Wall clock time and date at job start Tue Mar 9 2021 12:53:44 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42906 * 1 3 3 Si 1.86303 * 109.46990 * 2 1 4 4 C 1.50697 * 109.47295 * 119.99787 * 2 1 3 5 5 C 1.38238 * 119.94567 * 245.02279 * 4 2 1 6 6 C 1.38188 * 120.07481 * 179.74801 * 5 4 2 7 7 C 1.38683 * 119.95055 * 0.48448 * 6 5 4 8 8 O 1.35912 * 120.05682 * 179.76701 * 7 6 5 9 9 C 1.42901 * 117.00163 * 359.72757 * 8 7 6 10 10 C 1.50697 * 109.47119 * 180.02562 * 9 8 7 11 11 O 1.21281 * 120.00364 * 359.97438 * 10 9 8 12 12 N 1.34783 * 120.00012 * 180.02562 * 10 9 8 13 13 C 1.46500 * 120.00119 * 179.97438 * 12 10 9 14 14 C 1.52995 * 109.47108 * 179.97438 * 13 12 10 15 15 H 1.09002 * 112.85043 * 314.66487 * 14 13 12 16 16 C 1.53785 * 113.69093 * 85.93603 * 14 13 12 17 17 C 1.53779 * 87.08093 * 139.99088 * 16 14 13 18 18 H 1.08999 * 113.68761 * 220.00455 * 17 16 14 19 19 N 1.46504 * 113.61484 * 89.11287 * 17 16 14 20 20 C 1.35313 * 125.86818 * 347.50675 * 19 17 16 21 21 C 1.35350 * 106.17696 * 179.97438 * 20 19 17 22 22 N 1.33770 * 106.49471 * 359.97438 * 21 20 19 23 23 N 1.28635 * 108.88825 * 359.73613 * 22 21 20 24 24 C 1.53781 * 113.61293 * 183.47228 * 14 13 12 25 25 C 1.38835 * 119.88216 * 359.49149 * 7 6 5 26 26 Br 1.89099 * 120.03467 * 180.29481 * 25 7 6 27 27 C 1.38198 * 119.92995 * 0.27925 * 25 7 6 28 28 H 0.96703 * 113.99553 * 299.99583 * 1 2 3 29 29 H 1.08996 * 109.47154 * 240.00597 * 2 1 3 30 30 H 1.48497 * 110.00065 * 178.68308 * 3 2 1 31 31 H 1.48497 * 110.00202 * 300.00429 * 3 2 1 32 32 H 1.07998 * 119.95748 * 359.97438 * 5 4 2 33 33 H 1.07992 * 120.02608 * 180.25380 * 6 5 4 34 34 H 1.09000 * 109.46782 * 59.99782 * 9 8 7 35 35 H 1.08996 * 109.46997 * 299.99698 * 9 8 7 36 36 H 0.96997 * 119.99419 * 359.97438 * 12 10 9 37 37 H 1.09005 * 109.46936 * 59.99437 * 13 12 10 38 38 H 1.09004 * 109.46937 * 300.00111 * 13 12 10 39 39 H 1.09003 * 113.60734 * 254.54208 * 16 14 13 40 40 H 1.08996 * 113.61146 * 25.43706 * 16 14 13 41 41 H 1.08004 * 126.91251 * 359.97438 * 20 19 17 42 42 H 1.07999 * 126.75152 * 180.02562 * 21 20 19 43 43 H 1.09005 * 113.61302 * 334.47929 * 24 14 13 44 44 H 1.08996 * 113.61527 * 105.30092 * 24 14 13 45 45 H 1.07993 * 119.97482 * 179.97438 * 27 25 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4291 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 1.2305 5 6 2.6383 -0.0110 2.1907 6 6 3.0957 -0.6585 3.3225 7 6 2.8539 -2.0138 3.4902 8 8 3.3069 -2.6539 4.6003 9 6 4.0304 -1.8701 5.5513 10 6 4.4502 -2.7428 6.7059 11 8 4.1581 -3.9199 6.7140 12 7 5.1494 -2.2150 7.7302 13 6 5.5570 -3.0632 8.8530 14 6 6.3317 -2.2241 9.8711 15 1 7.0745 -1.5752 9.4071 16 6 5.4328 -1.5023 10.8888 17 6 6.4853 -1.8575 11.9522 18 1 6.0574 -2.1591 12.9082 19 7 7.5401 -0.8507 12.0932 20 