02542 * 180.02562 * 6 5 4 34 34 H 1.09001 * 109.46951 * 300.00838 * 9 8 7 35 35 H 1.09005 * 109.46715 * 60.00417 * 9 8 7 36 36 H 0.96998 * 119.99425 * 359.97438 * 12 10 9 37 37 H 1.08999 * 109.47023 * 299.99599 * 13 12 10 38 38 H 1.08996 * 109.47413 * 59.99824 * 13 12 10 39 39 H 1.08997 * 113.61412 * 254.52999 * 16 14 13 40 40 H 1.09003 * 113.61167 * 25.34708 * 16 14 13 41 41 H 1.07998 * 125.95646 * 0.03916 * 20 19 17 42 42 H 1.08004 * 125.52926 * 179.72465 * 22 21 20 43 43 H 1.09000 * 113.61540 * 334.56922 * 24 14 13 44 44 H 1.09002 * 113.61343 * 105.47000 * 24 14 13 45 45 H 1.07997 * 119.97512 * 180.28814 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9313 -0.7103 -1.2305 5 6 1.5965 -2.0338 -1.4483 6 6 2.0552 -2.6876 -2.5760 7 6 2.8526 -2.0152 -3.4899 8 8 3.3053 -2.6564 -4.5996 9 6 2.9214 -4.0234 -4.7610 10 6 3.5125 -4.5638 -6.0375 11 8 4.1958 -3.8489 -6.7397 12 7 3.2820 -5.8416 -6.3989 13 6 3.8571 -6.3671 -7.6395 14 6 3.4460 -7.8306 -7.8124 15 1 2.3881 -7.9997 -7.6118 16 6 3.9301 -8.4548 -9.1319 17 6 4.2339 -9.7290 -8.3264 18 1 5.1621 -10.2198 -8.6192 19 7 3.1019 -10.6554 -8.2446 20 6 2.0969 -10.6228 -7.3524 21 7 1.2878 -11.6166 -7.6157 22 6 1.7453 -12.3077 -8.6590 23 7 2.8543 -11.7577 -9.0790 24 6 4.3756 -8.8209 -7.0913 25 6 3.1876 -0.6861 -3.2694 26 35 4.2741 0.2350 -4.5132 27 6 2.7209 -0.0351 -2.1433 28 1 -0.3934 0.4418 -0.7650 29 1 1.7923 -0.5138 0.8899 30 1 1.5616 2.4678 1.2086 31 1 3.5346 1.7703 -0.0322 32 1 0.9758 -2.5573 -0.7361 33 1 1.7928 -3.7214 -2.7455 34 1 3.2881 -4.6060 -3.9159 35 1 1.8344 -4.0926 -4.8057 36 1 2.7358 -6.4135 -5.8372 37 1 3.4914 -5.7843 -8.4849 38 1 4.9439 -6.2984 -7.5938 39 1 3.1388 -8.5832 -9.8704 40 1 4.8181 -7.9740 -9.5424 41 1 1.9770 -9.9006 -6.5584 42 1 1.2764 -13.1810 -9.0877 43 1 5.3864 -8.4414 -6.9421 44 1 3.9434 -9.2446 -6.1848 45 1 2.9772 1.0001 -1.9734 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946164_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:07:16 Heat of formation + Delta-G solvation = 61.718097 kcal Electronic energy + Delta-G solvation = -30493.531840 eV Core-core repulsion = 25949.021739 eV Total energy + Delta-G solvation = -4544.510101 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.063 amu Computer time = 0.88 seconds Orbital eigenvalues (eV) -43.20499 -41.66310 -40.83189 -40.00375 -39.03619 -37.20570 -35.79979 -33.50725 -33.31176 -32.19594 -32.10323 -30.78016 -30.03159 -28.26848 -26.94252 -26.33782 -25.05856 -23.91613 -23.06561 -22.47525 -22.33476 -21.70692 -20.60008 -19.53352 -18.59785 -18.14606 -17.85139 -17.53356 -17.26544 -17.02208 -16.63045 -16.45347 -16.24424 -16.07937 -15.92532 -15.68028 -15.51608 -15.36286 -14.98989 -14.77596 -14.67132 -14.27468 -14.12124 -13.96190 -13.78996 -13.48191 -13.39218 -13.20361 -12.97706 -12.41004 -12.23568 -12.16874 -12.12591 -11.85429 -11.85101 -11.73546 -11.62933 -11.19111 -11.03835 -10.97782 -10.85322 -10.56436 -10.45571 -10.17110 -9.98135 -9.29344 -5.02949 -0.01788 0.09953 0.63195 0.65236 1.29376 1.29494 1.43623 1.49033 1.59552 1.93455 1.96270 2.41823 2.51947 