Wall clock time and date at job start Tue Mar 9 2021 12:52:49 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86300 * 109.47081 * 2 1 4 4 C 1.50702 * 109.46701 * 119.99835 * 2 1 3 5 5 C 1.38248 * 119.97291 * 245.02113 * 4 2 1 6 6 C 1.38283 * 120.11168 * 179.97438 * 5 4 2 7 7 C 1.38123 * 120.05639 * 359.76607 * 6 5 4 8 8 C 1.38751 * 119.94246 * 0.50856 * 7 6 5 9 9 O 1.35899 * 120.05438 * 179.74831 * 8 7 6 10 10 C 1.42904 * 117.00335 * 359.72231 * 9 8 7 11 11 C 1.52994 * 109.47298 * 180.02562 * 10 9 8 12 12 C 1.50705 * 109.46947 * 179.97438 * 11 10 9 13 13 O 1.21283 * 120.00052 * 0.02562 * 12 11 10 14 14 N 1.34777 * 120.00051 * 179.97438 * 12 11 10 15 15 C 1.46502 * 120.00161 * 180.02562 * 14 12 11 16 16 C 1.52994 * 109.47057 * 180.02562 * 15 14 12 17 17 H 1.09002 * 112.90771 * 316.25090 * 16 15 14 18 18 C 1.53779 * 113.61529 * 87.50494 * 16 15 14 19 19 C 1.53779 * 87.08402 * 139.98073 * 18 16 15 20 20 H 1.08997 * 113.61646 * 220.02209 * 19 18 16 21 21 N 1.46499 * 113.61746 * 89.11614 * 19 18 16 22 22 C 1.35312 * 125.86246 * 347.50349 * 21 19 18 23 23 C 1.35356 * 106.16904 * 179.97438 * 22 21 19 24 24 N 1.33767 * 106.49966 * 0.02562 * 23 22 21 25 25 N 1.28632 * 108.88308 * 359.73754 * 24 23 22 26 26 C 1.53784 * 113.61233 * 185.00081 * 16 15 14 27 27 C 1.38167 * 119.97609 * 65.00030 * 4 2 1 28 28 H 0.96706 * 114.00122 * 60.00248 * 1 2 3 29 29 H 1.08991 * 109.47100 * 239.99455 * 2 1 3 30 30 H 1.48500 * 109.99954 * 298.67844 * 3 2 1 31 31 H 1.48494 * 110.00166 * 60.00039 * 3 2 1 32 32 H 1.08000 * 119.94170 * 359.97438 * 5 4 2 33 33 H 1.08005 * 119.97007 * 180.02562 * 6 5 4 34 34 H 1.08003 * 120.02612 * 180.28313 * 7 6 5 35 35 H 1.09007 * 109.46845 * 60.00009 * 10 9 8 36 36 H 1.09003 * 109.47208 * 300.00679 * 10 9 8 37 37 H 1.08994 * 109.47510 * 60.00415 * 11 10 9 38 38 H 1.09001 * 109.47575 * 299.99864 * 11 10 9 39 39 H 0.97005 * 119.99592 * 0.02562 * 14 12 11 40 40 H 1.08994 * 109.46583 * 60.00367 * 15 14 12 41 41 H 1.09001 * 109.46856 * 300.00825 * 15 14 12 42 42 H 1.09006 * 113.61307 * 25.43275 * 18 16 15 43 43 H 1.09007 * 113.61642 * 254.53032 * 18 16 15 44 44 H 1.07993 * 126.91821 * 359.97438 * 22 21 19 45 45 H 1.08000 * 126.74916 * 179.97438 * 23 22 21 46 46 H 1.09004 * 113.61451 * 105.47254 * 26 16 15 47 47 H 1.08994 * 113.61477 * 334.56556 * 26 16 15 48 48 H 1.08010 * 120.02470 * 359.97438 * 27 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9312 -0.7104 1.2305 5 6 2.6382 -0.0116 2.1913 6 6 3.0999 -0.6604 3.3218 7 6 2.8515 -2.0079 3.4960 8 6 2.1471 -2.7128 2.5305 9 8 1.9058 -4.0398 2.6972 10 6 2.4119 -4.6467 3.8879 11 6 2.0454 -6.1321 3.8987 12 6 2.5796 -6.7722 5.1541 13 8 3.1928 -6.1058 5.9609 14 7 2.3752 -8.0849 5.3807 15 6 2.8941 -8.7071 6.6013 16 6 2.5276 -10.1925 6.6120 17 1 1.4986 -10.3779 6.3040 18 6 