Wall clock time and date at job start Tue Mar 9 2021 12:53:30 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42903 * 1 3 3 C 1.35986 * 116.99633 * 2 1 4 4 C 1.38676 * 119.99801 * 179.97438 * 3 2 1 5 5 C 1.38156 * 119.99873 * 180.02562 * 4 3 2 6 6 C 1.50699 * 119.99878 * 179.97438 * 5 4 3 7 7 O 1.42900 * 109.47266 * 105.02390 * 6 5 4 8 8 Si 1.86293 * 109.47216 * 345.01827 * 6 5 4 9 9 C 1.38676 * 120.00040 * 359.97438 * 5 4 3 10 10 O 1.35986 * 120.00100 * 180.02562 * 9 5 4 11 11 C 1.42895 * 116.99961 * 180.02562 * 10 9 5 12 12 C 1.50702 * 109.47327 * 179.97438 * 11 10 9 13 13 O 1.21282 * 119.99684 * 359.97438 * 12 11 10 14 14 N 1.34769 * 120.00461 * 179.97438 * 12 11 10 15 15 C 1.46500 * 120.00237 * 180.02562 * 14 12 11 16 16 C 1.53006 * 109.46998 * 180.02562 * 15 14 12 17 17 H 1.08995 * 112.85092 * 316.19521 * 16 15 14 18 18 C 1.53783 * 113.61172 * 87.50262 * 16 15 14 19 19 C 1.53786 * 87.07879 * 139.97819 * 18 16 15 20 20 H 1.08994 * 113.69301 * 220.00759 * 19 18 16 21 21 N 1.46504 * 113.61220 * 89.11339 * 19 18 16 22 22 C 1.35312 * 125.86861 * 347.21509 * 21 19 18 23 23 C 1.35350 * 106.17183 * 179.90527 * 22 21 19 24 24 N 1.33769 * 106.49769 * 0.35287 * 23 22 21 25 25 N 1.28623 * 108.88815 * 359.77767 * 24 23 22 26 26 C 1.53781 * 113.61256 * 185.00048 * 16 15 14 27 27 C 1.38716 * 119.99891 * 0.27357 * 9 5 4 28 28 C 1.38115 * 120.00051 * 359.45327 * 27 9 5 29 29 H 1.09001 * 109.46807 * 179.97438 * 1 2 3 30 30 H 1.08993 * 109.47336 * 299.99979 * 1 2 3 31 31 H 1.08997 * 109.47052 * 60.00400 * 1 2 3 32 32 H 1.07993 * 120.00089 * 359.97438 * 4 3 2 33 33 H 1.09005 * 109.46865 * 225.01776 * 6 5 4 34 34 H 0.96697 * 114.00044 * 59.99414 * 7 6 5 35 35 H 1.48502 * 109.99970 * 299.99898 * 8 6 5 36 36 H 1.48500 * 110.00031 * 61.32008 * 8 6 5 37 37 H 1.08996 * 109.47554 * 59.99222 * 11 10 9 38 38 H 1.09004 * 109.47340 * 299.99444 * 11 10 9 39 39 H 0.97010 * 119.99854 * 0.02562 * 14 12 11 40 40 H 1.08993 * 109.47452 * 60.00368 * 15 14 12 41 41 H 1.09000 * 109.47175 * 300.00158 * 15 14 12 42 42 H 1.08996 * 113.61199 * 254.52053 * 18 16 15 43 43 H 1.08996 * 113.61879 * 25.43558 * 18 16 15 44 44 H 1.08002 * 126.91321 * 0.02562 * 22 21 19 45 45 H 1.08008 * 126.75129 * 180.13238 * 23 22 21 46 46 H 1.09007 * 113.61545 * 334.56848 * 26 16 15 47 47 H 1.08996 * 113.61597 * 105.38544 * 26 16 15 48 48 H 1.08001 * 120.00257 * 179.70141 * 27 9 5 49 49 H 1.08004 * 119.99759 * 180.30040 * 28 27 9 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0463 1.2117 0.0000 4 6 3.4312 1.2843 0.0005 5 6 4.0583 2.5153 0.0011 6 6 5.5632 2.5942 0.0022 7 8 6.0217 2.9680 -1.2986 8 14 6.2719 0.9324 0.4568 9 6 3.3030 3.6783 0.0005 10 8 3.9203 4.8900 0.0005 11 6 3.0803 6.0460 0.0005 12 6 3.9344 7.2876 0.0012 13 8 5.1434 7.1919 0.0021 14 7 3.3548 8.5043 0.0008 15 6 4.1851 9.7113 0.0008 16 6 3.2856 10.9490 0.0009 17 1 2.4504 