Wall clock time and date at job start Tue Mar 9 2021 12:58:02 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42901 * 1 3 3 C 1.35987 * 117.00096 * 2 1 4 4 C 1.39161 * 120.07553 * 180.02562 * 3 2 1 5 5 O 1.36003 * 120.06896 * 359.97438 * 4 3 2 6 6 C 1.42892 * 116.99592 * 180.02562 * 5 4 3 7 7 C 1.50699 * 109.46959 * 179.97438 * 6 5 4 8 8 O 1.21276 * 120.00025 * 0.02562 * 7 6 5 9 9 N 1.34783 * 120.00180 * 179.97438 * 7 6 5 10 10 C 1.46497 * 120.00028 * 180.02562 * 9 7 6 11 11 C 1.53003 * 109.47017 * 180.02562 * 10 9 7 12 12 H 1.09004 * 112.84496 * 43.80429 * 11 10 9 13 13 C 1.53778 * 113.61196 * 174.99730 * 11 10 9 14 14 C 1.53787 * 87.08035 * 140.06532 * 13 11 10 15 15 H 1.08994 * 113.61447 * 220.02014 * 14 13 11 16 16 N 1.46496 * 113.61210 * 89.11438 * 14 13 11 17 17 C 1.36880 * 126.39903 * 119.71918 * 16 14 13 18 18 C 1.34665 * 106.82356 * 179.84079 * 17 16 14 19 19 N 1.34125 * 108.01550 * 0.42087 * 18 17 16 20 20 C 1.30498 * 109.25803 * 359.73237 * 19 18 17 21 21 C 1.53778 * 113.68969 * 272.53495 * 11 10 9 22 22 C 1.38560 * 119.85478 * 180.24986 * 4 3 2 23 23 C 1.38237 * 120.00010 * 359.47191 * 22 4 3 24 24 C 1.38260 * 120.14692 * 0.50452 * 23 22 4 25 25 C 1.50700 * 119.92753 * 179.74150 * 24 23 22 26 26 O 1.42891 * 109.47494 * 245.02463 * 25 24 23 27 27 Si 1.86298 * 109.47185 * 5.02898 * 25 24 23 28 28 C 1.38243 * 120.14345 * 359.77241 * 24 23 22 29 29 H 1.08993 * 109.47241 * 60.00103 * 1 2 3 30 30 H 1.09002 * 109.47239 * 180.02562 * 1 2 3 31 31 H 1.09005 * 109.47073 * 299.99868 * 1 2 3 32 32 H 1.08994 * 109.47657 * 59.99487 * 6 5 4 33 33 H 1.08999 * 109.46987 * 299.99415 * 6 5 4 34 34 H 0.96999 * 119.99784 * 0.02562 * 9 7 6 35 35 H 1.08994 * 109.47253 * 60.00133 * 10 9 7 36 36 H 1.08999 * 109.47048 * 300.00272 * 10 9 7 37 37 H 1.08998 * 113.61879 * 25.52015 * 13 11 10 38 38 H 1.08999 * 113.61887 * 254.61122 * 13 11 10 39 39 H 1.08010 * 126.58616 * 359.97438 * 17 16 14 40 40 H 1.07996 * 125.99482 * 180.11584 * 18 17 16 41 41 H 1.08005 * 125.64863 * 180.02562 * 20 19 18 42 42 H 1.08993 * 113.61229 * 105.46192 * 21 11 10 43 43 H 1.09000 * 113.61263 * 334.55842 * 21 11 10 44 44 H 1.07996 * 120.00033 * 179.72048 * 22 4 3 45 45 H 1.07997 * 119.93147 * 180.25531 * 23 22 4 46 46 H 1.09004 * 109.46539 * 125.02224 * 25 24 23 47 47 H 0.96695 * 114.00186 * 180.02562 * 26 25 24 48 48 H 1.48500 * 109.99971 * 299.99700 * 27 25 24 49 49 H 1.48506 * 110.00306 * 61.31320 * 27 25 24 50 50 H 1.08004 * 119.99894 * 179.97438 * 28 24 23 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0464 1.2116 0.0000 4 6 3.4360 1.2863 -0.0005 5 8 4.1796 0.1475 -0.0005 6 6 5.6003 0.3005 -0.0005 7 6 6.2518 -1.0583 0.0001 8 8 5.5670 -2.0592 0.0000 9 7 7.5957 -1.1614 -0.0003 10 6 8.2291 -2.4823 -0.0003 11 6 9.7503 -2.3185 -0.0001 12 1 10.0934 -1.5524 0.6952 13 6 10.5130 -3.6482 0.1228 14 6 11.5060 -3.0832 -0.9067 15 1 11.8396 -3.8173 -1.6400 16 7 12.6123 -2.3346 -0.3052 17 6 13.9450 -2.6272 -0.4139 18 6 14.6088 -1.6869 0.2851 19 7 13.7054 -0.8484 0.8142 20 6 12.5074 -1.2301 0.4648 21 6 10.3581 -2.1905 -1.4069 22 6 4.0603 2.5232 0.0047 23 6 3.3030 3.6797 -0.0006 24 6 1.9224 3.6057 -0.0006 25 6 1.1017 4.8696 -0.0005 26 8 0.3652 4.9592 1.2207 27 14 2.2309 6.3433 -0.1543 28 6 1.2932 2.3747 0.0000 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3633 0.5138 0.8900 32 1 5.9066 0.8504 0.8893 33 1 5.9065 0.8502 -0.8906 34 1 8.1435 -0.3608 -0.0006 35 1 7.9226 -3.0323 -0.8900 36 1 7.9231 -3.0319 0.8899 37 1 9.9511 -4.5091 -0.2395 38 1 10.9506 -3.8112 1.1077 39 1 14.3806 -3.4524 -0.9579 40 1 15.6803 -1.6223 0.4035 41 1 11.5849 -0.7432 0.7447 42 1 10.6706 -1.1767 -1.6568 43 1 9.7537 -2.6528 -2.1874 44 1 5.1386 2.5839 0.0089 45 1 3.7908 4.6433 -0.0007 46 1 0.4092 4.8531 -0.8421 47 1 -0.1871 5.7499 1.2898 48 1 3.1801 6.3772 0.9872 49 1 2.9793 6.2783 -1.4354 50 1 0.2146 2.3196 0.0004 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946168_60476.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:02 Heat of formation + Delta-G solvation = 0.759714 kcal Electronic energy + Delta-G solvation = -32817.204265 eV Core-core repulsion = 28201.074912 eV Total energy + Delta-G solvation = -4616.129352 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.07 seconds Orbital eigenvalues (eV) -43.29589 -41.80236 -40.97814 -40.10184 -39.17681 -38.75197 -37.04786 -35.82926 -33.42167 -32.20293 -31.53094 -30.57210 -30.20314 -28.60245 -28.19534 -27.19380 -26.16332 -24.85706 -23.53549 -22.50501 -22.43048 -21.90232 -21.61113 -20.97245 -19.73532 -18.62228 -18.47298 -18.18239 -17.97852 -17.59640 -17.47701 -17.14241 -16.71040 -16.44290 -16.25944 -16.11157 -16.04064 -15.78859 -15.55132 -15.47503 -15.18167 -14.86457 -14.74062 -14.44772 -14.29302 -14.15513 -14.03223 -13.84738 -13.72473 -13.59276 -13.51430 -13.21906 -12.80479 -12.38983 -12.31921 -12.26258 -12.19744 -12.02773 -12.00117 -11.87554 -11.83178 -10.94384 -10.89141 -10.57631 -10.37852 -10.28237 -9.79939 -9.48837 -8.87157 -5.01354 0.15577 0.26120 1.03576 1.23089 1.38616 1.45900 1.59830 1.63753 1.92342 2.24819 2.29708 2.46056 2.51921 2.92278 3.05203 3.27283 3.32954 3.35247 3.45486 3.57191 3.67264 3.72478 3.80923 3.81504 3.86319 3.89230 3.95326 3.97982 4.13266 4.20624 4.23098 4.26887 4.28704 4.30039 4.40941 4.41632 4.49893 4.50641 4.53882 4.57568 4.63915 4.66210 4.76514 4.91121 4.95615 5.04960 5.18171 5.28249 5.35517 5.51405 5.78472 5.93051 6.18557 6.23830 6.51915 6.57492 7.04101 7.12639 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.024 3.976 2 O -0.301 6.301 3 C 0.109 3.891 4 C 0.104 3.896 5 O -0.276 6.276 6 C 0.038 3.962 7 C 0.516 3.484 8 O -0.508 6.508 9 N -0.729 5.729 10 C 0.133 3.867 11 C -0.131 4.131 12 H 0.102 0.898 13 C -0.134 4.134 14 C 0.104 3.896 15 H 0.115 0.885 16 N -0.442 5.442 17 C -0.052 4.052 18 C -0.029 4.029 19 N -0.493 5.493 20 C 0.176 3.824 21 C -0.139 4.139 22 C -0.167 4.167 23 C -0.120 4.120 