Wall clock time and date at job start Tue Mar 9 2021 13:59:21 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 C 2 2 O 1.42898 * 1 3 3 C 1.35656 * 116.99966 * 2 1 4 4 C 1.38399 * 120.12373 * 0.02562 * 3 2 1 5 5 C 1.38718 * 120.03393 * 180.02562 * 4 3 2 6 6 O 1.35719 * 119.86571 * 179.97438 * 5 4 3 7 7 C 1.42905 * 116.99732 * 0.02562 * 6 5 4 8 8 C 1.39145 * 120.27321 * 359.97438 * 5 4 3 9 9 C 1.50708 * 119.87795 * 180.02562 * 8 5 4 10 10 O 1.42897 * 109.47267 * 74.99705 * 9 8 5 11 11 Si 1.86301 * 109.46695 * 194.99876 * 9 8 5 12 12 C 1.37576 * 120.24203 * 359.74074 * 8 5 4 13 13 C 1.39822 * 119.96275 * 0.53321 * 12 8 5 14 14 C 1.47301 * 120.13800 * 179.74297 * 13 12 8 15 15 O 1.21618 * 120.00053 * 179.72589 * 14 13 12 16 16 N 1.34775 * 119.99550 * 359.72476 * 14 13 12 17 17 C 1.46505 * 119.99773 * 180.02562 * 16 14 13 18 18 C 1.52994 * 109.47324 * 180.02562 * 17 16 14 19 19 H 1.09002 * 112.85044 * 43.80181 * 18 17 16 20 20 C 1.53776 * 113.61696 * 174.99812 * 18 17 16 21 21 C 1.53782 * 87.08534 * 139.98256 * 20 18 17 22 22 H 1.09000 * 113.61557 * 219.93781 * 21 20 18 23 23 N 1.46498 * 113.61545 * 89.11204 * 21 20 18 24 24 C 1.34941 * 126.04014 * 275.00912 * 23 21 20 25 25 C 1.35325 * 107.74555 * 179.97438 * 24 23 21 26 26 C 1.39868 * 107.91737 * 0.26206 * 25 24 23 27 27 N 1.30842 * 108.20327 * 359.55203 * 26 25 24 28 28 C 1.53774 * 113.61661 * 272.49706 * 18 17 16 29 29 H 1.08996 * 109.47228 * 59.99873 * 1 2 3 30 30 H 1.09002 * 109.47335 * 180.02562 * 1 2 3 31 31 H 1.09005 * 109.46948 * 300.00025 * 1 2 3 32 32 H 1.08005 * 119.98083 * 359.97289 * 4 3 2 33 33 H 1.09000 * 109.47435 * 59.99316 * 7 6 5 34 34 H 1.09002 * 109.47012 * 179.97438 * 7 6 5 35 35 H 1.09001 * 109.46531 * 299.99831 * 7 6 5 36 36 H 1.08998 * 109.46784 * 314.99905 * 9 8 5 37 37 H 0.96700 * 114.00373 * 179.97438 * 10 9 8 38 38 H 1.48497 * 109.99917 * 299.99707 * 11 9 8 39 39 H 1.48496 * 110.00146 * 61.31864 * 11 9 8 40 40 H 1.07999 * 120.02095 * 180.27978 * 12 8 5 41 41 H 0.96991 * 120.00345 * 0.02562 * 16 14 13 42 42 H 1.08996 * 109.47514 * 59.99761 * 17 16 14 43 43 H 1.09007 * 109.46944 * 299.99934 * 17 16 14 44 44 H 1.08997 * 113.61627 * 25.42845 * 20 18 17 45 45 H 1.09004 * 113.61784 * 254.53215 * 20 18 17 46 46 H 1.07997 * 126.13283 * 359.97438 * 24 23 21 47 47 H 1.08002 * 126.03725 * 179.97438 * 25 24 23 48 48 H 1.08007 * 125.89524 * 179.73435 * 26 25 24 49 49 H 1.09006 * 113.61840 * 105.46862 * 28 18 17 50 50 H 1.09005 * 113.61538 * 334.56672 * 28 18 17 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 6 0.0000 0.0000 0.0000 2 8 1.4290 0.0000 0.0000 3 6 2.0448 1.2087 0.0000 4 6 1.2936 2.3710 0.0005 5 6 1.9253 3.6060 0.0000 6 8 1.1852 4.7437 0.0000 7 6 -0.2359 4.5931 0.0011 8 6 3.3146 3.6833 -0.0005 9 6 3.9916 5.0298 -0.0005 10 8 3.8945 5.6118 1.3009 11 14 5.7862 4.8224 -0.4559 12 6 4.0724 2.5351 0.0048 13 6 3.4461 1.2850 -0.0004 14 6 4.2538 0.0532 -0.0004 15 8 3.7065 -1.0329 0.0001 16 7 5.5994 0.1297 -0.0009 