Wall clock time and date at job start Tue Mar 9 2021 12:52:43 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86295 * 109.47411 * 2 1 4 4 C 1.50697 * 109.46962 * 239.99815 * 2 1 3 5 5 C 1.38271 * 119.94780 * 299.99979 * 4 2 1 6 6 C 1.38139 * 120.05605 * 180.02562 * 5 4 2 7 7 C 1.38731 * 119.94745 * 0.02562 * 6 5 4 8 8 O 1.35893 * 120.05698 * 180.02562 * 7 6 5 9 9 C 1.42901 * 117.00450 * 180.02562 * 8 7 6 10 10 C 1.50693 * 109.47480 * 180.02562 * 9 8 7 11 11 O 1.21276 * 120.00503 * 359.97438 * 10 9 8 12 12 N 1.34782 * 119.99778 * 180.02562 * 10 9 8 13 13 C 1.46503 * 119.99635 * 179.97438 * 12 10 9 14 14 C 1.53003 * 109.46818 * 179.97438 * 13 12 10 15 15 H 1.09002 * 112.85017 * 45.33137 * 14 13 12 16 16 C 1.53786 * 113.61503 * 176.52755 * 14 13 12 17 17 C 1.53783 * 87.08050 * 140.06140 * 16 14 13 18 18 H 1.08993 * 113.61424 * 220.01734 * 17 16 14 19 19 N 1.46499 * 113.61210 * 89.20097 * 17 16 14 20 20 C 1.35314 * 125.87018 * 275.00334 * 19 17 16 21 21 C 1.35345 * 106.17523 * 180.02562 * 20 19 17 22 22 N 1.33773 * 106.49911 * 359.97438 * 21 20 19 23 23 N 1.28630 * 108.88203 * 359.73803 * 22 21 20 24 24 C 1.53781 * 113.61337 * 274.13548 * 14 13 12 25 25 C 1.38728 * 119.88720 * 0.27726 * 7 6 5 26 26 C 1.38152 * 119.94282 * 359.46763 * 25 7 6 27 27 H 0.96703 * 114.00023 * 60.00106 * 1 2 3 28 28 H 1.09004 * 109.46905 * 120.00370 * 2 1 3 29 29 H 1.48506 * 110.00020 * 59.99771 * 3 2 1 30 30 H 1.48501 * 110.00244 * 181.31981 * 3 2 1 31 31 H 1.08004 * 119.96697 * 0.02585 * 5 4 2 32 32 H 1.08003 * 120.02683 * 179.97438 * 6 5 4 33 33 H 1.09007 * 109.47147 * 59.99876 * 9 8 7 34 34 H 1.09003 * 109.46825 * 300.00521 * 9 8 7 35 35 H 0.96996 * 120.00351 * 359.97438 * 12 10 9 36 36 H 1.08997 * 109.47388 * 60.00196 * 13 12 10 37 37 H 1.09004 * 109.47244 * 299.99375 * 13 12 10 38 38 H 1.08992 * 113.61675 * 254.61398 * 16 14 13 39 39 H 1.09005 * 113.61030 * 25.43048 * 16 14 13 40 40 H 1.08000 * 126.91045 * 359.97438 * 20 19 17 41 41 H 1.08001 * 126.75313 * 179.97438 * 21 20 19 42 42 H 1.08999 * 113.61567 * 334.48261 * 24 14 13 43 43 H 1.08998 * 113.61196 * 105.38615 * 24 14 13 44 44 H 1.07998 * 120.02794 * 179.72219 * 25 7 6 45 45 H 1.08000 * 119.96837 * 180.28064 * 26 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 -1.2304 5 6 1.5965 -2.0342 -1.4481 6 6 2.0562 -2.6878 -2.5750 7 6 2.8547 -2.0151 -3.4884 8 8 3.3077 -2.6557 -4.5980 9 6 4.1255 -1.9011 -5.4945 10 6 4.5296 -2.7696 -6.6577 11 8 4.1547 -3.9216 -6.7135 12 7 5.3087 -2.2664 -7.6358 13 6 5.7020 -3.1110 -8.7664 14 6 6.5776 -2.3029 -9.7262 15 1 7.3444 -1.7227 -9.2129 16 6 7.1158 -3.1249 -10.9093 17 6 6.8456 -1.8916 -11.7873 18 1 6.4371 -2.1348 -12.7680 19 7 7.9754 -0.9616 -11.8563 