24 C -0.070 4.070 25 C -0.070 4.070 26 O -0.546 6.546 27 Si 0.684 3.316 28 C -0.143 4.143 29 H 0.056 0.944 30 H 0.104 0.896 31 H 0.057 0.943 32 H 0.094 0.906 33 H 0.094 0.906 34 H 0.402 0.598 35 H 0.075 0.925 36 H 0.075 0.925 37 H 0.108 0.892 38 H 0.083 0.917 39 H 0.175 0.825 40 H 0.171 0.829 41 H 0.201 0.799 42 H 0.082 0.918 43 H 0.108 0.892 44 H 0.139 0.861 45 H 0.124 0.876 46 H 0.074 0.926 47 H 0.382 0.618 48 H -0.250 1.250 49 H -0.254 1.254 50 H 0.142 0.858 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -1.206 2.999 -3.258 4.590 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.071 4.071 2 O -0.214 6.214 3 C 0.063 3.937 4 C 0.058 3.942 5 O -0.188 6.188 6 C -0.041 4.041 7 C 0.301 3.699 8 O -0.381 6.381 9 N -0.383 5.383 10 C 0.009 3.991 11 C -0.150 4.150 12 H 0.120 0.880 13 C -0.173 4.173 14 C 0.000 4.000 15 H 0.133 0.867 16 N -0.126 5.126 17 C -0.185 4.185 18 C -0.177 4.177 19 N -0.210 5.210 20 C -0.106 4.106 21 C -0.177 4.177 22 C -0.186 4.186 23 C -0.138 4.138 24 C -0.070 4.070 25 C -0.180 4.180 26 O -0.352 6.352 27 Si 0.586 3.414 28 C -0.162 4.162 29 H 0.074 0.926 30 H 0.122 0.878 31 H 0.076 0.924 32 H 0.112 0.888 33 H 0.112 0.888 34 H 0.236 0.764 35 H 0.094 0.906 36 H 0.093 0.907 37 H 0.126 0.874 38 H 0.102 0.898 39 H 0.192 0.808 40 H 0.188 0.812 41 H 0.217 0.783 42 H 0.100 0.900 43 H 0.126 0.874 44 H 0.157 0.843 45 H 0.141 0.859 46 H 0.092 0.908 47 H 0.230 0.770 48 H -0.175 1.175 49 H -0.179 1.179 50 H 0.160 0.840 Dipole moment (debyes) X Y Z Total from point charges -0.497 2.151 -2.800 3.566 hybrid contribution -0.006 -0.552 -0.592 0.810 sum -0.503 1.599 -3.393 3.784 Atomic orbital electron populations 1.23145 0.78071 1.04457 1.01405 1.86245 1.21398 1.25208 1.88533 1.18243 0.88954 0.85553 1.00914 1.18231 0.88333 0.85634 1.01989 1.86274 1.15991 1.27630 1.88914 1.22477 0.81375 0.96284 1.03991 1.19999 0.82381 0.90557 0.77005 1.90805 1.62610 1.38008 1.46668 1.45778 1.05928 1.09790 1.76849 1.21370 0.90236 0.84199 1.03246 1.23064 0.94248 0.99523 0.98149 0.88002 1.23370 0.96182 0.97390 1.00331 1.22313 0.85857 0.95117 0.96704 0.86668 1.45279 1.06226 1.22574 1.38475 1.22788 0.82641 1.04634 1.08411 1.22376 0.99712 0.94326 1.01279 1.70344 0.98911 1.27968 1.23813 1.24993 0.98705 0.89529 0.97338 1.23509 0.95761 1.01186 0.97246 1.20927 1.00379 0.90623 1.06681 1.20566 0.93030 0.97629 1.02556 1.19033 0.92735 0.93484 1.01756 1.24658 1.00793 1.02749 0.89812 1.86497 1.63250 1.48504 1.36931 0.95311 0.81221 0.84399 0.80518 1.20923 1.00428 0.90256 1.04555 0.92553 0.87797 0.92393 0.88783 0.88812 0.76354 0.90629 0.90658 0.87370 0.89822 0.80785 0.81191 0.78301 0.89962 0.87416 0.84319 0.85872 0.90782 0.76995 1.17468 1.17915 0.83999 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 0.01 9.81 101.05 0.99 1.01 16 2 O -0.30 -1.49 10.28 -34.20 -0.35 -1.84 16 3 C 0.11 0.49 6.70 -39.12 -0.26 0.22 16 4 C 0.10 0.41 6.70 -39.12 -0.26 0.15 16 5 O -0.28 -1.28 9.45 -47.38 -0.45 -1.73 16 6 C 0.04 0.00 5.22 36.01 0.19 0.18 16 7 C 0.52 0.80 7.91 -10.98 -0.09 0.72 16 8 O -0.51 -3.46 16.50 -14.35 -0.24 -3.70 16 9 N -0.73 1.73 5.56 -60.30 -0.33 1.39 16 10 C 0.13 -0.33 5.51 -4.04 -0.02 -0.36 16 11 C -0.13 0.59 3.25 -89.81 -0.29 0.30 16 12 H 0.10 -0.49 5.64 -51.93 -0.29 -0.78 16 13 C -0.13 0.55 7.35 -25.92 -0.19 0.36 16 14 C 0.10 -0.37 4.88 -67.12 -0.33 -0.70 16 15 H 0.12 -0.52 8.14 -51.93 -0.42 -0.95 16 16 N -0.44 0.34 2.94 -110.59 -0.33 0.02 16 17 C -0.05 0.00 11.58 -16.56 -0.19 -0.20 16 18 C -0.03 -0.06 11.87 -17.81 -0.21 -0.27 16 19 N -0.49 -1.90 11.25 -14.67 -0.17 -2.06 16 20 C 0.18 0.12 11.19 -90.38 -1.01 -0.90 16 21 C -0.14 0.64 7.06 -25.92 -0.18 0.45 16 22 C -0.17 -0.28 9.04 -39.46 -0.36 -0.64 16 23 C -0.12 -0.27 8.66 -39.57 -0.34 -0.61 16 24 C -0.07 -0.18 5.38 -104.61 -0.56 -0.74 16 25 C -0.07 0.01 2.79 36.01 0.10 0.11 16 26 O -0.55 -0.03 12.81 -35.23 -0.45 -0.48 16 27 Si 0.68 -0.94 29.84 -169.99 -5.07 -6.01 16 28 C -0.14 -0.41 8.67 -39.46 -0.34 -0.75 16 29 H 0.06 -0.04 7.66 -51.93 -0.40 -0.44 16 30 H 0.10 -0.09 8.14 -51.93 -0.42 -0.51 16 31 H 0.06 -0.01 7.66 -51.93 -0.40 -0.41 16 32 H 0.09 -0.25 7.65 -51.93 -0.40 -0.65 16 33 H 0.09 -0.27 7.67 -51.93 -0.40 -0.67 16 34 H 0.40 -2.19 8.47 -40.82 -0.35 -2.54 16 35 H 0.08 -0.14 7.85 -51.93 -0.41 -0.54 16 36 H 0.08 -0.08 8.14 -51.93 -0.42 -0.51 16 37 H 0.11 -0.54 8.10 -51.93 -0.42 -0.96 16 38 H 0.08 -0.23 8.14 -51.93 -0.42 -0.65 16 39 H 0.17 -0.46 8.06 -52.48 -0.42 -0.88 16 40 H 0.17 0.05 8.06 -52.49 -0.42 -0.37 16 41 H 0.20 -0.48 5.86 -52.48 -0.31 -0.78 16 42 H 0.08 -0.33 8.02 -51.93 -0.42 -0.74 16 43 H 0.11 -0.55 7.90 -51.93 -0.41 -0.96 16 44 H 0.14 -0.22 6.30 -52.49 -0.33 -0.55 16 45 H 0.12 0.15 4.85 -52.49 -0.25 -0.10 16 46 H 0.07 -0.14 7.96 -51.93 -0.41 -0.55 16 47 H 0.38 -1.93 8.74 45.56 0.40 -1.53 16 48 H -0.25 -0.42 7.05 56.52 0.40 -0.02 16 49 H -0.25 -0.25 7.11 56.52 0.40 0.16 16 50 H 0.14 0.16 6.30 -52.48 -0.33 -0.17 16 LS Contribution 411.69 15.07 6.20 6.20 Total: 0.00 -14.59 411.69 -11.41 -26.00 By element: Atomic # 1 Polarization: -9.26 SS G_CDS: -6.86 Total: -16.12 kcal Atomic # 6 Polarization: 1.70 SS G_CDS: -3.36 Total: -1.67 kcal Atomic # 7 Polarization: 0.17 SS G_CDS: -0.83 Total: -0.65 kcal Atomic # 8 Polarization: -6.26 SS G_CDS: -1.49 Total: -7.75 kcal Atomic # 14 Polarization: -0.94 SS G_CDS: -5.07 Total: -6.01 kcal Total LS contribution 6.20 Total: 6.20 kcal Total: -14.59 -11.41 -26.00 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_60476.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 26.756 kcal (2) G-P(sol) polarization free energy of solvation -14.587 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 12.168 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.409 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -25.996 kcal (6) G-S(sol) free energy of system = (1) + (5) 0.760 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.07 seconds