17 6 6.4028 -1.0954 -0.0015 18 6 7.8887 -0.7309 -0.0014 19 1 8.1271 0.0737 0.6942 20 6 8.8214 -1.9474 0.1209 21 6 9.7293 -1.2561 -0.9100 22 1 10.1576 -1.9400 -1.6427 23 7 10.7271 -0.3668 -0.3103 24 6 10.5338 0.9220 0.0395 25 6 11.6945 1.3877 0.5564 26 6 12.6309 0.3495 0.5155 27 7 12.0503 -0.7046 0.0019 28 6 8.4723 -0.5240 -1.4089 29 1 -0.3633 0.5138 -0.8899 30 1 -0.3634 -1.0277 0.0005 31 1 -0.3633 0.5139 0.8900 32 1 0.2149 2.3165 0.0005 33 1 -0.5425 4.0442 0.8915 34 1 -0.7055 5.5768 0.0015 35 1 -0.5436 4.0435 -0.8884 36 1 3.5053 5.6809 -0.7269 37 1 4.3103 6.4817 1.3748 38 1 6.4604 3.9366 0.5269 39 1 5.9008 4.2474 -1.8202 40 1 5.1505 2.5993 0.0090 41 1 6.0359 0.9959 -0.0010 42 1 6.1720 -1.6809 -0.8914 43 1 6.1727 -1.6812 0.8885 44 1 8.3782 -2.8755 -0.2403 45 1 9.2780 -2.0504 1.1053 46 1 9.6170 1.4817 -0.0728 47 1 11.8686 2.3861 0.9297 48 1 13.6553 0.4070 0.8528 49 1 8.6471 0.5223 -1.6597 50 1 7.9337 -1.0628 -2.1886 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_12297780.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 13:59:21 Heat of formation + Delta-G solvation = 14.681553 kcal Electronic energy + Delta-G solvation = -34515.575025 eV Core-core repulsion = 29900.049369 eV Total energy + Delta-G solvation = -4615.525656 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 374.172 amu Computer time = 1.14 seconds Orbital eigenvalues (eV) -42.44368 -42.06172 -40.64283 -40.06697 -39.49151 -38.36204 -37.04954 -35.57200 -32.63141 -32.35982 -31.75179 -30.98746 -29.13575 -28.99491 -28.04668 -27.07928 -26.07410 -25.06283 -24.12370 -22.68608 -22.32108 -21.73779 -21.33670 -20.37281 -20.03388 -18.66676 -18.43793 -18.29005 -17.94713 -17.33843 -17.11727 -16.78116 -16.63587 -16.53231 -16.38409 -16.17965 -15.79438 -15.65163 -15.53518 -15.33682 -15.24541 -14.71189 -14.51916 -14.26708 -14.20526 -13.95735 -13.93656 -13.79843 -13.59529 -13.46733 -13.41104 -13.00749 -12.88451 -12.64986 -12.57514 -12.26176 -12.19915 -11.98536 -11.85328 -11.74501 -11.68782 -11.51598 -10.76423 -10.32003 -10.29679 -10.08680 -9.94210 -9.50267 -9.16841 -5.09459 -0.24300 0.07466 0.95633 1.17168 1.46698 1.50354 1.80045 1.81648 1.97327 2.00893 2.08454 2.11851 2.64825 3.02286 3.15808 3.28944 3.39074 3.45203 3.51078 3.64516 3.71668 3.81250 3.88169 3.93328 3.96102 4.02828 4.03961 4.04240 4.10956 4.11585 4.17762 4.24203 4.36635 4.39534 4.41324 4.42694 4.50629 4.51226 4.65346 4.67645 4.74153 4.75531 4.81647 4.89835 4.90528 5.00405 5.02376 5.13063 5.24433 5.41073 5.75694 5.96544 6.09912 6.24675 6.48030 6.65342 6.81120 7.31203 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 C 0.018 3.982 2 O -0.274 6.274 3 C 0.235 3.765 4 C -0.313 4.313 5 C 0.225 3.775 6 O -0.295 6.295 7 C 0.021 3.979 8 C -0.152 4.152 9 C -0.055 4.055 10 O -0.543 6.543 11 Si 0.675 3.325 12 C -0.013 4.013 13 C -0.210 4.210 14 C 0.566 3.434 15 O -0.516 6.516 16 N -0.734 5.734 17 C 0.133 3.867 18 C -0.130 4.130 19 H 0.099 0.901 20 C -0.134 4.134 21 C 