3.5551 -11.0857 5.8970 19 6 3.3427 -12.1028 7.0306 20 1 4.2618 -12.5867 7.3610 21 7 2.2593 -13.0539 6.7705 22 6 1.3338 -12.9521 5.7886 23 6 0.5328 -14.0362 5.9117 24 7 1.0008 -14.7385 6.9495 25 7 2.0272 -14.1326 7.4332 26 6 2.9213 -10.9147 7.9114 27 6 1.6844 -2.0595 1.3979 28 1 -0.3934 0.4417 -0.7651 29 1 1.7923 -0.5139 -0.8899 30 1 1.5879 2.4585 -1.2243 31 1 1.5615 2.4679 1.2084 32 1 2.8302 1.0429 2.0586 33 1 3.6517 -0.1122 4.0711 34 1 3.2084 -2.5132 4.3813 35 1 1.9750 -4.1579 4.7588 36 1 3.4963 -4.5402 3.9174 37 1 2.4825 -6.6206 3.0279 38 1 0.9610 -6.2390 3.8690 39 1 1.8845 -8.6178 4.7355 40 1 2.4571 -8.2184 7.4721 41 1 3.9784 -8.6004 6.6308 42 1 4.5594 -10.6625 5.8725 43 1 3.2209 -11.4419 4.9225 44 1 1.2509 -12.1644 5.0544 45 1 -0.3176 -14.2847 5.2941 46 1 2.0753 -11.1329 8.5632 47 1 3.7522 -10.4448 8.4376 48 1 1.1313 -2.6049 0.6473 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_4549614.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:52:49 Heat of formation + Delta-G solvation = 53.556539 kcal Electronic energy + Delta-G solvation = -29933.835090 eV Core-core repulsion = 25573.251461 eV Total energy + Delta-G solvation = -4360.583629 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 359.168 amu Computer time = 1.06 seconds Orbital eigenvalues (eV) -44.32236 -41.40250 -40.95873 -40.11238 -39.05010 -37.44897 -35.87414 -33.97016 -33.27895 -32.60747 -32.00325 -30.94413 -29.25508 -27.03856 -26.96741 -25.77072 -24.52296 -23.66695 -23.58191 -22.57057 -21.99169 -21.45197 -20.68291 -19.17528 -18.57002 -18.19162 -17.84063 -17.57995 -17.50692 -17.27536 -17.09723 -16.85878 -16.39397 -16.14699 -15.83669 -15.67324 -15.52959 -15.27368 -15.01775 -14.63192 -14.53691 -14.43066 -14.15608 -13.92373 -13.75305 -13.58571 -13.49274 -13.22507 -12.93262 -12.90039 -12.73525 -12.34835 -12.19857 -11.99206 -11.98526 -11.80463 -11.74371 -11.68362 -11.66426 -11.08447 -10.91764 -10.53724 -10.36598 -10.13717 -9.92813 -9.27466 -4.91078 0.19072 0.38898 0.62341 1.28513 1.37579 1.54476 1.59706 1.61108 1.72226 1.95600 2.48315 2.62095 3.04095 3.22734 3.38512 3.46782 3.58893 3.60746 3.69314 3.77873 3.84586 3.90921 4.01384 4.09646 4.10717 4.15651 4.22772 4.25573 4.28012 4.31177 4.36894 4.43591 4.49003 4.60489 4.63760 4.65961 4.69767 4.74288 4.78126 4.78358 4.89010 4.95107 4.97360 5.15134 5.24333 5.25496 5.37198 5.40501 5.45250 5.68876 5.71522 6.32839 6.47427 6.58430 7.17604 7.50731 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.089 4.089 3 Si 0.770 3.230 4 C -0.047 4.047 5 C -0.161 4.161 6 C -0.076 4.076 7 C -0.211 4.211 8 C 0.118 3.882 9 O -0.323 6.323 10 C 0.072 3.928 11 C -0.133 4.133 12 C 0.519 3.481 13 O -0.585 6.585 14 N -0.713 5.713 15 C 0.132 3.868 16 C -0.115 4.115 17 H 0.112 0.888 18 C -0.119 4.119 19 C 0.095 3.905 20 H 0.127 0.873 