Wall clock time and date at job start Tue Mar 9 2021 12:58:33 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86305 * 109.47435 * 2 1 4 4 C 1.50709 * 109.47176 * 119.99688 * 2 1 3 5 5 C 1.34233 * 126.50256 * 254.98123 * 4 2 1 6 6 N 1.36824 * 109.94057 * 180.02562 * 5 4 2 7 7 C 1.46500 * 125.06496 * 179.97438 * 6 5 4 8 8 C 1.50708 * 109.46781 * 264.99492 * 7 6 5 9 9 O 1.21276 * 119.99868 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99612 * 179.97438 * 8 7 6 11 11 C 1.46505 * 119.99637 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.46963 * 179.97438 * 11 10 8 13 13 H 1.09004 * 112.85360 * 316.19795 * 12 11 10 14 14 C 1.53784 * 113.61607 * 87.50384 * 12 11 10 15 15 C 1.53770 * 87.08328 * 139.98101 * 14 12 11 16 16 H 1.09001 * 113.69542 * 220.00771 * 15 14 12 17 17 N 1.46503 * 113.61571 * 89.12043 * 15 14 12 18 18 C 1.36878 * 126.39934 * 142.22105 * 17 15 14 19 19 C 1.34669 * 106.81664 * 179.83941 * 18 17 15 20 20 N 1.34122 * 108.02221 * 0.41626 * 19 18 17 21 21 C 1.30503 * 109.25518 * 359.73665 * 20 19 18 22 22 C 1.53782 * 87.08362 * 334.56690 * 15 14 12 23 23 C 1.37698 * 109.87297 * 359.97438 * 6 5 4 24 24 C 1.39083 * 133.51398 * 180.02562 * 23 6 5 25 25 C 1.37795 * 119.77690 * 179.97438 * 24 23 6 26 26 C 1.38789 * 120.66819 * 359.97438 * 25 24 23 27 27 C 1.36668 * 120.52306 * 0.02562 * 26 25 24 28 28 C 1.39586 * 119.76775 * 359.97438 * 27 26 25 29 29 H 0.96699 * 113.99519 * 300.00370 * 1 2 3 30 30 H 1.08993 * 109.47614 * 239.99666 * 2 1 3 31 31 H 1.48499 * 109.99713 * 299.99795 * 3 2 1 32 32 H 1.48506 * 109.99757 * 61.31566 * 3 2 1 33 33 H 1.08004 * 125.03123 * 0.02562 * 5 4 2 34 34 H 1.08997 * 109.47242 * 24.99277 * 7 6 5 35 35 H 1.09001 * 109.47361 * 144.99782 * 7 6 5 36 36 H 0.96997 * 120.00568 * 0.02562 * 10 8 7 37 37 H 1.08997 * 109.46948 * 299.99875 * 11 10 8 38 38 H 1.09001 * 109.47020 * 59.99990 * 11 10 8 39 39 H 1.09000 * 113.61223 * 254.53078 * 14 12 11 40 40 H 1.09002 * 113.61408 * 25.42894 * 14 12 11 41 41 H 1.08002 * 126.59423 * 359.97438 * 18 17 15 42 42 H 1.08006 * 125.98902 * 180.11073 * 19 18 17 43 43 H 1.08000 * 125.64951 * 180.02562 * 21 20 19 44 44 H 1.08990 * 113.61788 * 270.88679 * 22 15 14 45 45 H 1.09002 * 113.68757 * 139.98913 * 22 15 14 46 46 H 1.07998 * 120.11656 * 359.97438 * 24 23 6 47 47 H 1.07999 * 119.66491 * 179.72033 * 25 24 23 48 48 H 1.08000 * 119.73737 * 179.97438 * 26 25 24 49 49 H 1.08004 * 120.11088 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2306 5 6 2.4612 -0.1376 2.3229 6 7 2.8036 -1.0989 3.2343 7 6 3.4093 -0.8403 4.5429 8 6 4.9075 -0.9631 4.4360 9 8 5.4188 -1.2399 3.3717 10 7 5.6791 -0.7654 5.5233 11 6 7.1356 -0.8843 5.4192 12 6 7.7682 -0.6131 6.7856 13 1 7.3290 0.2461 7.2925 14 6 7.8779 -1.8643 7.6730 15 6 9.2598 -1.3433 8.1012 16 1 10.0142 -2.1249 8.1905 17 7 9.2175 -0.4578 9.2676 18 6 10.1339 -0.4079 10.2832 19 6 