Wall clock time and date at job start Tue Mar 9 2021 14:00:36 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42898 * 1 3 3 Si 1.86301 * 109.47206 * 2 1 4 4 C 1.50704 * 109.47221 * 119.99823 * 2 1 3 5 5 C 1.34833 * 125.65107 * 65.29854 * 4 2 1 6 6 C 1.40795 * 107.04981 * 180.15919 * 5 4 2 7 7 C 1.36109 * 106.73337 * 359.56997 * 6 5 4 8 8 C 1.47570 * 125.94725 * 180.28484 * 7 6 5 9 9 C 1.39567 * 119.95499 * 179.97438 * 8 7 6 10 10 C 1.38313 * 119.80769 * 179.97438 * 9 8 7 11 11 O 1.35679 * 120.13152 * 179.97438 * 10 9 8 12 12 C 1.40368 * 119.73098 * 359.97438 * 10 9 8 13 13 C 1.47294 * 120.04670 * 179.97438 * 12 10 9 14 14 O 1.21620 * 120.00126 * 359.97438 * 13 12 10 15 15 N 1.34781 * 119.99920 * 180.02562 * 13 12 10 16 16 C 1.46500 * 120.00065 * 180.02562 * 15 13 12 17 17 C 1.52992 * 109.46878 * 179.97438 * 16 15 13 18 18 H 1.09005 * 112.85349 * 43.80645 * 17 16 15 19 19 C 1.53782 * 113.61195 * 174.99772 * 17 16 15 20 20 C 1.53783 * 87.08230 * 139.98354 * 19 17 16 21 21 H 1.08995 * 113.61488 * 219.93592 * 20 19 17 22 22 N 1.46497 * 113.61643 * 89.11728 * 20 19 17 23 23 C 1.34948 * 126.03454 * 274.72197 * 22 20 19 24 24 C 1.35319 * 107.74602 * 179.83716 * 23 22 20 25 25 C 1.39870 * 107.91702 * 0.41894 * 24 23 22 26 26 N 1.30841 * 108.20638 * 359.73876 * 25 24 23 27 27 C 1.53774 * 113.61767 * 272.49442 * 17 16 15 28 28 C 1.39916 * 119.90614 * 0.02562 * 12 10 9 29 29 C 1.36391 * 120.18336 * 359.73581 * 28 12 10 30 30 O 1.34226 * 125.65161 * 244.97880 * 4 2 1 31 31 H 0.96697 * 113.99755 * 300.00378 * 1 2 3 32 32 H 1.08999 * 109.47490 * 239.99782 * 2 1 3 33 33 H 1.48500 * 110.00201 * 178.67987 * 3 2 1 34 34 H 1.48500 * 110.00036 * 299.99940 * 3 2 1 35 35 H 1.08005 * 126.47499 * 0.02562 * 5 4 2 36 36 H 1.08002 * 126.63743 * 179.83926 * 6 5 4 37 37 H 1.07993 * 120.09150 * 359.95971 * 9 8 7 38 38 H 0.96707 * 113.99842 * 89.99895 * 11 10 9 39 39 H 0.97004 * 119.99575 * 359.97438 * 15 13 12 40 40 H 1.09001 * 109.46956 * 299.99924 * 16 15 13 41 41 H 1.08997 * 109.47330 * 59.99548 * 16 15 13 42 42 H 1.09001 * 113.61507 * 254.53198 * 19 17 16 43 43 H 1.09004 * 113.61529 * 25.43268 * 19 17 16 44 44 H 1.07995 * 126.12906 * 359.97438 * 23 22 20 45 45 H 1.07995 * 126.04763 * 180.15970 * 24 23 22 46 46 H 1.08006 * 125.89758 * 179.75450 * 25 24 23 47 47 H 1.08999 * 113.61473 * 334.57150 * 27 17 16 48 48 H 1.09004 * 113.61656 * 105.47148 * 27 17 16 49 49 H 1.07994 * 119.90697 * 180.02562 * 28 12 10 50 50 H 1.08004 * 119.85790 * 180.25945 * 29 28 12 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7565 0.0000 4 6 1.9314 -0.7104 1.2305 5 6 1.7617 -2.0192 1.5067 6 6 2.3802 -2.2627 2.7478 7 6 2.9080 -1.0784 3.1618 8 