10.8654 -0.6943 18 6 2.8739 11.4111 1.4087 19 6 3.0762 12.8516 0.9095 20 1 3.5476 13.5068 1.6419 21 7 1.8753 13.4390 0.3101 22 6 0.7558 12.7665 -0.0438 23 6 -0.0942 13.6898 -0.5508 24 7 0.5416 14.8652 -0.4903 25 7 1.7061 14.6826 0.0246 26 6 4.0590 12.2725 -0.1218 27 6 1.9177 3.6056 0.0052 28 6 1.2908 2.3750 -0.0010 29 1 -0.3633 -1.0277 -0.0005 30 1 -0.3633 0.5138 0.8899 31 1 -0.3633 0.5138 -0.8900 32 1 4.0194 0.3786 0.0014 33 1 5.8874 3.3387 0.7295 34 1 5.6912 3.8250 -1.6009 35 1 5.8027 0.5324 1.8077 36 1 5.8633 -0.0851 -0.5447 37 1 2.4509 6.0379 0.8904 38 1 2.4511 6.0379 -0.8895 39 1 2.3877 8.5808 0.0004 40 1 4.8146 9.7193 -0.8889 41 1 4.8141 9.7196 0.8910 42 1 1.8393 11.1774 1.6598 43 1 3.5767 11.1165 2.1880 44 1 0.5758 11.7066 0.0594 45 1 -1.0887 13.5119 -0.9328 46 1 5.0859 12.2133 0.2390 47 1 3.9825 12.7333 -1.1066 48 1 1.3295 4.5113 0.0097 49 1 0.2122 2.3185 -0.0023 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_4974302.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:30 Heat of formation + Delta-G solvation = 25.394047 kcal Electronic energy + Delta-G solvation = -33237.559504 eV Core-core repulsion = 28557.072466 eV Total energy + Delta-G solvation = -4680.487039 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 375.167 amu Computer time = 1.09 seconds Orbital eigenvalues (eV) -44.31576 -41.90441 -41.05641 -40.33252 -39.73133 -38.15553 -37.00045 -35.87815 -33.93304 -32.91974 -32.00053 -31.34565 -30.26002 -28.45901 -27.94710 -26.97104 -26.63527 -25.19709 -23.77803 -23.57649 -22.56511 -22.49144 -21.74536 -20.72897 -19.61476 -18.88877 -18.68556 -18.15834 -17.99174 -17.56341 -17.48318 -17.36062 -16.96115 -16.75877 -16.30606 -16.16970 -15.97854 -15.69711 -15.61785 -15.48386 -15.37302 -15.03875 -14.86146 -14.57351 -14.16126 -13.98212 -13.85868 -13.62768 -13.57732 -13.48190 -13.22036 -13.09854 -12.72870 -12.56437 -12.36382 -12.22829 -12.19960 -11.98402 -11.74332 -11.67426 -11.53200 -11.28708 -11.12215 -11.03548 -10.89435 -10.35903 -10.23713 -10.17689 -8.93145 -4.86975 -0.06698 0.21766 0.63293 1.31921 1.38268 1.44125 1.47699 1.58921 1.60578 1.89887 2.22894 2.42872 2.54557 3.03969 3.22415 3.41481 3.45819 3.53152 3.60697 3.67650 3.70869 3.83731 3.94829 3.99325 4.04486 4.08903 4.10000 4.13521 4.15606 4.27293 4.28520 4.31747 4.33401 4.34103 4.43645 4.57253 4.61024 4.66815 4.67870 4.74303 4.78691 4.87360 4.89002 4.95613 5.00938 5.08058 5.14501 5.26155 5.29622 5.35984 5.72235 6.07098 6.31035 6.46648 6.54962 7.15004 7.51673 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.017 3.983 2 O -0.343 6.343 3 C 0.087 3.913 4 C -0.143 4.143 5 C -0.119 4.119 6 C -0.083 4.083 7 O -0.545 6.545 8 Si 0.809 3.191 9 C 0.099 3.901 10 O -0.310 6.310 11 C 0.034 3.966 12 C 0.513 3.487 13 O -0.569 6.569 14 N -0.707 5.707 15 C 0.134 3.866 16 C -0.113 4.113 17 H 0.115 0.885 18 C -0.119 4.119 19 C 0.095 