Wall clock time and date at job start Tue Mar 9 2021 14:00:15 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42893 * 1 3 3 Si 1.86300 * 109.47145 * 2 1 4 4 C 1.50701 * 109.47153 * 119.99897 * 2 1 3 5 5 C 1.38183 * 119.84408 * 15.00291 * 4 2 1 6 6 C 1.38318 * 120.14748 * 180.02562 * 5 4 2 7 7 F 1.35097 * 120.08416 * 179.97438 * 6 5 4 8 8 C 1.39804 * 119.83034 * 359.97438 * 6 5 4 9 9 C 1.47689 * 120.15283 * 180.02562 * 8 6 5 10 10 O 1.21566 * 120.00169 * 359.97438 * 9 8 6 11 11 N 1.34779 * 120.00127 * 179.97438 * 9 8 6 12 12 C 1.46496 * 120.00458 * 179.97438 * 11 9 8 13 13 C 1.53001 * 109.47565 * 179.97438 * 12 11 9 14 14 H 1.08995 * 112.85004 * 316.20263 * 13 12 11 15 15 C 1.53787 * 113.61179 * 87.50108 * 13 12 11 16 16 C 1.53780 * 87.08015 * 139.98195 * 15 13 12 17 17 H 1.09003 * 113.69270 * 220.00786 * 16 15 13 18 18 N 1.46501 * 113.61289 * 89.11926 * 16 15 13 19 19 C 1.34951 * 126.03602 * 347.75851 * 18 16 15 20 20 C 1.35312 * 107.74772 * 180.15058 * 19 18 16 21 21 C 1.39869 * 107.91889 * 359.61173 * 20 19 18 22 22 N 1.30837 * 108.20188 * 0.23962 * 21 20 19 23 23 C 1.53779 * 87.08336 * 334.56857 * 16 15 13 24 24 C 1.39654 * 119.69106 * 0.26821 * 8 6 5 25 25 C 1.38071 * 119.85135 * 359.45372 * 24 8 6 26 26 F 1.35104 * 119.91781 * 180.24825 * 25 24 8 27 27 H 0.96706 * 114.00133 * 299.99857 * 1 2 3 28 28 H 1.09005 * 109.47071 * 239.99687 * 2 1 3 29 29 H 1.48504 * 109.99718 * 178.68145 * 3 2 1 30 30 H 1.48506 * 109.99706 * 299.99682 * 3 2 1 31 31 H 1.08000 * 119.92764 * 359.97438 * 5 4 2 32 32 H 0.97006 * 119.99857 * 359.97438 * 11 9 8 33 33 H 1.09005 * 109.47174 * 59.99548 * 12 11 9 34 34 H 1.09004 * 109.47238 * 299.99783 * 12 11 9 35 35 H 1.09010 * 113.60972 * 25.43550 * 15 13 12 36 36 H 1.08999 * 113.61770 * 254.53463 * 15 13 12 37 37 H 1.08008 * 126.12704 * 0.02562 * 19 18 16 38 38 H 1.08002 * 126.04491 * 179.88067 * 20 19 18 39 39 H 1.08000 * 125.90176 * 180.22054 * 21 20 19 40 40 H 1.08997 * 113.61713 * 139.97505 * 23 16 15 41 41 H 1.08996 * 113.61542 * 270.80307 * 23 16 15 42 42 H 1.08001 * 120.07807 * 179.72740 * 24 8 6 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4289 0.0000 0.0000 3 14 2.0499 1.7565 0.0000 4 6 1.9313 -0.7104 1.2305 5 6 1.0690 -1.4962 1.9710 6 6 1.5232 -2.1506 3.1018 7 9 0.6790 -2.9181 3.8251 8 6 2.8583 -2.0157 3.4942 9 6 3.3510 -2.7117 4.7000 10 8 2.5951 -3.4035 5.3541 11 7 4.6388 -2.5800 5.0752 12 6 5.1275 -3.2699 6.2716 13 6 6.6115 -2.9555 6.4713 14 1 7.1832 -3.0057 5.5447 15 6 6.8660 -1.6761 7.2857 16 6 8.0132 -2.4356 7.9726 17 1 8.0889 -2.2406 9.0424 18 7 9.2977 -2.3104 7.2793 19 6 9.4849 -1.8160 6.0377 20 6 