21 N -0.268 5.268 22 C -0.034 4.034 23 C -0.068 4.068 24 N -0.319 5.319 25 N -0.130 5.130 26 C -0.130 4.130 27 C -0.141 4.141 28 H 0.396 0.604 29 H 0.097 0.903 30 H -0.284 1.284 31 H -0.298 1.298 32 H 0.143 0.857 33 H 0.153 0.847 34 H 0.139 0.861 35 H 0.061 0.939 36 H 0.068 0.932 37 H 0.130 0.870 38 H 0.124 0.876 39 H 0.420 0.580 40 H 0.058 0.942 41 H 0.073 0.927 42 H 0.128 0.872 43 H 0.101 0.899 44 H 0.233 0.767 45 H 0.213 0.787 46 H 0.065 0.935 47 H 0.126 0.874 48 H 0.130 0.870 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.103 2.432 -6.005 7.183 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.369 6.369 2 C -0.197 4.197 3 Si 0.675 3.325 4 C -0.047 4.047 5 C -0.179 4.179 6 C -0.094 4.094 7 C -0.229 4.229 8 C 0.073 3.927 9 O -0.237 6.237 10 C -0.004 4.004 11 C -0.172 4.172 12 C 0.306 3.694 13 O -0.466 6.466 14 N -0.366 5.366 15 C 0.008 3.992 16 C -0.134 4.134 17 H 0.130 0.870 18 C -0.157 4.157 19 C -0.007 4.007 20 H 0.145 0.855 21 N -0.062 5.062 22 C -0.185 4.185 23 C -0.226 4.226 24 N -0.184 5.184 25 N -0.109 5.109 26 C -0.169 4.169 27 C -0.160 4.160 28 H 0.246 0.754 29 H 0.115 0.885 30 H -0.211 1.211 31 H -0.226 1.226 32 H 0.160 0.840 33 H 0.171 0.829 34 H 0.157 0.843 35 H 0.079 0.921 36 H 0.086 0.914 37 H 0.148 0.852 38 H 0.142 0.858 39 H 0.257 0.743 40 H 0.076 0.924 41 H 0.092 0.908 42 H 0.146 0.854 43 H 0.119 0.881 44 H 0.250 0.750 45 H 0.230 0.770 46 H 0.084 0.916 47 H 0.144 0.856 48 H 0.148 0.852 Dipole moment (debyes) X Y Z Total from point charges 3.790 2.331 -3.798 5.850 hybrid contribution -1.756 0.138 -1.057 2.054 sum 2.034 2.469 -4.855 5.814 Atomic orbital electron populations 1.86553 1.18445 1.80785 1.51087 1.25088 0.84159 1.12183 0.98274 0.93983 0.90354 0.71733 0.76396 1.19283 0.97040 0.92837 0.95588 1.21161 1.01460 1.00490 0.94750 1.21225 0.97325 0.93575 0.97246 1.21552 1.04330 0.96449 1.00602 1.19096 0.95711 0.83070 0.94856 1.85947 1.74711 1.20099 1.42937 1.22474 0.99321 0.93249 0.85327 1.21438 1.05343 0.93284 0.97178 1.20576 0.78864 0.82519 0.87410 1.90753 1.43088 1.63646 1.49081 1.45800 1.57609 1.08977 1.24165 1.21312 0.99521 0.91476 0.86860 1.22898 1.00952 0.92613 0.96919 0.87042 1.23545 1.02244 0.92728 0.97180 1.22852 0.87885 0.88133 1.01790 0.85533 1.47457 1.21961 1.16307 1.20448 1.24255 0.92470 1.04086 0.97704 1.24264 1.04609 0.94577 0.99163 1.75103 1.05805 1.25950 1.11534 1.78302 1.14570 0.97261 1.20739 1.23374 1.03388 0.93539 0.96593 1.20336 1.03652 0.94312 0.97680 0.75380 0.88505 1.21115 1.22607 0.83986 0.82899 0.84295 0.92055 0.91405 0.85223 0.85778 0.74265 0.92385 0.90843 0.85370 0.88058 0.75028 0.77026 0.91610 0.85603 0.85160 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -1.69 12.81 -148.98 -1.91 -3.60 16 2 C -0.09 -0.02 2.79 71.24 0.20 0.18 16 3 Si 0.77 -1.48 29.85 68.60 2.05 