3.905 20 H 0.125 0.875 21 N -0.268 5.268 22 C -0.033 4.033 23 C -0.069 4.069 24 N -0.320 5.320 25 N -0.131 5.131 26 C -0.131 4.131 27 C -0.153 4.153 28 C -0.159 4.159 29 H 0.113 0.887 30 H 0.071 0.929 31 H 0.069 0.931 32 H 0.122 0.878 33 H 0.080 0.920 34 H 0.372 0.628 35 H -0.267 1.267 36 H -0.288 1.288 37 H 0.126 0.874 38 H 0.125 0.875 39 H 0.422 0.578 40 H 0.059 0.941 41 H 0.072 0.928 42 H 0.103 0.897 43 H 0.127 0.873 44 H 0.235 0.765 45 H 0.213 0.787 46 H 0.124 0.876 47 H 0.066 0.934 48 H 0.177 0.823 49 H 0.166 0.834 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -6.681 -1.795 2.979 7.532 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.257 6.257 3 C 0.042 3.958 4 C -0.162 4.162 5 C -0.120 4.120 6 C -0.191 4.191 7 O -0.351 6.351 8 Si 0.711 3.289 9 C 0.054 3.946 10 O -0.224 6.224 11 C -0.044 4.044 12 C 0.299 3.701 13 O -0.448 6.448 14 N -0.362 5.362 15 C 0.010 3.990 16 C -0.132 4.132 17 H 0.133 0.867 18 C -0.157 4.157 19 C -0.007 4.007 20 H 0.143 0.857 21 N -0.062 5.062 22 C -0.184 4.184 23 C -0.227 4.227 24 N -0.185 5.185 25 N -0.110 5.110 26 C -0.170 4.170 27 C -0.172 4.172 28 C -0.177 4.177 29 H 0.132 0.868 30 H 0.089 0.911 31 H 0.088 0.912 32 H 0.140 0.860 33 H 0.098 0.902 34 H 0.221 0.779 35 H -0.193 1.193 36 H -0.216 1.216 37 H 0.144 0.856 38 H 0.143 0.857 39 H 0.260 0.740 40 H 0.077 0.923 41 H 0.091 0.909 42 H 0.121 0.879 43 H 0.145 0.855 44 H 0.252 0.748 45 H 0.230 0.770 46 H 0.143 0.857 47 H 0.084 0.916 48 H 0.194 0.806 49 H 0.183 0.817 Dipole moment (debyes) X Y Z Total from point charges -4.752 -1.922 3.268 6.079 hybrid contribution -2.413 0.290 -0.414 2.466 sum -7.165 -1.632 2.854 7.883 Atomic orbital electron populations 1.23384 0.75975 1.05690 1.02648 1.86082 1.23868 1.26751 1.89030 1.19003 0.91710 0.85661 0.99433 1.20156 0.92885 0.96908 1.06211 1.19550 0.96812 0.90626 1.05038 1.25336 0.91136 1.14030 0.88601 1.86658 1.73877 1.42293 1.32265 0.92514 0.90041 0.69984 0.76353 1.18666 0.91528 0.84294 1.00145 1.86093 1.35401 1.11656 1.89223 1.22788 0.92794 0.81871 1.06939 1.20426 0.88246 0.85446 0.76013 1.90792 1.16667 1.87378 1.49916 1.45610 1.11600 1.04079 1.74897 1.21318 0.93141 0.82050 1.02446 1.22900 0.99251 0.92545 0.98505 0.86703 1.23545 1.05671 0.88973 0.97476 1.22851 0.82873 0.97388 0.97555 0.85679 1.47469 1.13980 1.05753 1.38998 1.24267 0.86782 1.02933 1.04409 1.24273 1.03765 0.88443 1.06219 1.75102 1.00536 1.26458 1.16360 1.78312 1.14582 1.00063 1.18023 1.23375 0.99834 0.94771 0.99029 1.21476 0.92120 1.00007 1.03551 1.21443 1.01679 0.90719 1.03903 0.86845 0.91080 0.91199 0.86034 0.90197 0.77934 1.19277 1.21593 0.85635 0.85724 0.74039 0.92284 0.90946 0.87851 0.85477 0.74832 0.77024 0.85736 0.91556 0.80569 0.81689 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.08 9.81 113.37 1.11 1.04 16 2 O -0.34 -1.84 10.50 -93.39 -0.98 -2.82 16 3 C 0.09 0.46 6.69 