Wall clock time and date at job start Tue Mar 9 2021 12:54:12 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42892 * 1 3 3 Si 1.86296 * 109.47674 * 2 1 4 4 C 1.50705 * 109.47218 * 120.00084 * 2 1 3 5 5 C 1.34236 * 126.50150 * 254.97517 * 4 2 1 6 6 N 1.36837 * 109.93711 * 180.29861 * 5 4 2 7 7 C 1.46495 * 125.05897 * 179.72930 * 6 5 4 8 8 C 1.50702 * 109.47463 * 265.02477 * 7 6 5 9 9 O 1.21281 * 119.99863 * 0.02562 * 8 7 6 10 10 N 1.34775 * 119.99997 * 179.97438 * 8 7 6 11 11 C 1.46501 * 119.99950 * 180.02562 * 10 8 7 12 12 C 1.53002 * 109.46810 * 180.02562 * 11 10 8 13 13 H 1.08997 * 112.84817 * 314.66263 * 12 11 10 14 14 C 1.53773 * 113.61620 * 85.86731 * 12 11 10 15 15 C 1.53956 * 87.02510 * 139.94788 * 14 12 11 16 16 H 1.08997 * 113.66715 * 220.06618 * 15 14 12 17 17 N 1.46499 * 113.61152 * 89.19490 * 15 14 12 18 18 C 1.35311 * 125.87022 * 347.46858 * 17 15 14 19 19 C 1.35355 * 106.17405 * 180.02562 * 18 17 15 20 20 N 1.33769 * 106.49652 * 0.02562 * 19 18 17 21 21 N 1.28631 * 108.88587 * 359.73520 * 20 19 18 22 22 C 1.53787 * 113.60889 * 183.47249 * 12 11 10 23 23 C 1.37689 * 109.87393 * 359.55777 * 6 5 4 24 24 C 1.39087 * 133.51282 * 180.09798 * 23 6 5 25 25 C 1.37788 * 119.77795 * 180.36513 * 24 23 6 26 26 C 1.38784 * 120.66934 * 359.97438 * 25 24 23 27 27 C 1.36667 * 120.52601 * 0.02562 * 26 25 24 28 28 C 1.39587 * 119.76286 * 359.97438 * 27 26 25 29 29 H 0.96702 * 114.00163 * 59.99710 * 1 2 3 30 30 H 1.09003 * 109.47344 * 239.99746 * 2 1 3 31 31 H 1.48508 * 109.99730 * 298.68251 * 3 2 1 32 32 H 1.48503 * 109.99664 * 59.99898 * 3 2 1 33 33 H 1.08002 * 125.02686 * 0.02929 * 5 4 2 34 34 H 1.09004 * 109.47318 * 25.02832 * 7 6 5 35 35 H 1.09004 * 109.47068 * 145.02521 * 7 6 5 36 36 H 0.97005 * 119.99829 * 0.02562 * 10 8 7 37 37 H 1.09000 * 109.46835 * 299.99883 * 11 10 8 38 38 H 1.08993 * 109.46921 * 60.00580 * 11 10 8 39 39 H 1.09004 * 113.61262 * 254.52191 * 14 12 11 40 40 H 1.08998 * 113.61625 * 25.42661 * 14 12 11 41 41 H 1.07995 * 126.91654 * 0.02562 * 18 17 15 42 42 H 1.08005 * 126.75051 * 179.97438 * 19 18 17 43 43 H 1.08991 * 113.61462 * 334.56335 * 22 12 11 44 44 H 1.08996 * 113.61185 * 105.47067 * 22 12 11 45 45 H 1.08001 * 120.10869 * 0.38115 * 24 23 6 46 46 H 1.08004 * 119.66581 * 179.97438 * 25 24 23 47 47 H 1.08000 * 119.73904 * 180.02562 * 26 25 24 48 48 H 1.08000 * 120.11550 * 179.97438 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 2.4612 -0.1377 2.3228 6 7 2.8092 -1.0996 3.2317 7 6 3.4213 -0.8414 4.5374 8 6 4.9191 -0.9619 4.4228 9 8 5.4254 -1.2360 3.3554 10 7 5.6959 -0.7642 5.5062 11 6 7.1520 -0.8808 5.3947 12 6 7.7911 -0.6113 6.7584 13 1 7.3714 0.2623 7.2573 14 6 7.8706 -1.8557 7.6582 15 6 9.2666 -1.3625 8.0804 16 1 10.0023 -2.1610 8.1761 17 7 9.2466 -0.4655 9.2385 18 6 8.1480 0.1193 9.7695 19 6 8.5832 0.8587 10.8164 