Wall clock time and date at job start Tue Mar 9 2021 12:52:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47081 * 2 1 4 4 C 1.50702 * 109.46701 * 119.99835 * 2 1 3 5 5 C 1.38248 * 119.97291 * 245.02113 * 4 2 1 6 6 C 1.38283 * 120.11168 * 179.97438 * 5 4 2 7 7 C 1.38123 * 120.05639 * 359.76607 * 6 5 4 8 8 C 1.38751 * 119.94246 * 0.50856 * 7 6 5 9 9 O 1.35899 * 120.05438 * 179.74831 * 8 7 6 10 10 C 1.42904 * 117.00335 * 359.72231 * 9 8 7 11 11 C 1.52994 * 109.47298 * 180.02562 * 10 9 8 12 12 C 1.50705 * 109.46947 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00052 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00051 * 179.97438 * 12 11 10 15 15 C 1.46502 * 120.00161 * 180.02562 * 14 12 11 16 16 C 1.52994 * 109.47057 * 180.02562 * 15 14 12 17 17 H 1.09002 * 112.90771 * 316.25090 * 16 15 14 18 18 C 1.53779 * 113.61529 * 87.50494 * 16 15 14 19 19 C 1.53779 * 87.08402 * 139.98073 * 18 16 15 20 20 H 1.08997 * 113.61646 * 220.02209 * 19 18 16 21 21 N 1.46499 * 113.61746 * 89.11614 * 19 18 16 22 22 C 1.35312 * 125.86246 * 347.50349 * 21 19 18 23 23 C 1.35356 * 106.16904 * 179.97438 * 22 21 19 24 24 N 1.33767 * 106.49966 * 0.02562 * 23 22 21 25 25 N 1.28632 * 108.88308 * 359.73754 * 24 23 22 26 26 C 1.53784 * 113.61233 * 185.00081 * 16 15 14 27 27 C 1.38167 * 119.97609 * 65.00030 * 4 2 1 28 28 H 0.96706 * 114.00122 * 60.00248 * 1 2 3 29 29 H 1.08991 * 109.47100 * 239.99455 * 2 1 3 30 30 H 1.48500 * 109.99954 * 298.67844 * 3 2 1 31 31 H 1.48494 * 110.00166 * 60.00039 * 3 2 1 32 32 H 1.08000 * 119.94170 * 359.97438 * 5 4 2 33 33 H 1.08005 * 119.97007 * 180.02562 * 6 5 4 34 34 H 1.08003 * 120.02612 * 180.28313 * 7 6 5 35 35 H 1.09007 * 109.46845 * 60.00009 * 10 9 8 36 36 H 1.09003 * 109.47208 * 300.00679 * 10 9 8 37 37 H 1.08994 * 109.47510 * 60.00415 * 11 10 9 38 38 H 1.09001 * 109.47575 * 299.99864 * 11 10 9 39 39 H 0.97005 * 119.99592 * 0.02562 * 14 12 11 40 40 H 1.08994 * 109.46583 * 60.00367 * 15 14 12 41 41 H 1.09001 * 109.46856 * 300.00825 * 15 14 12 42 42 H 1.09006 * 113.61307 * 25.43275 * 18 16 15 43 43 H 1.09007 * 113.61642 * 254.53032 * 18 16 15 44 44 H 1.07993 * 126.91821 * 359.97438 * 22 21 19 45 45 H 1.08000 * 126.74916 * 179.97438 * 23 22 21 46 46 H 1.09004 * 113.61451 * 105.47254 * 26 16 15 47 47 H 1.08994 * 113.61477 * 334.56556 * 26 16 15 48 48 H 1.08010 * 120.02470 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.6382 -0.0116 2.1913 6 6 3.0999 -0.6604 3.3218 7 6 2.8515 -2.0079 3.4960 8 6 2.1471 -2.7128 2.5305 9 8 1.9058 -4.0398 2.6972 10 6 2.4119 -4.6467 3.8879 11 6 2.0454 -6.1321 3.8987 12 6 2.5796 -6.7722 5.1541 13 8 3.1928 -6.1058 5.9609 14 7 2.3752 -8.0849 5.3807 15 6 2.8941 -8.7071 6.6013 16 6 2.5276 -10.1925 6.6120 17 1 1.4986 -10.3779 6.3040 18 6 3.5551 -11.0857 5.8970 19 6 3.3427 -12.1028 7.0306 20 1 4.2618 -12.5867 7.3610 21 7 2.2593 -13.0539 6.7705 22 6 1.3338 -12.9521 5.7886 23 6 0.5328 -14.0362 5.9117 24 7 1.0008 -14.7385 6.9495 25 7 2.0272 -14.1326 7.4332 26 6 2.9213 -10.9147 7.9114 27 6 1.6844 -2.0595 1.3979 28 1 -0.3934 0.4417 -0.7651 29 1 1.7923 -0.5139 -0.8899 30 1 1.5879 2.4585 -1.2243 31 1 1.5615 2.4679 1.2084 32 1 2.8302 1.0429 2.0586 33 1 3.6517 -0.1122 4.0711 34 1 3.2084 -2.5132 4.3813 35 1 1.9750 -4.1579 4.7588 36 1 3.4963 -4.5402 3.9174 37 1 2.4825 -6.6206 3.0279 38 1 0.9610 -6.2390 3.8690 39 1 1.8845 -8.6178 4.7355 40 1 2.4571 -8.2184 7.4721 41 1 3.9784 -8.6004 6.6308 42 1 4.5594 -10.6625 5.8725 43 1 3.2209 -11.4419 4.9225 44 1 1.2509 -12.1644 5.0544 45 1 -0.3176 -14.2847 5.2941 46 1 2.0753 -11.1329 8.5632 47 1 3.7522 -10.4448 8.4376 48 1 1.1313 -2.6049 0.6473 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946166_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:50 Heat of formation + Delta-G solvation = 57.835002 kcal Electronic energy + Delta-G solvation = -29933.649562 eV Core-core repulsion = 25573.251461 eV Total energy + Delta-G solvation = -4360.398101 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 0.91 seconds Orbital eigenvalues (eV) -44.36078 -41.44359 -41.07477 -40.30192 -39.02189 -37.41203 -36.02465 -34.04307 -33.37222 -32.55306 -32.03999 -30.92334 -29.45999 -27.37724 -27.01548 -25.88690 -24.63997 -23.61048 -23.60608 -22.77132 -22.02042 -21.55838 -20.90638 -19.19176 -18.54717 -18.41861 -17.98144 -17.71225 -17.58685 -17.27881 -17.13981 -16.91587 -16.53498 -16.28659 -15.83942 -15.77820 -15.58839 -15.45627 -15.16833 -14.76226 -14.51101 -14.43547 -14.27879 -13.98723 -13.93042 -13.87489 -13.51447 -13.37664 -12.98195 -12.94723 -12.75095 -12.50734 -12.33892 -12.20550 -12.05637 -11.92709 -11.81772 -11.81019 -11.61818 -11.15658 -11.01627 -10.53641 -10.39099 -10.34638 -9.85703 -9.19099 -4.96672 0.26823 0.47361 0.55236 1.17672 1.25252 1.41046 1.57444 1.60768 1.62166 1.94620 2.35187 2.67889 2.70385 2.87040 3.12025 3.24785 3.34283 3.43776 3.46694 3.70321 3.75861 3.78174 3.85080 3.86896 3.90643 4.02665 4.09306 4.10294 4.17167 4.21201 4.22151 4.24560 4.28787 4.29658 4.41110 4.44682 4.47136 4.52914 4.56206 4.60970 4.71732 4.71942 4.78669 5.02540 5.13596 5.16232 5.31084 5.43635 5.52457 5.55692 5.72424 6.17403 6.40087 6.41944 6.95608 7.53086 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.077 4.077 3 Si 0.687 3.313 4 C -0.036 4.036 5 C -0.152 4.152 6 C -0.073 4.073 7 C -0.202 4.202 8 C 0.131 3.869 9 O -0.317 6.317 10 C 0.074 3.926 11 C -0.141 4.141 12 C 0.520 3.480 13 O -0.536 6.536 14 N -0.729 5.729 15 C 0.130 3.870 16 C -0.130 4.130 17 H 0.103 0.897 18 C -0.136 4.136 19 C 0.111 3.889 20 H 0.127 0.873 21 N -0.274 5.274 22 C -0.053 4.053 23 C -0.049 4.049 24 N -0.270 5.270 25 N -0.081 5.081 26 C -0.130 4.130 27 C -0.124 4.124 28 H 0.380 0.620 29 H 0.078 0.922 30 H -0.261 1.261 31 H -0.255 1.255 32 H 0.129 0.871 33 H 0.131 0.869 34 H 0.133 0.867 35 H 0.072 0.928 36 H 0.073 0.927 37 H 0.108 0.892 38 H 0.107 0.893 39 H 0.403 0.597 40 H 0.075 0.925 41 H 0.076 0.924 42 H 0.116 0.884 43 H 0.086 0.914 44 H 0.188 0.812 45 H 0.191 0.809 46 H 0.085 0.915 47 H 0.114 0.886 48 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.789 1.837 -4.319 5.459 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.187 4.187 3 Si 0.588 3.412 4 C -0.036 4.036 5 C -0.170 4.170 6 C -0.091 4.091 7 C -0.221 4.221 8 C 0.086 3.914 9 O -0.231 6.231 10 C -0.001 4.001 11 C -0.181 4.181 12 C 0.307 3.693 13 O -0.413 6.413 14 N -0.382 5.382 15 C 0.007 3.993 16 C -0.149 4.149 17 H 0.121 0.879 18 C -0.174 4.174 19 C 0.008 3.992 20 H 0.145 0.855 21 N -0.068 5.068 22 C -0.204 4.204 23 C -0.206 4.206 24 N -0.135 5.135 25 N -0.060 5.060 26 C -0.169 4.169 27 C -0.143 4.143 28 H 0.228 0.772 29 H 0.096 0.904 30 H -0.187 1.187 31 H -0.180 1.180 32 H 0.146 0.854 33 H 0.149 0.851 34 H 0.150 0.850 35 H 0.091 0.909 36 H 0.091 0.909 37 H 0.126 0.874 38 H 0.126 0.874 39 H 0.237 0.763 40 H 0.093 0.907 41 H 0.094 0.906 42 H 0.134 0.866 43 H 0.104 0.896 44 H 0.205 0.795 45 H 0.208 0.792 46 H 0.104 0.896 47 H 0.133 0.867 48 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.476 1.800 -2.097 4.441 hybrid contribution -1.627 0.271 -1.587 2.289 sum 1.848 2.071 -3.684 4.613 Atomic orbital electron populations 1.86602 1.17653 1.80202 1.49766 1.24836 0.84596 1.11124 0.98126 0.94920 0.91704 0.74364 0.80163 1.19001 0.96983 0.92831 0.94784 1.20917 1.01571 0.99761 0.94766 1.20904 0.97654 0.93675 0.96865 1.21381 1.04264 0.95975 1.00447 1.18904 0.95329 0.82600 0.94529 1.85965 1.74540 1.20324 1.42221 1.22407 0.99711 0.91728 0.86303 1.21465 1.04283 0.95174 0.97218 1.20312 0.79537 0.81952 0.87540 1.90769 1.40677 1.62382 1.47427 1.45922 1.58486 1.09733 1.24052 1.21357 0.99785 0.90750 0.87446 1.23011 1.00295 0.93936 0.97632 0.87926 1.23545 1.01716 0.94556 0.97561 1.22510 0.88601 0.88227 0.99845 0.85486 1.47180 1.21570 1.17054 1.20949 1.23585 0.94307 1.04203 0.98288 1.23693 1.03394 0.93985 0.99515 1.75186 1.04717 1.24064 1.09577 1.78387 1.13598 0.95217 1.18830 1.23349 1.03634 0.93608 0.96310 1.20209 1.02951 0.93768 0.97358 0.77193 0.90400 1.18652 1.17955 0.85384 0.85061 0.84953 0.90944 0.90865 0.87403 0.87431 0.76254 0.90696 0.90573 0.86622 0.89563 0.79495 0.79194 0.89641 0.86727 0.84996 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -0.79 12.81 -35.23 -0.45 -1.25 16 2 C -0.08 -0.02 2.79 36.01 0.10 0.08 16 3 Si 0.69 -0.55 29.85 -169.99 -5.07 -5.63 16 4 C -0.04 -0.07 5.38 -104.64 -0.56 -0.63 16 5 C -0.15 -0.16 8.67 -39.56 -0.34 -0.50 16 