Wall clock time and date at job start Tue Mar 9 2021 14:00:22 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86306 * 109.46880 * 2 1 4 4 C 1.50698 * 109.47448 * 240.00230 * 2 1 3 5 5 C 1.38628 * 119.94423 * 74.99459 * 4 2 1 6 6 F 1.35102 * 119.88109 * 0.02562 * 5 4 2 7 7 C 1.38676 * 120.23979 * 180.02562 * 5 4 2 8 8 C 1.37816 * 120.12051 * 359.97438 * 7 5 4 9 9 C 1.39667 * 119.87523 * 359.97438 * 8 7 5 10 10 C 1.47726 * 120.11578 * 179.97438 * 9 8 7 11 11 O 1.21570 * 120.00376 * 180.02562 * 10 9 8 12 12 N 1.34777 * 119.99651 * 359.97438 * 10 9 8 13 13 C 1.46508 * 120.00013 * 180.02562 * 12 10 9 14 14 C 1.52991 * 109.47429 * 180.02562 * 13 12 10 15 15 H 1.08999 * 112.90686 * 316.25260 * 14 13 12 16 16 C 1.53781 * 113.61611 * 87.50116 * 14 13 12 17 17 C 1.54049 * 87.08031 * 139.97702 * 16 14 13 18 18 H 1.08992 * 113.69868 * 220.05225 * 17 16 14 19 19 N 1.46506 * 113.61276 * 89.07129 * 17 16 14 20 20 C 1.34953 * 126.03318 * 347.34077 * 19 17 16 21 21 C 1.35322 * 107.74244 * 179.83842 * 20 19 17 22 22 C 1.39877 * 107.91753 * 0.41906 * 21 20 19 23 23 N 1.30836 * 108.20265 * 359.74274 * 22 21 20 24 24 C 1.53781 * 113.61529 * 184.99923 * 14 13 12 25 25 C 1.37862 * 119.93577 * 255.23245 * 4 2 1 26 26 H 0.96699 * 114.00282 * 60.00713 * 1 2 3 27 27 H 1.08996 * 109.47237 * 119.99470 * 2 1 3 28 28 H 1.48504 * 109.99648 * 298.68043 * 3 2 1 29 29 H 1.48504 * 109.99707 * 59.99586 * 3 2 1 30 30 H 1.08001 * 119.94040 * 180.02562 * 7 5 4 31 31 H 1.07999 * 120.05946 * 179.97438 * 8 7 5 32 32 H 0.96996 * 120.00851 * 359.97438 * 12 10 9 33 33 H 1.08997 * 109.46666 * 59.99730 * 13 12 10 34 34 H 1.09002 * 109.46731 * 300.00370 * 13 12 10 35 35 H 1.09005 * 113.61471 * 254.53285 * 16 14 13 36 36 H 1.09003 * 113.61469 * 25.43063 * 16 14 13 37 37 H 1.07996 * 126.12958 * 359.97438 * 20 19 17 38 38 H 1.07998 * 126.04014 * 180.16199 * 21 20 19 39 39 H 1.07997 * 125.89714 * 179.71928 * 22 21 20 40 40 H 1.09002 * 113.61445 * 334.56787 * 24 14 13 41 41 H 1.09002 * 113.61408 * 105.38518 * 24 14 13 42 42 H 1.07996 * 120.06183 * 359.97438 * 25 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7103 -1.2305 5 6 1.8689 -0.0835 -2.4653 6 9 1.3579 1.1634 -2.5621 7 6 2.3290 -0.7317 -3.6017 8 6 2.8517 -2.0035 -3.5086 9 6 2.9180 -2.6392 -2.2668 10 6 3.4768 -4.0026 -2.1610 11 8 3.5331 -4.5542 -1.0791 12 7 3.9232 -4.6354 -3.2641 13 6 4.4769 -5.9877 -3.1593 14 6 4.9071 -6.4715 -4.5454 15 1 4.1753 -6.2436 -5.3204 16 6 6.3444 -6.0718 -4.9188 17 6 6.4885 -7.4734 -5.5416 18 1 7.4576 -7.9369 -5.3578 19 7 6.0848 -7.5346 -6.9486 20 6 5.4055 -6.5824 -7.6218 21 6 5.2338 -7.0180 -8.8914 22 6 5.8202 -8.2837 -8.9952 23 7 6.3306 -8.5943 -7.8312 24 6 5.3916 -7.9309 -4.5657 25 6 2.4479 -1.9843 -1.1267 26 1 -0.3934 0.4416 -0.7651 27 1 1.7924 -0.5137 0.8900 28 1 1.5878 2.4585 -1.2243 29 1 1.5613 2.4679 1.2085 30 1 2.2783 -0.2386 -4.5613 31 1 3.2094 -2.5075 -4.3943 32 1 3.8773 -4.1958 -4.1275 33 1 3.7188 -6.6605 -2.7583 34 1 5.3407 -5.9762 -2.4945 35 1 6.3974 -5.2626 -5.6472 36 1 6.9904 -5.9089 -4.0560 37 1 5.0624 -5.6406 -7.2199 38 1 4.7293 -6.4846 -9.6834 39 1 5.8468 -8.8984 -9.8827 40 1 5.7770 -8.2763 -3.6064 41 1 4.6747 -8.6228 -5.0077 42 1 2.4930 -2.4731 -0.1647 There are 60 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 60 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) F: (AM1): M.J.S. DEWAR AND E. G. ZOEBISCH, THEOCHEM, 180, 1 (1988). Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_12496548.mol2 42 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:00:22 Heat of formation + Delta-G solvation = 41.662012 kcal Electronic energy + Delta-G solvation = -27290.116703 eV Core-core repulsion = 23154.746654 eV Total energy + Delta-G solvation = -4135.370049 eV No. of doubly occupied orbitals = 60 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 332.132 amu Computer time = 0.78 seconds Orbital eigenvalues (eV) -50.52190 -42.49845 -41.45324 -40.21033 -39.45991 -37.80578 -35.87687 -33.21009 -32.55299 -31.96856 -31.04944 -29.00322 -27.15321 -27.05912 -25.41477 -24.09881 -23.62493 -22.43278 -21.82457 -21.48312 -20.45065 -19.38618 -18.93964 -18.26046 -17.99820 -17.89415 -17.26364 -16.98399 -16.72045 -16.48767 -16.12887 -15.81891 -15.63738 -15.62244 -15.24518 -15.15827 -14.91955 -14.67512 -14.52428 -14.14049 -14.02480 -13.81116 -13.73609 -13.47984 -13.41803 -13.12816 -12.97462 -12.41618 -12.33447 -11.94780 -11.82565 -11.58091 -11.29792 -11.15739 -10.87309 -10.37709 -10.33606 -10.23899 -9.92418 -9.56023 -4.97824 -0.61826 -0.12435 0.89978 1.17887 1.40937 1.52216 1.60771 1.87264 1.91823 1.98931 2.47185 2.85150 2.93847 3.06710 3.15003 3.30682 3.35848 3.41381 3.42699 3.49023 3.74292 3.75308 3.86592 3.95479 3.98847 4.14879 4.24316 4.27521 4.35230 4.44464 4.46922 4.55280 4.59089 4.63658 4.67198 4.71976 4.74266 4.83713 4.86654 4.91767 4.96618 5.07234 5.19343 5.45182 5.69988 6.04414 6.24774 6.25138 6.75631 7.01495 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.523 6.523 2 C -0.074 4.074 3 Si 0.675 3.325 4 C -0.151 4.151 5 C 0.119 3.881 6 F -0.122 7.122 7 C -0.152 4.152 8 C -0.055 4.055 9 C -0.144 4.144 10 C 0.561 3.439 11 O -0.529 6.529 12 N -0.726 5.726 13 C 0.130 3.870 14 C -0.129 4.129 15 H 0.100 0.900 16 C -0.138 4.138 17 C 0.133 3.867 18 H 0.113 0.887 19 N -0.356 5.356 20 C 0.051 3.949 