10.8090 -1.8754 5.7653 21 6 11.4542 -2.4166 6.8821 22 7 10.5492 -2.6778 7.7902 23 6 7.2542 -3.7295 7.6344 24 6 3.7225 -1.2157 2.7435 25 6 3.2567 -0.5730 1.6138 26 9 4.0929 0.1973 0.8838 27 1 -0.3934 0.4417 0.7651 28 1 1.7923 -0.5139 -0.8900 29 1 3.5346 1.7702 0.0321 30 1 1.5614 2.4678 -1.2086 31 1 0.0379 -1.5990 1.6667 32 1 5.2421 -2.0283 4.5530 33 1 4.9975 -4.3452 6.1495 34 1 4.5640 -2.9322 7.1414 35 1 6.0487 -1.4174 7.9591 36 1 7.2006 -0.8330 6.6813 37 1 8.7154 -1.4419 5.3785 38 1 11.2843 -1.5567 4.8494 39 1 12.5159 -2.5895 6.9781 40 1 7.9022 -4.5442 7.3114 41 1 6.5441 -4.0330 8.4037 42 1 4.7539 -1.1036 3.0435 There are 63 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 63 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_12360598.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:00:15 Heat of formation + Delta-G solvation = 1.714701 kcal Electronic energy + Delta-G solvation = -30017.900179 eV Core-core repulsion = 25411.343909 eV Total energy + Delta-G solvation = -4606.556270 eV No. of doubly occupied orbitals = 63 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 350.123 amu Computer time = 0.82 seconds Orbital eigenvalues (eV) -50.52385 -50.00282 -42.50396 -41.36630 -40.28259 -39.65660 -37.80251 -35.88771 -33.41443 -32.35081 -31.52372 -31.05334 -29.32687 -27.71949 -27.15291 -24.93790 -24.32942 -23.55848 -22.43992 -21.92190 -21.75102 -20.50768 -19.71935 -19.17338 -18.62824 -18.10447 -17.93768 -17.56766 -17.33267 -17.01674 -16.81665 -16.53998 -16.23004 -16.10226 -15.86982 -15.80473 -15.69454 -15.58833 -15.20097 -14.85562 -14.61910 -14.40233 -14.18800 -14.02078 -13.77588 -13.74797 -13.47743 -13.32298 -13.15595 -13.01276 -12.61758 -12.34976 -11.96080 -11.83189 -11.60666 -11.54549 -11.11836 -11.08602 -10.39455 -10.37505 -10.28542 -9.78692 -9.55873 -5.15783 -0.84962 -0.39323 0.90150 1.01235 1.40978 1.43361 1.53416 1.76496 1.88766 1.92082 2.24826 2.69374 2.73618 2.93656 2.98203 3.04792 3.06907 3.29634 3.32229 3.41295 3.46784 3.69048 3.75039 3.86403 3.95380 4.02253 4.16252 4.21040 4.26672 4.27795 4.34874 4.44232 4.49939 4.55318 4.60122 4.63220 4.65792 4.68261 4.74129 4.83854 4.91072 5.07527 5.15092 5.32260 5.70196 6.04498 6.16837 6.23879 6.75767 6.94320 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.534 6.534 2 C -0.072 4.072 3 Si 0.688 3.312 4 C -0.090 4.090 5 C -0.125 4.125 6 C 0.162 3.838 7 F -0.105 7.105 8 C -0.151 4.151 9 C 0.560 3.440 10 O -0.513 6.513 11 N -0.724 5.724 12 C 0.131 3.869 13 C -0.129 4.129 14 H 0.100 0.900 15 C -0.139 4.139 16 C 0.134 3.866 17 H 0.113 0.887 18 N -0.356 5.356 19 C 0.051 3.949 20 C -0.272 4.272 