6 7.7770 0.1740 11.2418 21 6 8.8331 0.8506 11.7507 22 7 9.1856 0.2155 12.8739 23 7 8.3964 -0.7846 13.0520 24 6 6.8798 -3.0411 11.0530 25 6 2.1433 -2.7142 2.5249 26 35 1.8039 -4.5604 2.7531 27 6 1.6840 -2.0607 1.3971 28 1 -0.3933 0.4417 0.7651 29 1 1.7924 -0.5137 -0.8900 30 1 3.5346 1.7704 0.0321 31 1 1.5614 2.4680 -1.2084 32 1 2.8301 1.0435 2.0579 33 1 3.6443 -0.1105 4.0742 34 1 3.3942 -1.0642 5.9170 35 1 4.9152 -1.4473 5.0756 36 1 5.3826 -1.2735 7.7239 37 1 6.1934 -3.8690 8.4872 38 1 4.6722 -3.4865 9.3285 39 1 5.3399 -0.4315 10.7069 40 1 4.4712 -1.9909 11.0457 41 1 7.2329 0.4054 10.3380 42 1 9.2989 1.7307 11.3325 43 1 6.3138 -3.9505 11.2550 44 1 7.9548 -3.2140 11.0031 45 1 1.1316 -2.6049 0.6455 There are 66 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 66 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). Br: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_6201210.mol2 45 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:53:44 Heat of formation + Delta-G solvation = 66.521337 kcal Electronic energy + Delta-G solvation = -30557.495866 eV Core-core repulsion = 26013.194048 eV Total energy + Delta-G solvation = -4544.301817 eV No. of doubly occupied orbitals = 66 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 423.063 amu Computer time = 1.00 seconds Orbital eigenvalues (eV) -44.29548 -41.65936 -40.87853 -40.08296 -39.03289 -37.20319 -35.86472 -33.92293 -33.58437 -31.98606 -31.93449 -30.82631 -30.19613 -28.40303 -26.95948 -26.32389 -25.13811 -23.88982 -23.55713 -22.58219 -22.36798 -21.71072 -20.71475 -19.55171 -18.65669 -18.18437 -17.95742 -17.52048 -17.37144 -17.13973 -16.93192 -16.38652 -16.32163 -16.05852 -15.84390 -15.65497 -15.47331 -15.32714 -14.90509 -14.80002 -14.66059 -14.41827 -14.00227 -13.80226 -13.69982 -13.64604 -13.56201 -13.21221 -12.70978 -12.34618 -12.18864 -12.15762 -12.11633 -11.96608 -11.89754 -11.83240 -11.72505 -11.64621 -11.22481 -11.02940 -10.88315 -10.41356 -10.33823 -10.16293 -9.96016 -9.30521 -4.97234 -0.03808 0.13461 0.65287 0.65500 1.34920 1.39911 1.45261 1.50623 1.62659 1.68058 2.03777 2.41360 2.52874 3.05581 3.23848 3.44959 3.50393 3.57072 3.63334 3.69072 3.72374 3.78524 3.87839 4.07072 4.11946 4.12307 4.14114 4.17200 4.30233 4.33517 4.34759 4.44638 4.51894 4.62199 4.65814 4.68347 4.75489 4.79871 4.86394 4.90310 4.97115 5.01748 5.16395 5.25434 5.28282 5.37118 5.50287 5.74115 6.09348 6.49571 6.80708 7.18878 7.53596 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.559 6.559 2 C -0.077 4.077 3 Si 0.790 3.210 4 C -0.154 4.154 5 C -0.053 4.053 6 C -0.187 4.187 7 C 0.150 3.850 8 O -0.307 6.307 9 C 0.030 3.970 10 C 0.510 3.490 11 O -0.572 6.572 12 N -0.706 5.706 13 C 0.134 3.866 14 C -0.113 4.113 15 H 0.116 0.884 16 C -0.118 4.118 17 C 