20 6 8.2505 0.0194 -10.9658 21 6 9.3728 0.6300 -11.4121 22 7 9.7253 0.0008 -12.5388 23 7 8.8804 -0.9409 -12.7714 24 6 5.7750 -1.4893 -10.7552 25 6 3.1943 -0.6887 -3.2646 26 6 2.7278 -0.0380 -2.1388 27 1 -0.3933 0.4417 -0.7651 28 1 1.7923 -0.5139 0.8900 29 1 1.5615 2.4679 1.2085 30 1 3.5346 1.7702 -0.0321 31 1 0.9752 -2.5577 -0.7364 32 1 1.7948 -3.7220 -2.7443 33 1 5.0173 -1.5569 -4.9705 34 1 3.5650 -1.0411 -5.8611 35 1 5.6089 -1.3452 -7.5911 36 1 4.8104 -3.4548 -9.2906 37 1 6.2624 -3.9712 -8.3997 38 1 8.1729 -3.3756 -10.8219 39 1 6.4960 -3.9857 -11.1607 40 1 7.6872 0.2660 -10.0779 41 1 9.8835 1.4618 -10.9497 42 1 4.7887 -1.9028 -10.9655 43 1 5.7506 -0.4204 -10.5433 44 1 3.8195 -0.1642 -3.9719 45 1 2.9882 0.9959 -1.9664 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946166_2989410.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:43 Heat of formation + Delta-G solvation = 65.696484 kcal Electronic energy + Delta-G solvation = -28356.769354 eV Core-core repulsion = 24152.249772 eV Total energy + Delta-G solvation = -4204.519583 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 345.152 amu Computer time = 0.81 seconds Orbital eigenvalues (eV) -44.37804 -41.67093 -41.04516 -40.24173 -39.02184 -37.18491 -36.01978 -34.03048 -32.51690 -32.06315 -31.82569 -30.71903 -28.62245 -27.39074 -26.30068 -25.32669 -24.02651 -23.62920 -22.81996 -22.46106 -21.85222 -20.98254 -19.60326 -18.79820 -18.34235 -18.16977 -17.66217 -17.48885 -17.24556 -16.90820 -16.55844 -16.39499 -16.22279 -15.96096 -15.73053 -15.62002 -15.44374 -15.04420 -14.89700 -14.74140 -14.31104 -14.16482 -13.99956 -13.82770 -13.68313 -13.57647 -13.35822 -12.77449 -12.53123 -12.30192 -12.21336 -12.19892 -12.10333 -12.07830 -11.83541 -11.78092 -11.13075 -11.00200 -10.47223 -10.41253 -10.40093 -10.11432 -9.28368 -5.10709 0.22180 0.23200 0.53241 1.15765 1.24676 1.28443 1.33838 1.56071 1.60163 1.92035 2.37137 2.59650 2.67042 2.84945 3.08639 3.21992 3.34558 3.43122 3.44254 3.59645 3.65076 3.73365 3.76069 3.78650 3.80870 3.83938 3.99516 4.06763 4.15610 4.18753 4.19921 4.26314 4.37120 4.39775 4.44759 4.45666 4.53105 4.58109 4.69838 4.75973 4.88413 5.05587 5.08932 5.14016 5.17691 5.44328 5.53688 5.60849 6.06721 6.24015 6.54176 6.91898 7.51206 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.541 6.541 2 C -0.064 4.064 3 Si 0.687 3.313 4 C -0.157 4.157 5 C -0.051 4.051 6 C -0.145 4.145 7 C 0.133 3.867 8 O -0.288 6.288 9 C 0.040 3.960 10 C 0.515 3.485 11 O -0.510 6.510 12 N -0.728 5.728 13 C 0.132 3.868 14 C -0.130 4.130 15 H 0.103 0.897 16 C -0.130 4.130 17 C 0.111 3.889 18 H 0.127 0.873 19 N -0.274 5.274 20 C -0.053 4.053 21 C -0.049 4.049 22 N -0.270 5.270 23 N -0.081 5.081 24 C -0.135 4.135 25 C -0.206 4.206 26 C -0.076 4.076 27 H 0.379 0.621 28 H 0.113 0.887 29 H -0.255 1.255 30 H -0.259 1.259 31 H 0.135 0.865 32 H 0.136 0.864 33 H 0.095 0.905 34 H 0.096 0.904 35 H 0.402 0.598 36 H 0.077 0.923 37 H 0.076 0.924 38 H 0.085 0.915 39 H 0.115 0.885 40 H 0.188 0.812 41 H 0.191 0.809 42 H 0.116 0.884 43 H 0.086 0.914 44 H 0.131 0.869 45 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.054 4.752 0.063 5.178 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.346 6.346 2 C -0.175 4.175 3 Si 0.589 3.411 4 C -0.157 4.157 5 C -0.069 4.069 6 C -0.163 4.163 7 C 0.088 3.912 8 O -0.201 6.201 9 C -0.039 4.039 10 C 0.300 3.700 11 O -0.383 6.383 12 N -0.383 5.383 13 C 0.009 3.991 14 C -0.149 4.149 15 H 0.121 0.879 16 C -0.169 4.169 17 C 0.008 3.992 18 H 0.145 0.855 19 N -0.068 5.068 20 C -0.204 4.204 21 C -0.206 4.206 22 N -0.135 5.135 23 N -0.060 5.060 24 C -0.173 4.173 25 C -0.225 4.225 26 C -0.094 4.094 27 H 0.226 0.774 28 H 0.130 0.870 29 H -0.180 1.180 30 H -0.184 1.184 31 H 0.153 0.847 32 H 0.154 0.846 33 H 0.113 0.887 34 H 0.114 0.886 35 H 0.236 0.764 36 H 0.096 0.904 37 H 0.094 0.906 38 H 0.104 0.896 39 H 0.133 0.867 40 H 0.205 0.795 41 H 0.208 0.792 42 H 0.134 0.866 43 H 0.105 0.895 44 H 0.149 0.851 45 H 0.147 0.853 Dipole moment (debyes) X Y Z Total from point charges -1.291 3.315 -0.381 3.578 hybrid contribution -0.005 0.589 1.187 1.325 sum -1.297 3.904 0.806 4.192 Atomic orbital electron populations 1.86506 1.17161 1.81684 1.49264 1.24983 0.85204 1.09883 0.97408 0.94828 0.80787 0.78153 0.87300 1.20265 1.01771 0.95605 0.98069 1.20866 0.96774 0.93411 0.95833 1.20541 1.00373 1.01274 0.94155 1.19066 0.94352 0.91097 0.86711 1.86172 1.64210 1.38644 1.31041 1.22460 0.96436 0.94531 0.90441 1.20041 0.78794 0.88092 0.83083 1.90805 1.52951 1.17593 1.76975 1.45764 1.53056 1.16171 1.23290 1.21371 0.98588 0.93278 0.85862 1.23014 0.98477 0.98248 0.95137 0.87900 1.23343 1.03824 0.96454 0.93272 1.22561 0.84392 0.89810 1.02420 0.85472 1.47186 1.19835 1.23002 1.16733 1.23573 1.01826 0.94956 1.00034 1.23692 0.97291 1.03896 0.95730 1.75191 1.19652 1.03712 1.14979 1.78393 0.97215 1.17599 1.12782 1.23585 0.98095 1.02082 0.93569 1.21160 1.06174 0.94241 1.00911 1.20793 0.96228 0.99069 0.93280 0.77379 0.86952 1.17979 1.18389 0.84716 0.84622 0.88726 0.88615 0.76353 0.90434 0.90561 0.89611 0.86679 0.79513 0.79209 0.86580 0.89544 0.85080 0.85299 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 0.11 12.77 -35.23 -0.45 -0.34 16 2 C -0.06 0.05 2.82 36.00 0.10 0.15 16 3 Si 0.69 -1.19 29.78 -169.99 -5.06 -6.26 16 4 C -0.16 0.07 5.39 -104.60 -0.56 -0.50 16 5 C -0.05 -0.02 9.60 -39.61 -0.38 -0.40 16 6 C -0.14 -0.14 9.99 -39.44 -0.39 -0.53 16 7 C 0.13 0.10 6.69 -39.22 -0.26 -0.17 16 8 O -0.29 -0.46 9.67 -39.31 -0.38 -0.84 16 9 C 0.04 -0.10 5.22 36.00 0.19 0.08 16 10 C 0.52 -0.32 7.91 -10.99 -0.09 -0.41 16 11 O -0.51 -2.42 16.50 -14.35 -0.24 -2.66 16 12 N -0.73 3.22 5.56 -60.29 -0.33 2.89 16 13 C 0.13 -0.56 5.50 -4.04 -0.02 -0.58 16 14 C -0.13 0.78 3.33 -89.80 -0.30 0.49 16 15 H 0.10 -0.65 6.98 -51.93 -0.36 -1.02 16 16 C -0.13 0.62 7.44 -25.92 -0.19 0.43 16 17 C 0.11 -0.44 5.11 -66.97 -0.34 -0.78 16 18 H 0.13 -0.54 8.14 -51.93 -0.42 -0.96 16 19 N -0.27 0.18 3.52 -53.84 -0.19 -0.01 16 20 C -0.05 0.12 9.69 -17.05 -0.17 -0.05 16 21 C -0.05 -0.01 12.05 -17.74 -0.21 -0.22 16 22 N -0.27 -1.14 12.41 30.23 0.38 -0.76 16 23 N -0.08 -0.29 13.16 60.35 0.79 0.51 16 24 C -0.14 0.87 6.90 -25.78 -0.18 0.70 16 25 C -0.21 0.29 9.04 -39.43 -0.36 -0.07 16 26 C -0.08 0.11 8.66 -39.60 -0.34 -0.24 16 27 H 0.38 -1.54 8.70 45.56 0.40 -1.14 16 28 H 0.11 -0.03 7.96 -51.93 -0.41 -0.44 16 29 H -0.25 -0.44 7.11 56.52 0.40 -0.04 16 30 H -0.26 -0.11 7.11 56.52 0.40 0.29 16 31 H 0.13 -0.05 8.06 -52.48 -0.42 -0.47 16 32 H 0.14 0.08 8.06 -52.48 -0.42 -0.34 16 33 H 0.09 -0.47 7.65 -51.93 -0.40 -0.87 16 34 H 0.10 -0.52 7.67 -51.93 -0.40 -0.92 16 35 H 0.40 -3.11 8.47 -40.82 -0.35 -3.46 16 36 H 0.08 -0.28 7.87 -51.93 -0.41 -0.69 16 37 H 0.08 -0.20 8.14 -51.93 -0.42 -0.62 16 38 H 0.09 -0.26 8.14 -51.93 -0.42 -0.68 16 39 H 0.11 -0.68 8.10 -51.93 -0.42 -1.10 16 40 H 0.19 -1.21 6.75 -52.49 -0.35 -1.56 16 41 H 0.19 -0.55 8.06 -52.49 -0.42 -0.97 16 42 H 0.12 -0.83 7.92 -51.93 -0.41 -1.24 16 43 H 0.09 -0.61 7.00 -51.93 -0.36 -0.97 16 44 H 0.13 -0.57 6.30 -52.49 -0.33 -0.90 16 45 H 0.13 -0.44 4.87 -52.49 -0.26 -0.69 16 LS Contribution 377.77 15.07 5.69 5.69 Total: 0.00 -13.56 377.77 -9.10 -22.66 By element: Atomic # 1 Polarization: -12.99 SS G_CDS: -5.80 Total: -18.79 kcal Atomic # 6 Polarization: 1.42 SS G_CDS: -3.51 Total: -2.09 kcal Atomic # 7 Polarization: 1.97 SS G_CDS: 0.65 Total: 2.62 kcal Atomic # 8 Polarization: -2.77 SS G_CDS: -1.07 Total: -3.83 kcal Atomic # 14 Polarization: -1.19 SS G_CDS: -5.06 Total: -6.26 kcal Total LS contribution 5.69 Total: 5.69 kcal Total: -13.56 -9.10 -22.66 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_2989410.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 88.356 kcal (2) G-P(sol) polarization free energy of solvation -13.558 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 74.798 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.102 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -22.659 kcal (6) G-S(sol) free energy of system = (1) + (5) 65.696 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.81 seconds