21 C -0.273 4.273 22 C 0.045 3.955 23 N -0.293 5.293 24 C -0.136 4.136 25 C -0.009 4.009 26 H 0.375 0.625 27 H 0.125 0.875 28 H -0.231 1.231 29 H -0.259 1.259 30 H 0.147 0.853 31 H 0.137 0.863 32 H 0.400 0.600 33 H 0.075 0.925 34 H 0.077 0.923 35 H 0.082 0.918 36 H 0.111 0.889 37 H 0.170 0.830 38 H 0.148 0.852 39 H 0.184 0.816 40 H 0.107 0.893 41 H 0.082 0.918 42 H 0.151 0.849 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.509 1.946 -3.574 4.781 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.329 6.329 2 C -0.183 4.183 3 Si 0.574 3.426 4 C -0.152 4.152 5 C 0.100 3.900 6 F -0.101 7.101 7 C -0.171 4.171 8 C -0.074 4.074 9 C -0.147 4.147 10 C 0.348 3.652 11 O -0.405 6.405 12 N -0.378 5.378 13 C 0.007 3.993 14 C -0.147 4.147 15 H 0.118 0.882 16 C -0.177 4.177 17 C 0.030 3.970 18 H 0.131 0.869 19 N -0.138 5.138 20 C -0.095 4.095 21 C -0.302 4.302 22 C -0.141 4.141 23 N -0.113 5.113 24 C -0.174 4.174 25 C -0.028 4.028 26 H 0.223 0.777 27 H 0.143 0.857 28 H -0.154 1.154 29 H -0.184 1.184 30 H 0.165 0.835 31 H 0.155 0.845 32 H 0.235 0.765 33 H 0.093 0.907 34 H 0.095 0.905 35 H 0.100 0.900 36 H 0.129 0.871 37 H 0.187 0.813 38 H 0.166 0.834 39 H 0.201 0.799 40 H 0.125 0.875 41 H 0.100 0.900 42 H 0.168 0.832 Dipole moment (debyes) X Y Z Total from point charges 3.097 1.223 -1.433 3.625 hybrid contribution -1.706 0.823 -1.638 2.505 sum 1.390 2.046 -3.071 3.944 Atomic orbital electron populations 1.86661 1.17088 1.79909 1.49276 1.24998 0.84297 1.11482 0.97546 0.95463 0.91425 0.74647 0.81027 1.20277 1.04093 0.96372 0.94487 1.17912 0.97221 0.80491 0.94394 1.91582 1.84441 1.37652 1.96416 1.21100 1.01786 0.95957 0.98257 1.21160 0.95706 0.93811 0.96737 1.19988 1.04936 0.95324 0.94477 1.18106 0.77697 0.85252 0.84135 1.90834 1.55400 1.67149 1.27160 1.45869 1.64028 1.17645 1.10283 1.21398 0.99309 0.82438 0.96138 1.22960 0.97023 0.97303 0.97442 0.88188 1.23582 0.96930 0.95501 1.01639 1.22091 0.99585 0.99034 0.76245 0.86864 1.48393 1.43128 1.13409 1.08884 1.22454 0.97907 0.95857 0.93283 1.21570 1.12378 0.98707 0.97546 1.23977 0.97337 0.96430 0.96365 1.77427 1.23915 1.09433 1.00551 1.23378 0.98086 0.95918 1.00066 1.21051 0.91307 0.91296 0.99157 0.77692 0.85739 1.15434 1.18434 0.83534 0.84482 0.76491 0.90668 0.90494 0.89980 0.87070 0.81273 0.83407 0.79873 0.87452 0.89977 0.83166 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.52 -0.83 12.88 -35.23 -0.45 -1.29 16 2 C -0.07 0.01 2.80 36.00 0.10 0.11 16 3 Si 0.68 -0.37 30.81 -169.99 -5.24 -5.61 16 4 C -0.15 0.07 4.78 -104.62 -0.50 -0.43 16 5 C 0.12 -0.09 6.63 -39.28 -0.26 -0.35 16 6 F -0.12 -0.04 12.57 2.25 0.03 -0.01 16 7 C -0.15 0.39 