9.7142 0.5422 11.1403 20 7 8.5679 1.0519 10.6660 21 6 8.2642 0.4578 9.5444 22 6 9.3057 -0.5932 6.7596 23 6 2.4941 -2.3456 2.7384 24 6 2.6287 -3.6361 3.2394 25 6 2.2139 -4.7106 2.4831 26 6 1.6614 -4.5191 1.2244 27 6 1.5198 -3.2598 0.7128 28 6 1.9333 -2.1569 1.4618 29 1 -0.3932 0.4418 0.7650 30 1 1.7924 -0.5138 -0.8899 31 1 1.5616 2.4678 -1.2085 32 1 1.5879 2.4586 1.2243 33 1 2.5971 0.9248 2.4617 34 1 3.1497 0.1662 4.8709 35 1 3.0359 -1.5657 5.2659 36 1 5.2701 -0.5444 6.3746 37 1 7.3955 -1.8908 5.0914 38 1 7.5086 -0.1589 4.6961 39 1 7.1501 -1.8894 8.4841 40 1 7.9180 -2.7968 7.1099 41 1 11.0237 -1.0126 10.3777 42 1 10.2107 0.8380 12.0527 43 1 7.3948 0.6643 8.9379 44 1 9.7362 -1.1780 5.9468 45 1 9.7307 0.4080 6.8319 46 1 3.0570 -3.7955 4.2179 47 1 2.3235 -5.7121 2.8720 48 1 1.3416 -5.3721 0.6443 49 1 1.0886 -3.1184 -0.2673 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946168_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:33 Heat of formation + Delta-G solvation = 106.517821 kcal Electronic energy + Delta-G solvation = -31978.332261 eV Core-core repulsion = 27682.275117 eV Total energy + Delta-G solvation = -4296.057145 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 1.02 seconds Orbital eigenvalues (eV) -43.33128 -42.51181 -40.95531 -39.98832 -38.05809 -37.63563 -35.91567 -34.13323 -33.39928 -31.52197 -30.39344 -30.15869 -29.80942 -28.32119 -27.24270 -25.82054 -24.76235 -23.62361 -22.63659 -22.52909 -21.95796 -21.68328 -21.05050 -20.60645 -18.79011 -18.51260 -18.02996 -17.80454 -17.41931 -16.97112 -16.75934 -16.37596 -16.31292 -16.19242 -16.04324 -15.74484 -15.47553 -15.36080 -14.98109 -14.79491 -14.73776 -14.67021 -14.49854 -14.33042 -14.01198 -13.89753 -13.78025 -13.64184 -13.40455 -13.16110 -12.62478 -12.48769 -12.36885 -12.30285 -12.08160 -11.92914 -11.90129 -11.64875 -11.15874 -10.93785 -10.61287 -10.45294 -10.37128 -10.35854 -9.52032 -9.05395 -8.56229 -4.88131 0.24919 0.76645 1.00305 1.33273 1.36503 1.38504 1.60096 1.60548 1.67194 2.01322 2.03669 2.21684 2.87490 2.98735 3.09191 3.22727 3.30271 3.43194 3.44687 3.53139 3.57344 3.70485 3.77296 3.78122 3.83114 3.90882 3.93051 4.03651 4.18093 4.25287 4.28863 4.33889 4.36149 4.45210 4.46586 4.52725 4.57465 4.60684 4.69802 4.73143 4.78641 4.86004 4.87823 4.97000 5.10993 5.23004 5.24668 5.61854 5.75292 5.78064 5.83599 5.87416 6.07267 6.15270 6.26284 6.33244 6.58051 6.92505 7.09371 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.531 6.531 2 C -0.037 4.037 3 Si 0.682 3.318 4 C -0.193 4.193 5 C 0.066 3.934 6 N -0.466 5.466 7 C 0.091 3.909 8 C 0.491 3.509 9 O -0.511 6.511 10 N -0.729 5.729 11 C 0.132 3.868 12 C -0.131 4.131 13 H 0.102 0.898 14 C -0.139 4.139 15 C 0.105 3.895 16 H 0.115 0.885 17 N -0.442 5.442 18 C -0.052 4.052 19 C -0.029 4.029 20 N -0.492 5.492 21 C 0.176 3.824 22 C -0.134 4.134 23 C 0.109 3.891 24 C -0.128 