0.095 3.905 18 H 0.125 0.875 19 N -0.268 5.268 20 C -0.032 4.032 21 C -0.069 4.069 22 N -0.320 5.320 23 N -0.132 5.132 24 C -0.132 4.132 25 C -0.146 4.146 26 Br -0.057 7.057 27 C -0.037 4.037 28 H 0.396 0.604 29 H 0.102 0.898 30 H -0.276 1.276 31 H -0.306 1.306 32 H 0.168 0.832 33 H 0.184 0.816 34 H 0.137 0.863 35 H 0.130 0.870 36 H 0.423 0.577 37 H 0.056 0.944 38 H 0.071 0.929 39 H 0.106 0.894 40 H 0.127 0.873 41 H 0.237 0.763 42 H 0.213 0.787 43 H 0.123 0.877 44 H 0.065 0.935 45 H 0.133 0.867 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.927 9.745 -0.358 9.940 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.367 6.367 2 C -0.186 4.186 3 Si 0.695 3.305 4 C -0.155 4.155 5 C -0.070 4.070 6 C -0.206 4.206 7 C 0.102 3.898 8 O -0.219 6.219 9 C -0.047 4.047 10 C 0.296 3.704 11 O -0.450 6.450 12 N -0.361 5.361 13 C 0.010 3.990 14 C -0.131 4.131 15 H 0.134 0.866 16 C -0.156 4.156 17 C -0.006 4.006 18 H 0.143 0.857 19 N -0.062 5.062 20 C -0.183 4.183 21 C -0.227 4.227 22 N -0.185 5.185 23 N -0.111 5.111 24 C -0.171 4.171 25 C -0.226 4.226 26 Br 0.029 6.971 27 C -0.057 4.057 28 H 0.246 0.754 29 H 0.120 0.880 30 H -0.202 1.202 31 H -0.235 1.235 32 H 0.185 0.815 33 H 0.201 0.799 34 H 0.154 0.846 35 H 0.148 0.852 36 H 0.261 0.739 37 H 0.074 0.926 38 H 0.089 0.911 39 H 0.124 0.876 40 H 0.145 0.855 41 H 0.253 0.747 42 H 0.230 0.770 43 H 0.141 0.859 44 H 0.084 0.916 45 H 0.151 0.849 Dipole moment (debyes) X Y Z Total from point charges -1.214 7.587 0.205 7.686 hybrid contribution 0.029 0.012 -1.216 1.217 sum -1.185 7.599 -1.011 7.757 Atomic orbital electron populations 1.86495 1.17410 1.82249 1.50518 1.25291 0.85263 1.11437 0.96609 0.93819 0.77773 0.73880 0.84992 1.20367 1.02710 0.93682 0.98765 1.21264 0.93506 1.00665 0.91590 1.21594 1.05898 0.91433 1.01697 1.18797 0.93194 0.91779 0.86079 1.86250 1.68674 1.38048 1.28943 1.22904 0.99696 0.93820 0.88268 1.20516 0.78028 0.87913 0.83940 1.90808 1.55819 1.18941 1.79476 1.45581 1.55938 1.14579 1.19986 1.21295 0.98709 0.93054 0.85916 1.22893 0.98363 0.98034 0.93837 0.86610 1.23537 0.97215 1.03896 0.90915 1.22841 0.86725 0.88187 1.02875 0.85738 1.47462 1.22581 1.20712 1.15450 1.24287 1.01901 0.91027 1.01104 1.24279 0.99275 1.04453 0.94698 1.75105 1.20807 1.03919 1.18672 1.78318 1.01480 1.18013 1.13282 1.23374 1.02494 0.97467 0.93791 1.21281 1.09885 0.91837 0.99553 1.96762 1.94953 1.07735 1.97698 1.20872 0.95884 0.94547 0.94434 0.75398 0.88014 1.20237 1.23501 0.81489 0.79881 0.84574 0.85211 0.73869 0.92578 0.91083 0.87600 0.85527 0.74695 0.76993 0.85885 0.91612 0.84934 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 0.97 12.83 -148.98 -1.91 -0.94 16 2 C -0.08 0.26 2.80 71.24 0.20 0.46 16 3 Si 0.79 -5.40 29.80 68.60 2.04 -3.36 16 4 C -0.15 0.49 5.35 -19.85 -0.11 0.38 16 5 C -0.05 0.44 8.66 22.26 0.19 0.63 16 6 C -0.19 1.57 9.04 22.36 0.20 1.77 16 7 C 0.15 -0.03 6.68 22.52 0.15 0.13 16 8 O -0.31 -0.54 9.01 -73.53 -0.66 -1.20 16 9 C 0.03 -0.28 5.22 71.23 0.37 0.09 16 10 C 0.51 -1.59 7.91 87.65 0.69 -0.90 16 11 O -0.57 -5.79 16.50 16.00 0.26 -5.52 16 12 N -0.71 8.37 5.56 -463.05 -2.57 5.79 16 13 C 0.13 -1.31 5.50 86.38 0.48 -0.84 16 14 C -0.11 1.63 3.33 -10.27 -0.03 1.59 16 15 H 0.12 -1.92 6.97 -2.39 -0.02 -1.94 16 16 C -0.12 1.88 6.88 31.12 0.21 2.09 16 17 C 0.10 -0.84 5.11 45.52 0.23 -0.61 16 18 H 0.12 -1.05 8.14 -2.39 -0.02 -1.07 16 19 N -0.27 0.54 3.52 -324.65 -1.14 -0.60 16 20 C -0.03 0.22 9.68 83.49 0.81 1.03 16 21 C -0.07 0.04 12.05 83.73 1.01 1.05 16 22 N -0.32 -3.05 12.41 -58.26 -0.72 -3.77 16 23 N -0.13 -1.09 13.17 37.02 0.49 -0.60 16 24 C -0.13 1.31 7.44 31.12 0.23 1.55 16 25 C -0.15 -0.60 6.24 22.40 0.14 -0.46 16 26 Br -0.06 -0.48 33.16 -20.37 -0.68 -1.16 16 27 C -0.04 -0.07 9.42 22.27 0.21 0.14 16 28 H 0.40 -4.08 8.70 -74.06 -0.64 -4.73 16 29 H 0.10 -0.13 7.96 -2.39 -0.02 -0.15 16 30 H -0.28 0.95 7.11 99.48 0.71 1.65 16 31 H -0.31 -0.68 7.11 99.48 0.71 0.02 16 32 H 0.17 -2.47 4.90 -2.91 -0.01 -2.48 16 33 H 0.18 -3.21 6.30 -2.91 -0.02 -3.23 16 34 H 0.14 -2.34 7.65 -2.39 -0.02 -2.35 16 35 H 0.13 -2.08 7.67 -2.39 -0.02 -2.10 16 36 H 0.42 -8.67 8.47 -92.71 -0.79 -9.46 16 37 H 0.06 -0.28 8.14 -2.38 -0.02 -0.30 16 38 H 0.07 -0.56 7.88 -2.39 -0.02 -0.57 16 39 H 0.11 -2.02 6.98 -2.39 -0.02 -2.03 16 40 H 0.13 -2.18 7.92 -2.39 -0.02 -2.20 16 41 H 0.24 -4.30 6.74 -2.91 -0.02 -4.32 16 42 H 0.21 -1.53 8.06 -2.91 -0.02 -1.55 16 43 H 0.12 -1.44 8.10 -2.38 -0.02 -1.46 16 44 H 0.07 -0.35 8.14 -2.39 -0.02 -0.37 16 45 H 0.13 0.36 8.06 -2.91 -0.02 0.34 16 Total: 0.00 -41.33 398.27 -0.22 -41.55 By element: Atomic # 1 Polarization: -37.99 SS G_CDS: -0.32 Total: -38.30 kcal Atomic # 6 Polarization: 3.13 SS G_CDS: 4.99 Total: 8.12 kcal Atomic # 7 Polarization: 4.77 SS G_CDS: -3.95 Total: 0.82 kcal Atomic # 8 Polarization: -5.36 SS G_CDS: -2.31 Total: -7.67 kcal Atomic # 14 Polarization: -5.40 SS G_CDS: 2.04 Total: -3.36 kcal Atomic # 35 Polarization: -0.48 SS G_CDS: -0.68 Total: -1.16 kcal Total: -41.33 -0.22 -41.55 kcal The number of atoms in the molecule is 45 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_6201210.mol2 45 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 108.072 kcal (2) G-P(sol) polarization free energy of solvation -41.329 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 66.743 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -0.222 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -41.550 kcal (6) G-S(sol) free energy of system = (1) + (5) 66.521 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.00 seconds