6 C -0.07 -0.06 10.04 -39.61 -0.40 -0.45 16 7 C -0.20 -0.29 9.04 -39.43 -0.36 -0.65 16 8 C 0.13 0.31 6.69 -39.22 -0.26 0.05 16 9 O -0.32 -0.52 10.14 -19.42 -0.20 -0.72 16 10 C 0.07 -0.02 4.03 37.15 0.15 0.13 16 11 C -0.14 0.40 6.07 -27.88 -0.17 0.23 16 12 C 0.52 -0.62 7.83 -10.98 -0.09 -0.70 16 13 O -0.54 -1.64 15.98 5.56 0.09 -1.55 16 14 N -0.73 2.97 5.56 -60.29 -0.33 2.63 16 15 C 0.13 -0.52 5.51 -4.04 -0.02 -0.54 16 16 C -0.13 0.73 3.34 -89.81 -0.30 0.43 16 17 H 0.10 -0.59 6.98 -51.93 -0.36 -0.95 16 18 C -0.14 0.81 6.88 -25.92 -0.18 0.63 16 19 C 0.11 -0.40 5.11 -67.12 -0.34 -0.74 16 20 H 0.13 -0.50 8.14 -51.93 -0.42 -0.93 16 21 N -0.27 0.07 3.52 -53.97 -0.19 -0.12 16 22 C -0.05 0.09 9.68 -17.04 -0.17 -0.07 16 23 C -0.05 -0.03 12.05 -17.74 -0.21 -0.24 16 24 N -0.27 -1.22 12.41 30.24 0.38 -0.85 16 25 N -0.08 -0.31 13.16 60.35 0.79 0.48 16 26 C -0.13 0.58 7.44 -25.91 -0.19 0.39 16 27 C -0.12 -0.31 9.62 -39.44 -0.38 -0.69 16 28 H 0.38 -1.01 8.74 45.56 0.40 -0.61 16 29 H 0.08 -0.12 7.96 -51.93 -0.41 -0.53 16 30 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 31 H -0.25 -0.59 7.05 56.52 0.40 -0.19 16 32 H 0.13 -0.08 4.86 -52.49 -0.26 -0.34 16 33 H 0.13 -0.19 8.06 -52.48 -0.42 -0.62 16 34 H 0.13 0.03 6.30 -52.48 -0.33 -0.30 16 35 H 0.07 0.02 7.61 -51.93 -0.40 -0.37 16 36 H 0.07 -0.01 7.63 -51.93 -0.40 -0.40 16 37 H 0.11 -0.47 8.14 -51.93 -0.42 -0.89 16 38 H 0.11 -0.43 8.14 -51.93 -0.42 -0.86 16 39 H 0.40 -2.74 8.47 -40.82 -0.35 -3.09 16 40 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 41 H 0.08 -0.26 7.84 -51.93 -0.41 -0.67 16 42 H 0.12 -0.78 7.90 -51.93 -0.41 -1.19 16 43 H 0.09 -0.55 6.98 -51.93 -0.36 -0.91 16 44 H 0.19 -1.09 6.74 -52.49 -0.35 -1.45 16 45 H 0.19 -0.47 8.06 -52.49 -0.42 -0.89 16 46 H 0.08 -0.23 8.14 -51.93 -0.42 -0.66 16 47 H 0.11 -0.65 8.10 -51.93 -0.42 -1.07 16 48 H 0.13 0.26 8.06 -52.48 -0.42 -0.16 16 LS Contribution 398.74 15.07 6.01 6.01 Total: 0.00 -12.48 398.74 -9.34 -21.82 By element: Atomic # 1 Polarization: -10.94 SS G_CDS: -6.64 Total: -17.57 kcal Atomic # 6 Polarization: 0.45 SS G_CDS: -3.72 Total: -3.27 kcal Atomic # 7 Polarization: 1.51 SS G_CDS: 0.64 Total: 2.15 kcal Atomic # 8 Polarization: -2.95 SS G_CDS: -0.56 Total: -3.51 kcal Atomic # 14 Polarization: -0.55 SS G_CDS: -5.07 Total: -5.63 kcal Total LS contribution 6.01 Total: 6.01 kcal Total: -12.48 -9.34 -21.82 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.657 kcal (2) G-P(sol) polarization free energy of solvation -12.483 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 67.174 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.339 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.822 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.835 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.91 seconds