21 C 0.045 3.955 22 N -0.293 5.293 23 C -0.135 4.135 24 C -0.085 4.085 25 C 0.075 3.925 26 F -0.118 7.118 27 H 0.383 0.617 28 H 0.130 0.870 29 H -0.226 1.226 30 H -0.256 1.256 31 H 0.164 0.836 32 H 0.400 0.600 33 H 0.076 0.924 34 H 0.078 0.922 35 H 0.111 0.889 36 H 0.082 0.918 37 H 0.170 0.830 38 H 0.148 0.852 39 H 0.184 0.816 40 H 0.082 0.918 41 H 0.107 0.893 42 H 0.150 0.850 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 0.638 4.178 -0.587 4.267 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.340 6.340 2 C -0.181 4.181 3 Si 0.586 3.414 4 C -0.092 4.092 5 C -0.144 4.144 6 C 0.141 3.859 7 F -0.083 7.083 8 C -0.155 4.155 9 C 0.346 3.654 10 O -0.389 6.389 11 N -0.377 5.377 12 C 0.008 3.992 13 C -0.148 4.148 14 H 0.118 0.882 15 C -0.177 4.177 16 C 0.031 3.969 17 H 0.131 0.869 18 N -0.138 5.138 19 C -0.095 4.095 20 C -0.302 4.302 21 C -0.141 4.141 22 N -0.113 5.113 23 C -0.174 4.174 24 C -0.105 4.105 25 C 0.055 3.945 26 F -0.096 7.096 27 H 0.231 0.769 28 H 0.147 0.853 29 H -0.149 1.149 30 H -0.181 1.181 31 H 0.181 0.819 32 H 0.235 0.765 33 H 0.094 0.906 34 H 0.096 0.904 35 H 0.130 0.870 36 H 0.100 0.900 37 H 0.187 0.813 38 H 0.166 0.834 39 H 0.201 0.799 40 H 0.101 0.899 41 H 0.126 0.874 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 0.323 3.463 0.188 3.483 hybrid contribution 0.618 -0.119 -1.382 1.519 sum 0.941 3.343 -1.195 3.673 Atomic orbital electron populations 1.86535 1.16425 1.81398 1.49611 1.25161 0.85816 1.10714 0.96442 0.95159 0.81907 0.75750 0.88573 1.20458 0.92179 0.98099 0.98464 1.20862 1.02512 0.97303 0.93678 1.17629 0.86624 0.91221 0.90390 1.91655 1.69149 1.71693 1.75800 1.19837 0.93468 1.03347 0.98890 1.17828 0.82300 0.81269 0.84025 1.90902 1.55387 1.38614 1.54004 1.45838 1.10619 1.51710 1.29514 1.21419 0.92538 0.97871 0.87401 1.22971 0.95513 0.97079 0.99193 0.88153 1.23542 0.97415 0.97186 0.99571 1.22037 0.78965 0.98223 0.97682 0.86882 1.48393 1.05696 1.48065 1.11682 1.22453 0.98452 1.00303 0.88307 1.21567 0.92996 1.13402 1.02217 1.23976 0.99743 0.98555 0.91828 1.77426 0.88227 1.22807 1.22857 1.23374 0.99081 0.96875 0.98069 1.21085 1.00500 0.95534 0.93336 1.17216 0.87993 0.96466 0.92805 1.91605 1.70821 1.71582 1.75617 0.76919 0.85271 1.14925 1.18090 0.81886 0.76492 0.90564 0.90391 0.87038 0.89955 0.81282 0.83405 0.79866 0.89943 0.87420 0.83236 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 1.09 11.63 -35.23 -0.41 0.68 16 2 C -0.07 0.15 2.96 36.01 0.11 0.26 16 3 Si 0.69 -1.61 30.81 -169.99 -5.24 -6.84 16 4 C -0.09 0.18 5.14 -104.48 -0.54 -0.36 16 5 C -0.12 0.19 9.20 -39.57 -0.36 -0.17 16 6 C 0.16 0.09 7.28 -38.97 -0.28 -0.19 16 7 F -0.11 -0.35 15.55 2.25 0.04 -0.31 16 8 C -0.15 0.06 5.88 -104.92 -0.62 -0.56 16 9 C 0.56 0.56 7.77 -12.40 -0.10 0.47 16 10 O -0.51 -2.71 15.34 5.31 0.08 -2.63 16 11 N -0.72 1.80 5.51 -61.30 -0.34 1.47 16 12 C 0.13 -0.35 5.51 -4.04 -0.02 -0.37 16 13 C -0.13 0.54 3.34 -89.80 -0.30 0.24 16 14 H 0.10 -0.43 7.00 -51.93 -0.36 -0.80 16 15 C -0.14 0.62 6.88 -25.92 -0.18 0.44 16 16 C 0.13 -0.27 5.18 -67.12 -0.35 -0.62 16 17 H 0.11 -0.21 8.14 -51.93 -0.42 -0.64 16 18 N -0.36 -0.22 3.79 -54.07 -0.21 -0.42 16 19 C 0.05 -0.04 9.62 -17.22 -0.17 -0.20 16 20 C -0.27 -0.04 10.80 -40.01 -0.43 -0.47 16 21 C 0.05 0.07 12.03 -17.36 -0.21 -0.14 16 22 N -0.29 -0.96 12.58 30.62 0.39 -0.57 16 23 C -0.14 0.40 7.44 -25.92 -0.19 0.20 16 24 C -0.09 0.23 9.51 -39.11 -0.37 -0.14 16 25 C 0.07 -0.13 6.65 -39.49 -0.26 -0.40 16 26 F -0.12 0.09 12.80 2.25 0.03 0.12 16 27 H 0.38 -2.33 8.42 45.56 0.38 -1.95 16 28 H 0.13 -0.23 7.96 -51.93 -0.41 -0.64 16 29 H -0.23 0.05 5.26 56.52 0.30 0.35 16 30 H -0.26 -0.28 7.11 56.52 0.40 0.12 16 31 H 0.16 -0.45 7.06 -52.49 -0.37 -0.82 16 32 H 0.40 -2.12 6.51 -40.82 -0.27 -2.39 16 33 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 34 H 0.08 -0.17 7.84 -51.93 -0.41 -0.58 16 35 H 0.11 -0.58 7.90 -51.92 -0.41 -0.99 16 36 H 0.08 -0.40 6.96 -51.93 -0.36 -0.76 16 37 H 0.17 -0.71 6.67 -52.48 -0.35 -1.06 16 38 H 0.15 -0.25 8.06 -52.49 -0.42 -0.67 16 39 H 0.18 -0.21 8.06 -52.49 -0.42 -0.64 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.11 -0.43 8.10 -51.93 -0.42 -0.85 16 42 H 0.15 -0.84 6.41 -52.49 -0.34 -1.18 16 LS Contribution 356.93 15.07 5.38 5.38 Total: 0.00 -10.40 356.93 -9.28 -19.69 By element: Atomic # 1 Polarization: -9.80 SS G_CDS: -4.73 Total: -14.53 kcal Atomic # 6 Polarization: 2.25 SS G_CDS: -4.27 Total: -2.02 kcal Atomic # 7 Polarization: 0.63 SS G_CDS: -0.16 Total: 0.47 kcal Atomic # 8 Polarization: -1.62 SS G_CDS: -0.33 Total: -1.95 kcal Atomic # 9 Polarization: -0.26 SS G_CDS: 0.06 Total: -0.19 kcal Atomic # 14 Polarization: -1.61 SS G_CDS: -5.24 Total: -6.84 kcal Total LS contribution 5.38 Total: 5.38 kcal Total: -10.40 -9.28 -19.69 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_12360598.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 21.401 kcal (2) G-P(sol) polarization free energy of solvation -10.403 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 10.998 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.284 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.687 kcal (6) G-S(sol) free energy of system = (1) + (5) 1.715 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.82 seconds