20 7 9.9093 0.6926 10.8735 21 7 10.2706 -0.1016 9.9283 22 6 9.3287 -0.6260 6.7318 23 6 2.4948 -2.3458 2.7379 24 6 2.6306 -3.6364 3.2384 25 6 2.2170 -4.7109 2.4816 26 6 1.6647 -4.5195 1.2228 27 6 1.5219 -3.2601 0.7116 28 6 1.9343 -2.1571 1.4613 29 1 -0.3933 0.4417 -0.7650 30 1 1.7923 -0.5139 -0.8900 31 1 1.5879 2.4585 -1.2243 32 1 1.5616 2.4678 1.2085 33 1 2.5971 0.9247 2.4616 34 1 3.1619 0.1644 4.8678 35 1 3.0527 -1.5681 5.2615 36 1 5.2909 -0.5446 6.3599 37 1 7.4117 -1.8866 5.0645 38 1 7.5202 -0.1541 4.6705 39 1 7.1426 -1.8552 8.4695 40 1 7.8882 -2.7944 7.1046 41 1 7.1289 0.0168 9.4271 42 1 7.9788 1.4643 11.4755 43 1 9.7456 -1.2279 5.9244 44 1 9.7760 0.3659 6.7962 45 1 3.0586 -3.7957 4.2171 46 1 2.3236 -5.7123 2.8718 47 1 1.3451 -5.3725 0.6426 48 1 1.0917 -3.1188 -0.2688 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946166_9818708.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:54:12 Heat of formation + Delta-G solvation = 140.276713 kcal Electronic energy + Delta-G solvation = -32076.955289 eV Core-core repulsion = 27716.936128 eV Total energy + Delta-G solvation = -4360.019160 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 368.164 amu Computer time = 1.05 seconds Orbital eigenvalues (eV) -44.30728 -42.50650 -40.90830 -39.99404 -38.08151 -37.71125 -35.83864 -34.23507 -33.84009 -31.99259 -31.54683 -30.28661 -29.87932 -28.31427 -26.97027 -25.85491 -24.92516 -23.70958 -23.56884 -22.74103 -22.46913 -21.63794 -20.74744 -20.50699 -18.65450 -18.43906 -18.16675 -18.00375 -17.70292 -17.35603 -16.83637 -16.59196 -16.40313 -16.17965 -15.83764 -15.65894 -15.59330 -15.15362 -15.00991 -14.83946 -14.76409 -14.68809 -14.37540 -14.11769 -13.86120 -13.58574 -13.51487 -13.36337 -13.08477 -12.72909 -12.70746 -12.54747 -12.48244 -12.18819 -12.08325 -11.97449 -11.73455 -11.71437 -11.66376 -11.11200 -10.93387 -10.52432 -10.35228 -10.34658 -10.12837 -9.14396 -8.61769 -4.88268 0.15636 0.63887 0.65789 1.33218 1.38793 1.44302 1.52249 1.60098 1.61189 1.64994 1.93443 2.24067 2.95846 3.04266 3.23778 3.46799 3.53882 3.61271 3.64778 3.70446 3.78388 3.81592 3.85927 4.03241 4.10931 4.16587 4.17462 4.24526 4.28703 4.29737 4.32551 4.41898 4.44614 4.58428 4.61897 4.67215 4.72133 4.75869 4.79330 4.80547 4.89413 4.91878 4.96643 5.15615 5.16557 5.26885 5.40197 5.52580 5.67456 5.72910 5.74389 5.76636 6.18993 6.26160 6.52152 6.67409 7.19619 7.52234 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.560 6.560 2 C -0.053 4.053 3 Si 0.761 3.239 4 C -0.182 4.182 5 C 0.073 3.927 6 N -0.466 5.466 7 C 0.086 3.914 8 C 0.492 3.508 9 O -0.569 6.569 10 N -0.709 5.709 11 C 0.135 3.865 12 C -0.113 4.113 13 H 0.114 0.886 14 C -0.118 4.118 15 C 0.095 3.905 16 H 0.124 0.876 17 N -0.268 5.268 18 C -0.032 4.032 19 C -0.069 4.069 20 N -0.320 5.320 21 N -0.132 5.132 22 C -0.131 4.131 23 C 