4.128 25 C -0.096 4.096 26 C -0.146 4.146 27 C -0.064 4.064 28 C -0.086 4.086 29 H 0.373 0.627 30 H 0.114 0.886 31 H -0.256 1.256 32 H -0.260 1.260 33 H 0.168 0.832 34 H 0.122 0.878 35 H 0.118 0.882 36 H 0.402 0.598 37 H 0.074 0.926 38 H 0.074 0.926 39 H 0.082 0.918 40 H 0.107 0.893 41 H 0.175 0.825 42 H 0.171 0.829 43 H 0.200 0.800 44 H 0.107 0.893 45 H 0.083 0.917 46 H 0.114 0.886 47 H 0.125 0.875 48 H 0.123 0.877 49 H 0.123 0.877 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.223 -1.281 3.337 4.813 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.337 6.337 2 C -0.147 4.147 3 Si 0.583 3.417 4 C -0.200 4.200 5 C -0.059 4.059 6 N -0.149 5.149 7 C -0.035 4.035 8 C 0.274 3.726 9 O -0.384 6.384 10 N -0.383 5.383 11 C 0.008 3.992 12 C -0.149 4.149 13 H 0.120 0.880 14 C -0.177 4.177 15 C 0.000 4.000 16 H 0.133 0.867 17 N -0.126 5.126 18 C -0.184 4.184 19 C -0.177 4.177 20 N -0.210 5.210 21 C -0.106 4.106 22 C -0.173 4.173 23 C 0.004 3.996 24 C -0.149 4.149 25 C -0.116 4.116 26 C -0.165 4.165 27 C -0.083 4.083 28 C -0.090 4.090 29 H 0.220 0.780 30 H 0.132 0.868 31 H -0.180 1.180 32 H -0.185 1.185 33 H 0.186 0.814 34 H 0.140 0.860 35 H 0.135 0.865 36 H 0.236 0.764 37 H 0.092 0.908 38 H 0.092 0.908 39 H 0.100 0.900 40 H 0.125 0.875 41 H 0.192 0.808 42 H 0.188 0.812 43 H 0.217 0.783 44 H 0.126 0.874 45 H 0.102 0.898 46 H 0.132 0.868 47 H 0.143 0.857 48 H 0.141 0.859 49 H 0.141 0.859 Dipole moment (debyes) X Y Z Total from point charges 3.170 -0.334 2.540 4.076 hybrid contribution -0.548 -0.715 0.807 1.210 sum 2.621 -1.049 3.347 4.379 Atomic orbital electron populations 1.86607 1.18140 1.79959 1.48970 1.24283 0.83292 1.09818 0.97348 0.95045 0.91768 0.74468 0.80405 1.20585 1.09756 0.92347 0.97328 1.21581 1.00905 0.94014 0.89389 1.43196 1.52543 1.04680 1.14500 1.21584 0.90777 1.05842 0.85296 1.20997 0.89493 0.77644 0.84422 1.90824 1.74630 1.45360 1.27622 1.45933 1.07385 1.72824 1.12143 1.21362 0.78849 1.02621 0.96329 1.23059 0.96818 0.99109 0.95959 0.88027 1.23504 0.95662 0.98614 0.99912 1.22310 1.00524 0.92772 0.84366 0.86693 1.45279 1.19769 1.29441 1.18094 1.22790 0.98395 1.05722 0.91541 1.22381 0.95344 0.98223 1.01723 1.70345 1.14953 1.26572 1.09154 1.24980 0.96623 0.92123 0.96843 1.23365 0.95154 1.02428 0.96335 1.18170 1.01227 0.85831 0.94339 1.19945 1.05067 0.89254 1.00614 1.20827 0.98305 0.97921 0.94503 1.20677 1.02438 0.96958 0.96398 1.20315 0.97885 0.90911 0.99189 1.18936 1.03362 0.92782 0.93926 0.78025 0.86783 1.18013 1.18515 0.81449 0.85994 0.86455 0.76373 0.90776 0.90752 0.89972 0.87480 0.80778 0.81182 0.78321 0.87419 0.89827 0.86794 0.85742 0.85909 0.85890 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.31 12.88 -35.23 -0.45 -1.77 16 2 C -0.04 -0.05 3.06 36.01 0.11 0.06 16 3 Si 0.68 -0.17 30.82 -169.99 -5.24 -5.41 16 4 C -0.19 -0.42 5.58 -102.71 -0.57 -0.99 16 5 C 