Wall clock time and date at job start Tue Mar 9 2021 12:58:32 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42900 * 1 3 3 Si 1.86305 * 109.47435 * 2 1 4 4 C 1.50709 * 109.47176 * 119.99688 * 2 1 3 5 5 C 1.34233 * 126.50256 * 254.98123 * 4 2 1 6 6 N 1.36824 * 109.94057 * 180.02562 * 5 4 2 7 7 C 1.46500 * 125.06496 * 179.97438 * 6 5 4 8 8 C 1.50708 * 109.46781 * 264.99492 * 7 6 5 9 9 O 1.21276 * 119.99868 * 359.97438 * 8 7 6 10 10 N 1.34773 * 119.99612 * 179.97438 * 8 7 6 11 11 C 1.46505 * 119.99637 * 180.02562 * 10 8 7 12 12 C 1.52998 * 109.46963 * 179.97438 * 11 10 8 13 13 H 1.09004 * 112.85360 * 316.19795 * 12 11 10 14 14 C 1.53784 * 113.61607 * 87.50384 * 12 11 10 15 15 C 1.53770 * 87.08328 * 139.98101 * 14 12 11 16 16 H 1.09001 * 113.69542 * 220.00771 * 15 14 12 17 17 N 1.46503 * 113.61571 * 89.12043 * 15 14 12 18 18 C 1.36878 * 126.39934 * 142.22105 * 17 15 14 19 19 C 1.34669 * 106.81664 * 179.83941 * 18 17 15 20 20 N 1.34122 * 108.02221 * 0.41626 * 19 18 17 21 21 C 1.30503 * 109.25518 * 359.73665 * 20 19 18 22 22 C 1.53782 * 87.08362 * 334.56690 * 15 14 12 23 23 C 1.37698 * 109.87297 * 359.97438 * 6 5 4 24 24 C 1.39083 * 133.51398 * 180.02562 * 23 6 5 25 25 C 1.37795 * 119.77690 * 179.97438 * 24 23 6 26 26 C 1.38789 * 120.66819 * 359.97438 * 25 24 23 27 27 C 1.36668 * 120.52306 * 0.02562 * 26 25 24 28 28 C 1.39586 * 119.76775 * 359.97438 * 27 26 25 29 29 H 0.96699 * 113.99519 * 300.00370 * 1 2 3 30 30 H 1.08993 * 109.47614 * 239.99666 * 2 1 3 31 31 H 1.48499 * 109.99713 * 299.99795 * 3 2 1 32 32 H 1.48506 * 109.99757 * 61.31566 * 3 2 1 33 33 H 1.08004 * 125.03123 * 0.02562 * 5 4 2 34 34 H 1.08997 * 109.47242 * 24.99277 * 7 6 5 35 35 H 1.09001 * 109.47361 * 144.99782 * 7 6 5 36 36 H 0.96997 * 120.00568 * 0.02562 * 10 8 7 37 37 H 1.08997 * 109.46948 * 299.99875 * 11 10 8 38 38 H 1.09001 * 109.47020 * 59.99990 * 11 10 8 39 39 H 1.09000 * 113.61223 * 254.53078 * 14 12 11 40 40 H 1.09002 * 113.61408 * 25.42894 * 14 12 11 41 41 H 1.08002 * 126.59423 * 359.97438 * 18 17 15 42 42 H 1.08006 * 125.98902 * 180.11073 * 19 18 17 43 43 H 1.08000 * 125.64951 * 180.02562 * 21 20 19 44 44 H 1.08990 * 113.61788 * 270.88679 * 22 15 14 45 45 H 1.09002 * 113.68757 * 139.98913 * 22 15 14 46 46 H 1.07998 * 120.11656 * 359.97438 * 24 23 6 47 47 H 1.07999 * 119.66491 * 179.72033 * 25 24 23 48 48 H 1.08000 * 119.73737 * 179.97438 * 26 25 24 49 49 H 1.08004 * 120.11088 * 180.02562 * 27 26 25 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7565 0.0000 4 6 1.9314 -0.7104 1.2306 5 6 2.4612 -0.1376 2.3229 6 7 2.8036 -1.0989 3.2343 7 6 3.4093 -0.8403 4.5429 8 6 4.9075 -0.9631 4.4360 9 8 5.4188 -1.2399 3.3717 10 7 5.6791 -0.7654 5.5233 11 6 7.1356 -0.8843 5.4192 12 6 7.7682 -0.6131 6.7856 13 1 7.3290 0.2461 7.2925 14 6 7.8779 -1.8643 7.6730 15 6 9.2598 -1.3433 8.1012 16 1 10.0142 -2.1249 8.1905 17 7 9.2175 -0.4578 9.2676 18 6 10.1339 -0.4079 10.2832 19 