0.092 3.908 24 C -0.132 4.132 25 C -0.107 4.107 26 C -0.154 4.154 27 C -0.088 4.088 28 C -0.119 4.119 29 H 0.389 0.611 30 H 0.072 0.928 31 H -0.285 1.285 32 H -0.277 1.277 33 H 0.193 0.807 34 H 0.158 0.842 35 H 0.145 0.855 36 H 0.421 0.579 37 H 0.068 0.932 38 H 0.058 0.942 39 H 0.103 0.897 40 H 0.126 0.874 41 H 0.235 0.765 42 H 0.213 0.787 43 H 0.123 0.877 44 H 0.066 0.934 45 H 0.138 0.862 46 H 0.147 0.853 47 H 0.137 0.863 48 H 0.119 0.881 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.912 -0.231 1.999 3.539 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.370 6.370 2 C -0.161 4.161 3 Si 0.664 3.336 4 C -0.189 4.189 5 C -0.052 4.052 6 N -0.149 5.149 7 C -0.039 4.039 8 C 0.277 3.723 9 O -0.447 6.447 10 N -0.363 5.363 11 C 0.011 3.989 12 C -0.131 4.131 13 H 0.132 0.868 14 C -0.156 4.156 15 C -0.007 4.007 16 H 0.142 0.858 17 N -0.062 5.062 18 C -0.184 4.184 19 C -0.227 4.227 20 N -0.184 5.184 21 N -0.110 5.110 22 C -0.170 4.170 23 C -0.014 4.014 24 C -0.152 4.152 25 C -0.126 4.126 26 C -0.173 4.173 27 C -0.107 4.107 28 C -0.123 4.123 29 H 0.239 0.761 30 H 0.090 0.910 31 H -0.212 1.212 32 H -0.203 1.203 33 H 0.209 0.791 34 H 0.176 0.824 35 H 0.163 0.837 36 H 0.259 0.741 37 H 0.086 0.914 38 H 0.076 0.924 39 H 0.121 0.879 40 H 0.144 0.856 41 H 0.252 0.748 42 H 0.230 0.770 43 H 0.141 0.859 44 H 0.085 0.915 45 H 0.155 0.845 46 H 0.165 0.835 47 H 0.155 0.845 48 H 0.137 0.863 Dipole moment (debyes) X Y Z Total from point charges -0.939 0.044 2.264 2.451 hybrid contribution -2.117 0.019 -0.535 2.183 sum -3.055 0.063 1.729 3.511 Atomic orbital electron populations 1.86590 1.19182 1.80685 1.50514 1.24357 0.83366 1.11582 0.96827 0.94120 0.90444 0.71371 0.77645 1.19761 1.10127 0.91556 0.97491 1.21908 0.99785 0.95009 0.88541 1.43401 1.51814 1.03754 1.15896 1.22003 0.89145 1.08845 0.83884 1.21291 0.90250 0.76616 0.84109 1.90816 1.75919 1.48321 1.29601 1.45743 1.06910 1.71343 1.12297 1.21260 0.79107 1.01870 0.96647 1.22886 0.95282 0.99726 0.95224 0.86754 1.23560 0.92643 0.99398 1.00045 1.22886 1.03748 0.91987 0.82079 0.85774 1.47458 1.05350 1.31449 1.21924 1.24265 0.96276 0.99828 0.97987 1.24272 0.91527 1.05127 1.01769 1.75104 1.14793 1.13077 1.15467 1.78312 1.14470 1.14207 1.04026 1.23362 0.96509 1.01713 0.95380 1.18412 1.01556 0.87090 0.94300 1.20261 1.04603 0.88802 1.01529 1.21151 0.98081 0.99096 0.94288 1.20926 1.02334 0.96921 0.97092 1.20442 0.99107 0.91681 0.99480 1.19361 1.04224 0.93649 0.95089 0.76115 0.90983 1.21181 1.20291 0.79060 0.82429 0.83709 0.74123 0.91374 0.92374 0.87855 0.85620 0.74840 0.77040 0.85855 0.91544 0.84467 0.83500 0.84515 0.86306 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 14. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -3.37 12.86 -148.98 -1.92 -5.28 16 2 C -0.05 -0.21 3.05 71.24 0.22 0.01 16 3 Si 0.76 -0.50 30.79 68.60 2.11 1.61 16 4 C -0.18 -1.33 5.61 -18.62 -0.10 -1.43 16 5 C 0.07 0.21 9.89 83.00 0.82 1.03 16 6 N -0.47 -0.70 2.27 -519.99 -1.18 -1.88 16 7 C 0.09 -0.76 6.48 85.63 0.55 -0.21 16 8 C 0.49 -2.36 7.90 87.66 0.69 -1.66 16 9 O -0.57 -4.02 16.43 -3.03 -0.05 -4.07 16 10 N -0.71 8.87 5.56 -463.06 -2.57 6.30 16 11 C 0.13 -1.42 5.50 86.38 0.48 -0.95 16 12 C -0.11 1.64 3.33 -10.27 -0.03 1.60 16 13 H 0.11 -1.88 6.99 -2.39 -0.02 -1.89 16 14 C -0.12 1.85 6.89 31.18 0.21 2.07 16 15 C 0.09 -0.82 5.11 45.58 0.23 -0.59 16 16 H 0.12 -1.02 8.14 -2.39 -0.02 -1.04 16 17 N -0.27 0.46 3.52 -324.38 -1.14 -0.68 16 18 C -0.03 0.21 9.69 83.49 0.81 1.02 16 19 C -0.07 0.01 12.05 83.73 1.01 1.02 16 20 N -0.32 -3.12 12.41 -58.25 -0.72 -3.85 16 21 N -0.13 -1.11 13.16 37.02 0.49 -0.62 16 22 C -0.13 1.33 7.44 31.13 0.23 1.56 16 23 C 0.09 0.62 6.81 39.03 0.27 0.88 16 24 C -0.13 -0.49 10.00 22.37 0.22 -0.26 16 25 C -0.11 -0.37 10.01 22.29 0.22 -0.15 16 26 C -0.15 -0.86 9.97 22.03 0.22 -0.64 16 27 C -0.09 -0.79 10.05 22.23 0.22 -0.57 16 28 C -0.12 -1.21 6.35 -20.20 -0.13 -1.34 16 29 H 0.39 -0.94 8.74 -74.06 -0.65 -1.59 16 30 H 0.07 0.19 7.96 -2.39 -0.02 0.17 16 31 H -0.29 -0.97 7.11 99.48 0.71 -0.26 16 32 H -0.28 -0.79 7.04 99.48 0.70 -0.09 16 33 H 0.19 -0.65 6.30 -2.91 -0.02 -0.67 16 34 H 0.16 -2.56 8.12 -2.38 -0.02 -2.58 16 35 H 0.15 -2.07 8.14 -2.38 -0.02 -2.09 16 36 H 0.42 -8.49 8.47 -92.70 -0.79 -9.27 16 37 H 0.07 -0.56 7.87 -2.39 -0.02 -0.58 16 38 H 0.06 -0.36 8.14 -2.39 -0.02 -0.38 16 39 H 0.10 -1.89 6.98 -2.38 -0.02 -1.90 16 40 H 0.13 -2.12 7.92 -2.39 -0.02 -2.14 16 41 H 0.24 -4.08 6.74 -2.91 -0.02 -4.10 16 42 H 0.21 -1.41 8.06 -2.91 -0.02 -1.43 16 43 H 0.12 -1.48 8.10 -2.39 -0.02 -1.50 16 44 H 0.07 -0.37 8.14 -2.39 -0.02 -0.39 16 45 H 0.14 -0.29 8.06 -2.91 -0.02 -0.31 16 46 H 0.15 -0.29 8.06 -2.91 -0.02 -0.31 16 47 H 0.14 0.18 8.06 -2.91 -0.02 0.16 16 48 H 0.12 0.88 8.06 -2.91 -0.02 0.86 16 Total: 0.00 -39.22 404.33 0.78 -38.44 By element: Atomic # 1 Polarization: -30.96 SS G_CDS: -0.39 Total: -31.35 kcal Atomic # 6 Polarization: -4.77 SS G_CDS: 6.15 Total: 1.38 kcal Atomic # 7 Polarization: 4.39 SS G_CDS: -5.13 Total: -0.73 kcal Atomic # 8 Polarization: -7.39 SS G_CDS: -1.97 Total: -9.35 kcal Atomic # 14 Polarization: -0.50 SS G_CDS: 2.11 Total: 1.61 kcal Total: -39.22 0.78 -38.44 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946166_9818708.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 178.720 kcal (2) G-P(sol) polarization free energy of solvation -39.222 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 139.499 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.778 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -38.444 kcal (6) G-S(sol) free energy of system = (1) + (5) 140.277 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.05 seconds