3.10778 3.28515 3.45079 3.48035 3.50422 3.56579 3.60271 3.67787 3.80848 3.88209 3.90007 4.06132 4.09425 4.10943 4.13231 4.17813 4.36123 4.39711 4.47452 4.53973 4.63953 4.68816 4.69660 4.76655 4.80526 4.90875 4.92820 5.05341 5.14774 5.31733 5.31989 5.36027 5.42766 5.48272 5.92201 6.07744 6.47609 6.78140 7.08579 7.16878 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.550 6.550 2 C -0.052 4.052 3 Si 0.743 3.257 4 C -0.152 4.152 5 C -0.034 4.034 6 C -0.194 4.194 7 C 0.150 3.850 8 O -0.305 6.305 9 C 0.032 3.968 10 C 0.511 3.489 11 O -0.570 6.570 12 N -0.707 5.707 13 C 0.134 3.866 14 C -0.113 4.113 15 H 0.113 0.887 16 C -0.134 4.134 17 C 0.115 3.885 18 H 0.112 0.888 19 N -0.363 5.363 20 C 0.258 3.742 21 N -0.578 5.578 22 C 0.189 3.811 23 N -0.354 5.354 24 C -0.121 4.121 25 C -0.140 4.140 26 Br -0.050 7.050 27 C -0.056 4.056 28 H 0.396 0.604 29 H 0.118 0.882 30 H -0.293 1.293 31 H -0.289 1.289 32 H 0.156 0.844 33 H 0.175 0.825 34 H 0.130 0.870 35 H 0.130 0.870 36 H 0.422 0.578 37 H 0.057 0.943 38 H 0.070 0.930 39 H 0.063 0.937 40 H 0.118 0.882 41 H 0.257 0.743 42 H 0.235 0.765 43 H 0.124 0.876 44 H 0.102 0.898 45 H 0.145 0.855 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -3.016 -2.608 3.277 5.161 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.358 6.358 2 C -0.164 4.164 3 Si 0.650 3.350 4 C -0.153 4.153 5 C -0.052 4.052 6 C -0.213 4.213 7 C 0.102 3.898 8 O -0.217 6.217 9 C -0.046 4.046 10 C 0.297 3.703 11 O -0.448 6.448 12 N -0.362 5.362 13 C 0.011 3.989 14 C -0.132 4.132 15 H 0.131 0.869 16 C -0.173 4.173 17 C 0.013 3.987 18 H 0.130 0.870 19 N -0.154 5.154 20 C -0.038 4.038 21 N -0.306 5.306 22 C -0.113 4.113 23 N -0.182 5.182 24 C -0.159 4.159 25 C -0.220 4.220 26 Br 0.035 6.965 27 C -0.075 4.075 28 H 0.246 0.754 29 H 0.136 0.864 30 H -0.221 1.221 31 H -0.216 1.216 32 H 0.173 0.827 33 H 0.192 0.808 34 H 0.148 0.852 35 H 0.147 0.853 36 H 0.260 0.740 37 H 0.075 0.925 38 H 0.089 0.911 39 H 0.082 0.918 40 H 0.136 0.864 41 H 0.272 0.728 42 H 0.251 0.749 43 H 0.142 0.858 44 H 0.120 0.880 45 H 0.162 0.838 Dipole moment (debyes) X Y Z Total from point charges -1.237 -1.698 2.639 3.373 hybrid contribution -0.126 -0.844 0.400 0.943 sum -1.362 -2.542 3.039 4.190 Atomic orbital electron populations 1.86475 1.16759 1.81956 1.50631 1.24808 0.85428 1.09184 0.96957 0.93988 0.78410 0.77110 0.85452 1.20292 1.01305 0.96056 0.97675 1.21206 0.95148 0.92928 0.95904 1.21613 1.01606 1.02632 0.95419 1.18793 0.93503 0.90612 0.86876 1.86243 1.70270 1.25803 1.39394 1.22864 1.02997 0.81350 0.97376 1.20466 0.80449 0.82486 0.86900 1.90804 1.39968 1.58910 1.55142 1.45604 1.53868 1.11192 1.25506 1.21301 0.98684 0.93010 0.85913 1.22867 1.01176 0.92396 0.96714 0.86929 1.23369 1.03303 0.93962 0.96660 1.22487 0.86823 0.88078 1.01353 0.86967 1.50385 1.20707 1.21416 1.22844 1.26723 0.84202 0.97496 0.95384 1.70595 1.31730 1.09354 1.18938 1.26523 0.91301 1.00742 0.92744 1.78040 1.20488 1.01334 1.18320 1.23570 1.02916 0.93506 0.95875 1.21138 1.07573 0.94105 0.99216 1.96775 1.66553 1.75279 1.57902 1.20916 0.95612 