6 9.7142 0.5422 11.1403 20 7 8.5679 1.0519 10.6660 21 6 8.2642 0.4578 9.5444 22 6 9.3057 -0.5932 6.7596 23 6 2.4941 -2.3456 2.7384 24 6 2.6287 -3.6361 3.2394 25 6 2.2139 -4.7106 2.4831 26 6 1.6614 -4.5191 1.2244 27 6 1.5198 -3.2598 0.7128 28 6 1.9333 -2.1569 1.4618 29 1 -0.3932 0.4418 0.7650 30 1 1.7924 -0.5138 -0.8899 31 1 1.5616 2.4678 -1.2085 32 1 1.5879 2.4586 1.2243 33 1 2.5971 0.9248 2.4617 34 1 3.1497 0.1662 4.8709 35 1 3.0359 -1.5657 5.2659 36 1 5.2701 -0.5444 6.3746 37 1 7.3955 -1.8908 5.0914 38 1 7.5086 -0.1589 4.6961 39 1 7.1501 -1.8894 8.4841 40 1 7.9180 -2.7968 7.1099 41 1 11.0237 -1.0126 10.3777 42 1 10.2107 0.8380 12.0527 43 1 7.3948 0.6643 8.9379 44 1 9.7362 -1.1780 5.9468 45 1 9.7307 0.4080 6.8319 46 1 3.0570 -3.7955 4.2179 47 1 2.3235 -5.7121 2.8720 48 1 1.3416 -5.3721 0.6443 49 1 1.0886 -3.1184 -0.2673 There are 67 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 67 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946168_9818708.mol2 49 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 12:58:32 Heat of formation + Delta-G solvation = 106.549033 kcal Electronic energy + Delta-G solvation = -31978.330908 eV Core-core repulsion = 27682.275117 eV Total energy + Delta-G solvation = -4296.055791 eV No. of doubly occupied orbitals = 67 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 367.168 amu Computer time = 0.99 seconds Orbital eigenvalues (eV) -43.20957 -42.52826 -40.79438 -39.77528 -38.15224 -37.70852 -35.75848 -34.12038 -33.29321 -31.54194 -30.33536 -30.23983 -29.71124 -28.16862 -26.84384 -25.80167 -24.57856 -23.69455 -22.67377 -22.41585 -21.79941 -21.57486 -20.84698 -20.62078 -18.72227 -18.41725 -17.80710 -17.73579 -17.38486 -16.81458 -16.61139 -16.40817 -16.20909 -16.11530 -15.94615 -15.62392 -15.48464 -15.29101 -14.89625 -14.78045 -14.72192 -14.60183 -14.41989 -14.27172 -14.06932 -13.64187 -13.55411 -13.46309 -13.24824 -12.97073 -12.72226 -12.56808 -12.39908 -12.01154 -11.99026 -11.76180 -11.73632 -11.59615 -11.10610 -10.91382 -10.54716 -10.50784 -10.45219 -10.14835 -9.47604 -9.15827 -8.63091 -4.86881 0.14427 0.64366 1.10026 1.34977 1.42297 1.49913 1.58074 1.68795 1.80372 1.97244 2.20545 2.23278 2.95334 3.24133 3.35573 3.53641 3.59832 3.64329 3.67817 3.68276 3.72564 3.79978 3.84338 3.98109 4.03685 4.15597 4.22099 4.24666 4.25042 4.30432 4.49897 4.51092 4.58792 4.59188 4.66756 4.71316 4.72071 4.77751 4.79352 4.80747 4.89703 4.91691 4.95488 5.14097 5.22593 5.34488 5.41010 5.51161 5.66739 5.73901 5.75455 5.81034 6.19001 6.23966 6.29815 6.48885 6.60079 7.13626 7.16279 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.553 6.553 2 C -0.050 4.050 3 Si 0.765 3.235 4 C -0.216 4.216 5 C 0.074 3.926 6 N -0.466 5.466 7 C 0.086 3.914 8 C 0.492 3.508 9 O -0.568 6.568 10 N -0.711 5.711 11 C 0.135 3.865 12 C -0.118 4.118 13 H 0.109 0.891 14 C -0.129 4.129 15 C 0.097 3.903 16 H 0.128 0.872 17 N -0.439 5.439 18 C -0.048 4.048 19 C -0.063 4.063 20 N -0.542 5.542 21 C 0.175 3.825 22 C -0.131 4.131 23 C 0.091 3.909 24 C -0.133 4.133 25 C -0.107 4.107 26 C -0.154 4.154 27 C -0.088 4.088 28 C -0.116 4.116 29 H 0.384 0.616 30 H 0.103 0.897 31 H -0.303 1.303 32 H -0.260 1.260 33 H 0.197 0.803 34 H 0.160 0.840 35 H 0.142 0.858 36 H 0.419 0.581 37 H 0.065 0.935 38 H 0.060 0.940 39 H 0.082 0.918 40 H 0.115 0.885 41 H 0.199 0.801 42 H 0.174 0.826 43 H 0.226 0.774 44 H 0.117 0.883 45 H 0.071 0.929 46 H 0.134 0.866 47 H 0.146 0.854 48 H 0.136 0.864 49 H 0.118 0.882 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 3.608 -1.285 4.810 6.148 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.361 6.361 2 C -0.159 4.159 3 Si 0.668 3.332 4 C -0.223 4.223 5 C -0.051 4.051 6 N -0.148 5.148 7 C -0.039 4.039 8 C 0.277 3.723 9 O -0.446 6.446 10 N -0.365 5.365 11 C 0.011 3.989 12 C -0.137 4.137 13 H 0.127 0.873 14 C -0.167 4.167 15 C -0.006 4.006 16 H 0.145 0.855 17 N -0.121 5.121 18 C -0.182 4.182 19 C -0.210 4.210 20 N -0.260 5.260 21 C -0.108 4.108 22 C -0.170 4.170 23 C -0.014 4.014 24 C -0.154 4.154 25 C -0.126 4.126 26 C -0.173 4.173 27 C -0.107 4.107 28 C -0.120 4.120 29 H 0.232 0.768 30 H 0.121 0.879 31 H -0.230 1.230 32 H -0.185 1.185 33 H 0.213 0.787 34 H 0.177 0.823 35 H 0.160 0.840 36 H 0.256 0.744 37 H 0.083 0.917 38 H 0.078 0.922 39 H 0.100 0.900 40 H 0.134 0.866 41 H 0.216 0.784 42 H 0.191 0.809 43 H 0.242 0.758 44 H 0.135 0.865 45 H 0.089 0.911 46 H 0.152 0.848 47 H 0.163 0.837 48 H 0.154 0.846 49 H 0.136 0.864 Dipole moment (debyes) X Y Z Total from point charges 3.560 -0.359 4.087 5.432 hybrid contribution -0.646 -0.746 0.332 1.041 sum 2.914 -1.105 4.419 5.407 Atomic orbital electron populations 1.86562 1.19101 1.80587 1.49859 1.24577 0.82796 1.11595 0.96928 0.94066 0.90402 0.71135 0.77589 1.20702 1.11337 0.91917 0.98362 1.22002 0.99258 0.95174 0.88711 1.43428 1.51932 1.03817 1.15633 1.21985 0.89135 1.08815 0.83937 1.21321 0.90367 0.76618 0.84020 1.90811 1.75698 1.48309 1.29823 1.45809 1.07160 1.71270 1.12263 1.21288 0.79046 1.01696 0.96837 1.22968 0.96261 0.99439 0.94987 0.87295 1.23466 0.94730 0.98811 0.99685 1.22549 1.01808 0.92731 0.83506 0.85461 1.45441 1.19038 1.29230 1.18419 1.23162 0.98908 1.05015 0.91082 1.22641 0.95827 0.99652 1.02883 1.70277 1.16225 1.28479 1.11067 1.25438 0.97305 0.91745 0.96265 1.23361 0.95537 1.01828 0.96268 1.18400 1.01544 0.87020 0.94403 1.20247 1.04628 0.89026 1.01450 1.21134 0.98126 0.99045 0.94320 1.20919 1.02367 0.96995 0.97006 1.20450 0.99084 0.91736 0.99429 1.19334 1.04053 0.93769 0.94873 0.76752 0.87864 1.23037 1.18509 0.78680 0.82271 0.84017 0.74353 0.91655 0.92178 0.89981 0.86636 0.78405 0.80915 0.75834 0.86476 0.91063 0.84808 0.83670 0.84645 0.86424 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.55 -3.60 12.88 -148.98 -1.92 -5.52 16 2 C -0.05 -0.20 3.06 71.24 0.22 0.02 16 3 Si 0.77 -0.38 30.82 68.60 