0.134 3.866 22 H 0.113 0.887 23 N -0.355 5.355 24 C 0.051 3.949 25 C -0.272 4.272 26 C 0.045 3.955 27 N -0.293 5.293 28 C -0.140 4.140 29 H 0.058 0.942 30 H 0.108 0.892 31 H 0.058 0.942 32 H 0.147 0.853 33 H 0.060 0.940 34 H 0.108 0.892 35 H 0.059 0.941 36 H 0.075 0.925 37 H 0.380 0.620 38 H -0.248 1.248 39 H -0.250 1.250 40 H 0.133 0.867 41 H 0.394 0.606 42 H 0.075 0.925 43 H 0.074 0.926 44 H 0.107 0.893 45 H 0.082 0.918 46 H 0.169 0.831 47 H 0.149 0.851 48 H 0.185 0.815 49 H 0.080 0.920 50 H 0.111 0.889 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -2.404 6.477 -1.556 7.082 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 C -0.077 4.077 2 O -0.184 6.184 3 C 0.186 3.814 4 C -0.332 4.332 5 C 0.177 3.823 6 O -0.206 6.206 7 C -0.074 4.074 8 C -0.153 4.153 9 C -0.165 4.165 10 O -0.349 6.349 11 Si 0.576 3.424 12 C -0.031 4.031 13 C -0.214 4.214 14 C 0.354 3.646 15 O -0.392 6.392 16 N -0.388 5.388 17 C 0.010 3.990 18 C -0.149 4.149 19 H 0.117 0.883 20 C -0.173 4.173 21 C 0.031 3.969 22 H 0.131 0.869 23 N -0.138 5.138 24 C -0.095 4.095 25 C -0.301 4.301 26 C -0.141 4.141 27 N -0.113 5.113 28 C -0.178 4.178 29 H 0.077 0.923 30 H 0.126 0.874 31 H 0.077 0.923 32 H 0.165 0.835 33 H 0.078 0.922 34 H 0.126 0.874 35 H 0.078 0.922 36 H 0.093 0.907 37 H 0.227 0.773 38 H -0.173 1.173 39 H -0.174 1.174 40 H 0.151 0.849 41 H 0.228 0.772 42 H 0.093 0.907 43 H 0.092 0.908 44 H 0.126 0.874 45 H 0.101 0.899 46 H 0.186 0.814 47 H 0.166 0.834 48 H 0.201 0.799 49 H 0.099 0.901 50 H 0.130 0.870 Dipole moment (debyes) X Y Z Total from point charges -2.323 3.213 -2.074 4.474 hybrid contribution -1.004 1.290 0.315 1.665 sum -3.327 4.502 -1.759 5.868 Atomic orbital electron populations 1.23256 0.78134 1.04918 1.01387 1.86398 1.21267 1.24939 1.85758 1.18688 0.90517 0.84493 0.87751 1.21299 1.01192 0.91390 1.19351 1.18666 0.90278 0.84795 0.88571 1.86137 1.19498 1.28411 1.86572 1.23229 0.77742 1.04716 1.01690 1.18401 0.90242 0.94241 1.12415 1.24412 1.10031 0.93060 0.89034 1.86522 1.82028 1.37596 1.28755 0.95099 0.77880 0.89453 0.79940 1.20717 0.98679 0.90381 0.93348 1.19008 0.90801 0.93398 1.18180 1.17770 0.81640 0.88590 0.76584 1.90852 1.71331 1.28581 1.48418 1.45882 1.06067 1.09636 1.77190 1.21339 0.87891 0.86677 1.03106 1.22976 0.94112 0.99994 0.97791 0.88291 1.23369 0.95544 0.97797 1.00604 1.22040 0.86382 0.92334 0.96098 0.86865 1.48391 1.08942 1.08610 1.47834 1.22455 1.00565 0.86404 1.00100 1.21563 0.93363 1.01976 1.13241 1.23971 1.00533 0.90743 0.98864 1.77421 0.89393 1.23675 1.20842 1.23543 0.94509 1.02180 0.97573 0.92344 0.87389 0.92326 0.83545 0.92161 0.87392 0.92245 0.90745 0.77254 1.17310 1.17446 0.84943 0.77171 0.90666 0.90770 0.87441 0.89949 0.81430 0.83352 0.79850 0.90122 0.87039 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 C 0.02 -0.01 9.81 101.05 0.99 0.98 16 2 O -0.27 -1.15 8.56 -40.59 -0.35 -1.50 16 3 C 0.24 0.87 6.70 -38.73 -0.26 0.61 16 4 C -0.31 -0.53 8.01 -39.34 -0.32 -0.84 16 5 