0.07 0.05 9.89 -16.74 -0.17 -0.12 16 6 N -0.47 -0.39 2.27 -115.71 -0.26 -0.65 16 7 C 0.09 -0.28 6.48 -5.19 -0.03 -0.31 16 8 C 0.49 -0.56 7.90 -10.98 -0.09 -0.65 16 9 O -0.51 -2.00 16.42 5.56 0.09 -1.91 16 10 N -0.73 3.11 5.56 -60.29 -0.33 2.78 16 11 C 0.13 -0.51 5.51 -4.04 -0.02 -0.53 16 12 C -0.13 0.72 3.25 -89.81 -0.29 0.43 16 13 H 0.10 -0.59 5.64 -51.93 -0.29 -0.89 16 14 C -0.14 0.75 7.05 -25.92 -0.18 0.57 16 15 C 0.10 -0.44 4.88 -67.12 -0.33 -0.77 16 16 H 0.12 -0.59 8.14 -51.93 -0.42 -1.01 16 17 N -0.44 0.62 2.94 -110.60 -0.33 0.30 16 18 C -0.05 0.02 11.58 -16.56 -0.19 -0.17 16 19 C -0.03 -0.05 11.87 -17.82 -0.21 -0.26 16 20 N -0.49 -1.60 11.25 -14.66 -0.16 -1.77 16 21 C 0.18 -0.01 11.19 -90.37 -1.01 -1.02 16 22 C -0.13 0.65 7.35 -25.92 -0.19 0.46 16 23 C 0.11 0.33 6.80 -83.99 -0.57 -0.24 16 24 C -0.13 -0.27 10.00 -39.43 -0.39 -0.67 16 25 C -0.10 -0.18 10.01 -39.54 -0.40 -0.57 16 26 C -0.15 -0.34 9.97 -39.95 -0.40 -0.73 16 27 C -0.06 -0.22 10.05 -39.65 -0.40 -0.61 16 28 C -0.09 -0.33 6.35 -105.14 -0.67 -1.00 16 29 H 0.37 -0.21 8.70 45.56 0.40 0.19 16 30 H 0.11 0.14 7.96 -51.93 -0.41 -0.28 16 31 H -0.26 -0.75 7.11 56.52 0.40 -0.35 16 32 H -0.26 -0.16 7.00 56.52 0.40 0.23 16 33 H 0.17 -0.32 6.27 -52.48 -0.33 -0.65 16 34 H 0.12 -0.74 8.12 -51.93 -0.42 -1.17 16 35 H 0.12 -0.60 8.14 -51.93 -0.42 -1.02 16 36 H 0.40 -2.86 8.47 -40.82 -0.35 -3.21 16 37 H 0.07 -0.21 7.84 -51.93 -0.41 -0.62 16 38 H 0.07 -0.18 8.14 -51.93 -0.42 -0.61 16 39 H 0.08 -0.39 8.02 -51.93 -0.42 -0.81 16 40 H 0.11 -0.62 7.90 -51.93 -0.41 -1.03 16 41 H 0.17 -0.54 8.06 -52.49 -0.42 -0.97 16 42 H 0.17 -0.02 8.06 -52.48 -0.42 -0.45 16 43 H 0.20 -0.64 5.86 -52.49 -0.31 -0.95 16 44 H 0.11 -0.61 8.10 -51.93 -0.42 -1.03 16 45 H 0.08 -0.29 8.14 -51.93 -0.42 -0.72 16 46 H 0.11 0.01 8.06 -52.49 -0.42 -0.41 16 47 H 0.12 -0.04 8.06 -52.49 -0.42 -0.47 16 48 H 0.12 0.05 8.06 -52.49 -0.42 -0.37 16 49 H 0.12 0.30 8.06 -52.48 -0.42 -0.12 16 LS Contribution 408.81 15.07 6.16 6.16 Total: 0.00 -12.76 408.81 -13.33 -26.09 By element: Atomic # 1 Polarization: -9.89 SS G_CDS: -6.80 Total: -16.69 kcal Atomic # 6 Polarization: -1.13 SS G_CDS: -6.00 Total: -7.13 kcal Atomic # 7 Polarization: 1.75 SS G_CDS: -1.09 Total: 0.66 kcal Atomic # 8 Polarization: -3.32 SS G_CDS: -0.36 Total: -3.68 kcal Atomic # 14 Polarization: -0.17 SS G_CDS: -5.24 Total: -5.41 kcal Total LS contribution 6.16 Total: 6.16 kcal Total: -12.76 -13.33 -26.09 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 132.609 kcal (2) G-P(sol) polarization free energy of solvation -12.758 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 119.850 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -13.333 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.091 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.518 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.02 seconds