2.11 1.73 16 4 C -0.22 -1.14 5.58 -18.63 -0.10 -1.24 16 5 C 0.07 0.05 9.89 83.00 0.82 0.87 16 6 N -0.47 -0.33 2.27 -519.99 -1.18 -1.51 16 7 C 0.09 -0.73 6.48 85.64 0.56 -0.17 16 8 C 0.49 -1.81 7.90 87.66 0.69 -1.12 16 9 O -0.57 -4.46 16.42 -3.02 -0.05 -4.50 16 10 N -0.71 7.44 5.56 -463.05 -2.57 4.87 16 11 C 0.14 -1.20 5.51 86.38 0.48 -0.72 16 12 C -0.12 1.50 3.25 -10.27 -0.03 1.46 16 13 H 0.11 -1.51 5.64 -2.39 -0.01 -1.53 16 14 C -0.13 1.65 7.05 31.12 0.22 1.87 16 15 C 0.10 -0.97 4.88 45.51 0.22 -0.75 16 16 H 0.13 -1.55 8.14 -2.39 -0.02 -1.57 16 17 N -0.44 1.66 2.94 -503.82 -1.48 0.17 16 18 C -0.05 0.06 11.58 83.09 0.96 1.03 16 19 C -0.06 -0.25 11.87 83.52 0.99 0.74 16 20 N -0.54 -3.83 11.25 -200.31 -2.25 -6.08 16 21 C 0.17 -0.12 11.19 180.26 2.02 1.89 16 22 C -0.13 1.44 7.35 31.12 0.23 1.66 16 23 C 0.09 0.58 6.80 39.03 0.27 0.84 16 24 C -0.13 -0.55 10.00 22.37 0.22 -0.32 16 25 C -0.11 -0.43 10.01 22.30 0.22 -0.20 16 26 C -0.15 -0.92 9.97 22.03 0.22 -0.70 16 27 C -0.09 -0.80 10.05 22.23 0.22 -0.58 16 28 C -0.12 -1.07 6.35 -20.20 -0.13 -1.20 16 29 H 0.38 -0.05 8.70 -74.06 -0.64 -0.70 16 30 H 0.10 0.51 7.96 -2.39 -0.02 0.50 16 31 H -0.30 -2.20 7.11 99.48 0.71 -1.50 16 32 H -0.26 0.14 7.00 99.48 0.70 0.84 16 33 H 0.20 -1.17 6.27 -2.91 -0.02 -1.19 16 34 H 0.16 -2.55 8.12 -2.39 -0.02 -2.57 16 35 H 0.14 -1.88 8.14 -2.39 -0.02 -1.90 16 36 H 0.42 -7.18 8.47 -92.71 -0.79 -7.97 16 37 H 0.07 -0.42 7.84 -2.39 -0.02 -0.44 16 38 H 0.06 -0.31 8.14 -2.39 -0.02 -0.33 16 39 H 0.08 -0.97 8.02 -2.39 -0.02 -0.99 16 40 H 0.12 -1.60 7.90 -2.39 -0.02 -1.62 16 41 H 0.20 -1.46 8.06 -2.91 -0.02 -1.49 16 42 H 0.17 0.22 8.06 -2.91 -0.02 0.20 16 43 H 0.23 -1.78 5.86 -2.91 -0.02 -1.79 16 44 H 0.12 -1.47 8.10 -2.39 -0.02 -1.49 16 45 H 0.07 -0.55 8.14 -2.39 -0.02 -0.57 16 46 H 0.13 -0.14 8.06 -2.91 -0.02 -0.17 16 47 H 0.15 -0.18 8.06 -2.91 -0.02 -0.20 16 48 H 0.14 0.27 8.06 -2.91 -0.02 0.25 16 49 H 0.12 0.97 8.06 -2.91 -0.02 0.95 16 Total: 0.00 -33.29 408.81 0.54 -32.75 By element: Atomic # 1 Polarization: -24.87 SS G_CDS: -0.41 Total: -25.28 kcal Atomic # 6 Polarization: -4.92 SS G_CDS: 8.29 Total: 3.38 kcal Atomic # 7 Polarization: 4.93 SS G_CDS: -7.49 Total: -2.55 kcal Atomic # 8 Polarization: -8.05 SS G_CDS: -1.97 Total: -10.02 kcal Atomic # 14 Polarization: -0.38 SS G_CDS: 2.11 Total: 1.73 kcal Total: -33.29 0.54 -32.75 kcal The number of atoms in the molecule is 49 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946168_9818708.mol2 49 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 139.295 kcal (2) G-P(sol) polarization free energy of solvation -33.287 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 106.008 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.541 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -32.746 kcal (6) G-S(sol) free energy of system = (1) + (5) 106.549 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.99 seconds