0.56 16 4 C -0.05 -0.18 5.38 -19.88 -0.11 -0.29 16 5 C -0.16 -0.34 8.67 22.28 0.19 -0.15 16 6 C -0.08 -0.11 10.04 22.25 0.22 0.11 16 7 C -0.21 -0.73 9.04 22.37 0.20 -0.53 16 8 C 0.12 0.65 6.69 22.50 0.15 0.80 16 9 O -0.32 -1.19 10.14 -92.41 -0.94 -2.13 16 10 C 0.07 -0.01 4.03 71.98 0.29 0.28 16 11 C -0.13 0.89 6.07 29.85 0.18 1.07 16 12 C 0.52 -1.57 7.83 87.66 0.69 -0.88 16 13 O -0.59 -3.93 15.98 -3.04 -0.05 -3.98 16 14 N -0.71 6.99 5.56 -463.06 -2.57 4.42 16 15 C 0.13 -1.19 5.51 86.38 0.48 -0.71 16 16 C -0.12 1.49 3.34 -10.27 -0.03 1.45 16 17 H 0.11 -1.59 6.98 -2.39 -0.02 -1.60 16 18 C -0.12 1.71 6.88 31.12 0.21 1.92 16 19 C 0.09 -0.74 5.11 45.52 0.23 -0.51 16 20 H 0.13 -0.99 8.14 -2.39 -0.02 -1.01 16 21 N -0.27 0.19 3.52 -324.67 -1.14 -0.96 16 22 C -0.03 0.17 9.68 83.49 0.81 0.98 16 23 C -0.07 -0.07 12.05 83.73 1.01 0.94 16 24 N -0.32 -3.38 12.41 -58.26 -0.72 -4.10 16 25 N -0.13 -1.19 13.16 37.02 0.49 -0.71 16 26 C -0.13 1.20 7.44 31.12 0.23 1.43 16 27 C -0.14 -0.80 9.62 22.36 0.22 -0.59 16 28 H 0.40 -2.15 8.74 -74.05 -0.65 -2.80 16 29 H 0.10 -0.38 7.96 -2.39 -0.02 -0.40 16 30 H -0.28 -0.50 7.11 99.48 0.71 0.21 16 31 H -0.30 -1.57 7.05 99.48 0.70 -0.87 16 32 H 0.14 -0.23 4.86 -2.91 -0.01 -0.25 16 33 H 0.15 -0.56 8.06 -2.91 -0.02 -0.58 16 34 H 0.14 0.19 6.30 -2.91 -0.02 0.17 16 35 H 0.06 0.11 7.61 -2.38 -0.02 0.09 16 36 H 0.07 0.05 7.63 -2.39 -0.02 0.03 16 37 H 0.13 -1.41 8.14 -2.39 -0.02 -1.43 16 38 H 0.12 -1.22 8.14 -2.39 -0.02 -1.23 16 39 H 0.42 -6.93 8.47 -92.70 -0.79 -7.72 16 40 H 0.06 -0.28 8.14 -2.39 -0.02 -0.30 16 41 H 0.07 -0.57 7.84 -2.39 -0.02 -0.59 16 42 H 0.13 -2.06 7.90 -2.38 -0.02 -2.08 16 43 H 0.10 -1.68 6.98 -2.38 -0.02 -1.69 16 44 H 0.23 -3.62 6.74 -2.91 -0.02 -3.64 16 45 H 0.21 -1.18 8.06 -2.91 -0.02 -1.20 16 46 H 0.07 -0.31 8.14 -2.39 -0.02 -0.32 16 47 H 0.13 -1.46 8.10 -2.39 -0.02 -1.48 16 48 H 0.13 0.64 8.06 -2.91 -0.02 0.62 16 Total: 0.00 -33.04 398.74 -0.02 -33.05 By element: Atomic # 1 Polarization: -27.70 SS G_CDS: -0.39 Total: -28.09 kcal Atomic # 6 Polarization: 0.35 SS G_CDS: 5.17 Total: 5.52 kcal Atomic # 7 Polarization: 2.61 SS G_CDS: -3.95 Total: -1.34 kcal Atomic # 8 Polarization: -6.81 SS G_CDS: -2.89 Total: -9.71 kcal Atomic # 14 Polarization: -1.48 SS G_CDS: 2.05 Total: 0.56 kcal Total: -33.04 -0.02 -33.05 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_4549614.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 86.610 kcal (2) G-P(sol) polarization free energy of solvation -33.038 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 53.572 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.015 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -33.054 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.557 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.06 seconds