10.01 -39.57 -0.40 -0.01 16 8 C -0.06 0.18 9.54 -39.20 -0.37 -0.19 16 9 C -0.14 0.13 5.87 -104.97 -0.62 -0.48 16 10 C 0.56 0.20 7.77 -12.38 -0.10 0.10 16 11 O -0.53 -2.31 16.34 5.30 0.09 -2.23 16 12 N -0.73 2.09 5.51 -61.29 -0.34 1.75 16 13 C 0.13 -0.38 5.51 -4.04 -0.02 -0.40 16 14 C -0.13 0.57 3.33 -89.81 -0.30 0.27 16 15 H 0.10 -0.46 6.96 -51.93 -0.36 -0.82 16 16 C -0.14 0.65 6.88 -25.78 -0.18 0.47 16 17 C 0.13 -0.29 5.20 -66.97 -0.35 -0.64 16 18 H 0.11 -0.23 8.14 -51.93 -0.42 -0.65 16 19 N -0.36 -0.16 3.79 -53.93 -0.20 -0.36 16 20 C 0.05 -0.05 9.62 -17.22 -0.17 -0.22 16 21 C -0.27 0.02 10.80 -40.01 -0.43 -0.41 16 22 C 0.05 0.06 12.03 -17.36 -0.21 -0.15 16 23 N -0.29 -0.92 12.58 30.63 0.39 -0.53 16 24 C -0.14 0.42 7.43 -25.92 -0.19 0.23 16 25 C -0.01 0.00 9.21 -39.20 -0.36 -0.36 16 26 H 0.38 -0.35 8.41 45.56 0.38 0.04 16 27 H 0.12 -0.15 7.77 -51.93 -0.40 -0.55 16 28 H -0.23 -0.29 5.27 56.52 0.30 0.01 16 29 H -0.26 -0.72 7.11 56.52 0.40 -0.32 16 30 H 0.15 -0.65 8.06 -52.49 -0.42 -1.07 16 31 H 0.14 -0.90 6.40 -52.49 -0.34 -1.23 16 32 H 0.40 -2.27 6.50 -40.82 -0.27 -2.53 16 33 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 34 H 0.08 -0.19 7.84 -51.93 -0.41 -0.59 16 35 H 0.08 -0.42 6.99 -51.93 -0.36 -0.78 16 36 H 0.11 -0.59 7.90 -51.93 -0.41 -1.00 16 37 H 0.17 -0.76 6.65 -52.49 -0.35 -1.11 16 38 H 0.15 -0.29 8.06 -52.49 -0.42 -0.71 16 39 H 0.18 -0.24 8.06 -52.49 -0.42 -0.66 16 40 H 0.11 -0.45 8.10 -51.93 -0.42 -0.87 16 41 H 0.08 -0.11 8.14 -51.93 -0.42 -0.53 16 42 H 0.15 0.01 7.59 -52.49 -0.40 -0.39 16 LS Contribution 353.97 15.07 5.33 5.33 Total: 0.00 -9.81 353.97 -9.92 -19.72 By element: Atomic # 1 Polarization: -9.14 SS G_CDS: -5.17 Total: -14.31 kcal Atomic # 6 Polarization: 1.88 SS G_CDS: -4.35 Total: -2.47 kcal Atomic # 7 Polarization: 1.02 SS G_CDS: -0.16 Total: 0.86 kcal Atomic # 8 Polarization: -3.15 SS G_CDS: -0.37 Total: -3.52 kcal Atomic # 9 Polarization: -0.04 SS G_CDS: 0.03 Total: -0.01 kcal Atomic # 14 Polarization: -0.37 SS G_CDS: -5.24 Total: -5.61 kcal Total LS contribution 5.33 Total: 5.33 kcal Total: -9.81 -9.92 -19.72 kcal The number of atoms in the molecule is 42 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_12496548.mol2 42 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 61.386 kcal (2) G-P(sol) polarization free energy of solvation -9.807 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 51.579 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -9.917 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -19.724 kcal (6) G-S(sol) free energy of system = (1) + (5) 41.662 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 0.79 seconds