0.99735 0.91280 0.75391 0.86434 1.22078 1.21604 0.82686 0.80811 0.85201 0.85255 0.73975 0.92457 0.91126 0.91818 0.86423 0.72778 0.74938 0.85769 0.87956 0.83774 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 1.99 12.77 -148.98 -1.90 0.09 16 2 C -0.05 0.19 2.82 71.24 0.20 0.39 16 3 Si 0.74 -1.68 29.78 68.60 2.04 0.37 16 4 C -0.15 0.46 5.39 -19.85 -0.11 0.36 16 5 C -0.03 0.18 9.60 22.26 0.21 0.40 16 6 C -0.19 1.19 9.04 22.36 0.20 1.40 16 7 C 0.15 0.07 6.68 22.52 0.15 0.22 16 8 O -0.30 -0.76 9.01 -73.58 -0.66 -1.42 16 9 C 0.03 -0.24 5.22 71.23 0.37 0.13 16 10 C 0.51 -0.99 7.91 87.65 0.69 -0.30 16 11 O -0.57 -6.12 16.50 15.99 0.26 -5.85 16 12 N -0.71 7.31 5.56 -463.08 -2.57 4.74 16 13 C 0.13 -1.15 5.50 86.38 0.47 -0.68 16 14 C -0.11 1.47 3.34 -10.26 -0.03 1.43 16 15 H 0.11 -1.67 7.05 -2.39 -0.02 -1.69 16 16 C -0.13 1.17 7.44 31.12 0.23 1.40 16 17 C 0.12 -0.88 5.22 45.57 0.24 -0.64 16 18 H 0.11 -0.74 8.14 -2.39 -0.02 -0.76 16 19 N -0.36 0.56 3.81 -328.65 -1.25 -0.70 16 20 C 0.26 -0.94 10.82 180.36 1.95 1.02 16 21 N -0.58 -1.98 11.19 -204.00 -2.28 -4.26 16 22 C 0.19 0.70 13.03 180.76 2.36 3.05 16 23 N -0.35 -1.92 12.70 -61.24 -0.78 -2.70 16 24 C -0.12 1.74 6.90 31.18 0.22 1.95 16 25 C -0.14 -0.46 6.24 22.40 0.14 -0.32 16 26 Br -0.05 -0.35 33.16 -20.37 -0.68 -1.03 16 27 C -0.06 0.01 8.40 22.27 0.19 0.20 16 28 H 0.40 -4.33 8.70 -74.05 -0.64 -4.98 16 29 H 0.12 -0.42 7.96 -2.39 -0.02 -0.44 16 30 H -0.29 -1.43 7.11 99.48 0.71 -0.73 16 31 H -0.29 -1.01 7.11 99.48 0.71 -0.30 16 32 H 0.16 -1.36 8.06 -2.91 -0.02 -1.39 16 33 H 0.17 -2.43 6.30 -2.91 -0.02 -2.45 16 34 H 0.13 -1.89 7.66 -2.39 -0.02 -1.90 16 35 H 0.13 -1.85 7.66 -2.38 -0.02 -1.86 16 36 H 0.42 -7.83 8.47 -92.71 -0.79 -8.61 16 37 H 0.06 -0.23 8.14 -2.39 -0.02 -0.25 16 38 H 0.07 -0.47 7.87 -2.39 -0.02 -0.49 16 39 H 0.06 -0.27 8.14 -2.39 -0.02 -0.29 16 40 H 0.12 -1.20 8.10 -2.39 -0.02 -1.22 16 41 H 0.26 -3.67 6.75 -2.91 -0.02 -3.69 16 42 H 0.23 -0.51 8.06 -2.91 -0.02 -0.53 16 43 H 0.12 -1.93 7.92 -2.39 -0.02 -1.95 16 44 H 0.10 -1.78 7.01 -2.39 -0.02 -1.80 16 45 H 0.15 -0.28 4.87 -2.91 -0.01 -0.29 16 Total: 0.00 -35.71 399.11 -0.65 -36.37 By element: Atomic # 1 Polarization: -35.30 SS G_CDS: -0.32 Total: -35.62 kcal Atomic # 6 Polarization: 2.53 SS G_CDS: 7.48 Total: 10.01 kcal Atomic # 7 Polarization: 3.97 SS G_CDS: -6.89 Total: -2.92 kcal Atomic # 8 Polarization: -4.88 SS G_CDS: -2.30 Total: -7.18 kcal Atomic # 14 Polarization: -1.68 SS G_CDS: 2.04 Total: 0.37 kcal Atomic # 35 Polarization: -0.35 SS G_CDS: -0.68 Total: -1.03 kcal Total: -35.71 -0.65 -36.37 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946164_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 98.086 kcal (2) G-P(sol) polarization free energy of solvation -35.714 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 62.372 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.654 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -36.368 kcal (6) G-S(sol) free energy of system = (1) + (5) 61.718 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.88 seconds