C 0.22 0.52 6.67 -39.07 -0.26 0.26 16 6 O -0.30 -0.41 9.80 -18.86 -0.18 -0.60 16 7 C 0.02 -0.05 9.80 101.05 0.99 0.94 16 8 C -0.15 -0.34 5.30 -104.52 -0.55 -0.90 16 9 C -0.05 0.00 2.36 36.01 0.08 0.09 16 10 O -0.54 -0.16 12.86 -35.23 -0.45 -0.61 16 11 Si 0.68 -1.50 30.20 -169.99 -5.13 -6.64 16 12 C -0.01 -0.03 8.14 -39.23 -0.32 -0.35 16 13 C -0.21 -0.79 5.89 -104.83 -0.62 -1.41 16 14 C 0.57 2.56 7.76 -12.58 -0.10 2.47 16 15 O -0.52 -4.11 15.15 -16.66 -0.25 -4.36 16 16 N -0.73 -0.82 5.50 -61.42 -0.34 -1.15 16 17 C 0.13 -0.01 5.51 -4.04 -0.02 -0.03 16 18 C -0.13 0.25 3.33 -89.82 -0.30 -0.05 16 19 H 0.10 -0.19 6.98 -51.93 -0.36 -0.55 16 20 C -0.13 0.19 7.44 -25.92 -0.19 0.00 16 21 C 0.13 -0.08 5.18 -67.12 -0.35 -0.43 16 22 H 0.11 -0.09 8.14 -51.93 -0.42 -0.51 16 23 N -0.36 -0.63 3.79 -54.07 -0.21 -0.84 16 24 C 0.05 0.03 9.62 -17.22 -0.17 -0.14 16 25 C -0.27 -0.27 10.80 -40.01 -0.43 -0.70 16 26 C 0.04 0.10 12.03 -17.36 -0.21 -0.11 16 27 N -0.29 -1.19 12.58 30.63 0.39 -0.81 16 28 C -0.14 0.35 6.88 -25.92 -0.18 0.17 16 29 H 0.06 -0.12 7.66 -51.93 -0.40 -0.51 16 30 H 0.11 -0.17 8.14 -51.93 -0.42 -0.59 16 31 H 0.06 -0.10 7.66 -51.93 -0.40 -0.50 16 32 H 0.15 -0.14 4.50 -52.48 -0.24 -0.37 16 33 H 0.06 -0.17 7.65 -51.93 -0.40 -0.56 16 34 H 0.11 -0.42 8.14 -51.93 -0.42 -0.84 16 35 H 0.06 -0.19 7.65 -51.93 -0.40 -0.59 16 36 H 0.07 -0.07 7.82 -51.93 -0.41 -0.47 16 37 H 0.38 -1.79 8.74 45.56 0.40 -1.39 16 38 H -0.25 0.17 6.74 56.52 0.38 0.55 16 39 H -0.25 0.03 7.11 56.52 0.40 0.43 16 40 H 0.13 0.03 3.21 -52.49 -0.17 -0.14 16 41 H 0.39 -0.35 6.49 -40.82 -0.26 -0.61 16 42 H 0.08 0.01 7.84 -51.93 -0.41 -0.39 16 43 H 0.07 0.08 8.14 -51.93 -0.42 -0.34 16 44 H 0.11 -0.28 8.10 -51.93 -0.42 -0.70 16 45 H 0.08 0.01 8.14 -51.93 -0.42 -0.41 16 46 H 0.17 -0.40 6.67 -52.49 -0.35 -0.75 16 47 H 0.15 -0.15 8.06 -52.49 -0.42 -0.58 16 48 H 0.18 -0.12 8.06 -52.48 -0.42 -0.54 16 49 H 0.08 -0.22 6.97 -51.93 -0.36 -0.59 16 50 H 0.11 -0.37 7.90 -51.93 -0.41 -0.78 16 LS Contribution 406.14 15.07 6.12 6.12 Total: 0.00 -12.20 406.14 -9.37 -21.57 By element: Atomic # 1 Polarization: -4.99 SS G_CDS: -6.76 Total: -11.75 kcal Atomic # 6 Polarization: 2.76 SS G_CDS: -2.20 Total: 0.56 kcal Atomic # 7 Polarization: -2.64 SS G_CDS: -0.16 Total: -2.80 kcal Atomic # 8 Polarization: -5.83 SS G_CDS: -1.24 Total: -7.07 kcal Atomic # 14 Polarization: -1.50 SS G_CDS: -5.13 Total: -6.64 kcal Total LS contribution 6.12 Total: 6.12 kcal Total: -12.20 -9.37 -21.57 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_12297780.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 36.250 kcal (2) G-P(sol) polarization free energy of solvation -12.200 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 24.050 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.368 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -21.569 kcal (6) G-S(sol) free energy of system = (1) + (5) 14.682 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.14 seconds