22.49 0.15 0.61 16 4 C -0.14 -1.24 8.59 22.35 0.19 -1.05 16 5 C -0.12 -0.83 5.28 -19.78 -0.10 -0.93 16 6 C -0.08 -0.56 2.33 71.24 0.17 -0.39 16 7 O -0.54 -4.62 12.65 -148.98 -1.89 -6.51 16 8 Si 0.81 3.86 30.40 68.60 2.09 5.94 16 9 C 0.10 0.21 6.62 22.49 0.15 0.36 16 10 O -0.31 -0.41 8.56 -74.35 -0.64 -1.04 16 11 C 0.03 -0.29 5.22 71.24 0.37 0.08 16 12 C 0.51 -1.86 7.91 87.66 0.69 -1.16 16 13 O -0.57 -4.76 16.50 16.00 0.26 -4.49 16 14 N -0.71 8.37 5.56 -463.06 -2.57 5.80 16 15 C 0.13 -1.37 5.51 86.38 0.48 -0.89 16 16 C -0.11 1.64 3.33 -10.26 -0.03 1.61 16 17 H 0.11 -1.89 6.96 -2.39 -0.02 -1.90 16 18 C -0.12 1.86 6.88 31.12 0.21 2.08 16 19 C 0.09 -0.83 5.11 45.52 0.23 -0.60 16 20 H 0.13 -1.05 8.14 -2.39 -0.02 -1.07 16 21 N -0.27 0.49 3.52 -324.66 -1.14 -0.66 16 22 C -0.03 0.21 9.68 83.49 0.81 1.02 16 23 C -0.07 0.02 12.05 83.73 1.01 1.03 16 24 N -0.32 -3.10 12.41 -58.25 -0.72 -3.82 16 25 N -0.13 -1.09 13.16 37.02 0.49 -0.61 16 26 C -0.13 1.33 7.44 31.12 0.23 1.56 16 27 C -0.15 0.58 9.03 22.35 0.20 0.78 16 28 C -0.16 0.26 9.03 22.35 0.20 0.47 16 29 H 0.11 -0.78 8.14 -2.39 -0.02 -0.80 16 30 H 0.07 -0.53 7.66 -2.39 -0.02 -0.55 16 31 H 0.07 -0.50 7.66 -2.39 -0.02 -0.52 16 32 H 0.12 1.28 4.93 -2.91 -0.01 1.26 16 33 H 0.08 0.48 7.82 -2.38 -0.02 0.46 16 34 H 0.37 2.06 8.59 -74.06 -0.64 1.43 16 35 H -0.27 -1.94 7.11 99.48 0.71 -1.24 16 36 H -0.29 -3.06 6.81 99.48 0.68 -2.39 16 37 H 0.13 -1.88 7.65 -2.39 -0.02 -1.89 16 38 H 0.13 -1.83 7.67 -2.39 -0.02 -1.85 16 39 H 0.42 -8.36 8.47 -92.70 -0.79 -9.15 16 40 H 0.06 -0.34 8.14 -2.39 -0.02 -0.36 16 41 H 0.07 -0.61 7.84 -2.39 -0.02 -0.63 16 42 H 0.10 -1.90 6.99 -2.39 -0.02 -1.92 16 43 H 0.13 -2.17 7.89 -2.39 -0.02 -2.19 16 44 H 0.24 -4.13 6.73 -2.91 -0.02 -4.15 16 45 H 0.21 -1.45 8.06 -2.91 -0.02 -1.47 16 46 H 0.12 -1.52 8.10 -2.38 -0.02 -1.53 16 47 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 48 H 0.18 -2.28 6.29 -2.91 -0.02 -2.30 16 49 H 0.17 -1.34 6.29 -2.91 -0.02 -1.35 16 Total: 0.00 -37.69 405.89 0.58 -37.11 By element: Atomic # 1 Polarization: -34.12 SS G_CDS: -0.39 Total: -34.51 kcal Atomic # 6 Polarization: -0.46 SS G_CDS: 6.07 Total: 5.61 kcal Atomic # 7 Polarization: 4.67 SS G_CDS: -3.95 Total: 0.72 kcal Atomic # 8 Polarization: -11.63 SS G_CDS: -3.24 Total: -14.87 kcal Atomic # 14 Polarization: 3.86 SS G_CDS: 2.09 Total: 5.94 kcal Total: -37.69 0.58 -37.11 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_4974302.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 62.503 kcal (2) G-P(sol) polarization free energy of solvation -37.686 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.817 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.577 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -37.109 kcal (6) G-S(sol) free energy of system = (1) + (5) 25.394 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.09 seconds