6 3.6578 -0.8542 4.4129 9 6 4.1460 0.4180 4.7144 10 6 4.8478 0.6248 5.8881 11 8 5.3258 1.8588 6.1874 12 6 5.0636 -0.4471 6.7682 13 6 5.8106 -0.2349 8.0198 14 8 6.2414 0.8696 8.2911 15 7 6.0177 -1.2650 8.8640 16 6 6.7602 -1.0538 10.1091 17 6 6.8519 -2.3732 10.8782 18 1 7.0969 -3.2204 10.2376 19 6 7.7186 -2.2884 12.1456 20 6 6.6657 -3.1760 12.8301 21 1 6.4511 -2.8850 13.8583 22 7 6.9252 -4.6107 12.6873 23 6 6.5558 -5.3844 11.6452 24 6 6.9850 -6.6435 11.8937 25 6 7.6307 -6.6409 13.1345 26 7 7.5955 -5.4229 13.6111 27 6 5.6547 -2.6282 11.8089 28 6 4.5690 -1.7178 6.4544 29 6 3.8732 -1.9165 5.2983 30 8 2.6271 -0.1463 2.2303 31 1 -0.3933 0.4417 0.7650 32 1 1.7924 -0.5139 -0.8899 33 1 3.5346 1.7703 0.0321 34 1 1.5615 2.4679 -1.2085 35 1 1.2465 -2.7433 0.8929 36 1 2.4304 -3.2076 3.2685 37 1 3.9763 1.2385 4.0330 38 1 4.7097 2.4076 6.6919 39 1 5.6744 -2.1460 8.6474 40 1 7.7639 -0.6972 9.8775 41 1 6.2433 -0.3131 10.7192 42 1 8.6923 -2.7671 12.0416 43 1 7.7823 -1.2841 12.5647 44 1 6.0164 -5.0570 10.7688 45 1 6.8491 -7.4999 11.2500 46 1 8.0809 -7.4965 13.6159 47 1 5.1540 -1.7169 12.1360 48 1 4.9621 -3.3813 11.4331 49 1 4.7347 -2.5425 7.1318 50 1 3.4901 -2.8986 5.0634 There are 72 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 72 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_12807986.mol2 50 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:00:36 Heat of formation + Delta-G solvation = 57.869386 kcal Electronic energy + Delta-G solvation = -35115.306911 eV Core-core repulsion = 30272.513218 eV Total energy + Delta-G solvation = -4842.793694 eV No. of doubly occupied orbitals = 72 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 396.156 amu Computer time = 1.31 seconds Orbital eigenvalues (eV) -43.78849 -42.48485 -41.56603 -40.26795 -39.36950 -38.15414 -37.86445 -35.68282 -34.30656 -33.60609 -32.39067 -31.38738 -31.04605 -30.64092 -28.92513 -27.14992 -26.96409 -24.99515 -24.22763 -24.02652 -22.49795 -22.37845 -21.96576 -21.74717 -21.35236 -20.44993 -19.79484 -18.89638 -18.56763 -18.03190 -17.76189 -17.53878 -17.38360 -16.78460 -16.53889 -16.52842 -16.31778 -15.89628 -15.83614 -15.80042 -15.56804 -15.34402 -14.96207 -14.69072 -14.55045 -14.35849 -14.24201 -14.07317 -13.99253 -13.92273 -13.74355 -13.65545 -13.53432 -13.45648 -13.05699 -12.90718 -12.80918 -12.31195 -12.14904 -11.92887 -11.87389 -11.79385 -11.55734 -11.18291 -10.83791 -10.78413 -10.64047 -10.35989 -10.18700 -10.02237 -9.54423 -9.07216 -5.10748 -0.84440 0.04798 0.60580 0.91633 1.07145 1.35456 1.41222 1.42557 1.71184 1.87546 1.92911 1.93311 1.97046 2.58271 2.94847 2.97438 3.09924 3.17163 3.29709 3.34913 3.41851 3.49220 3.60103 3.76634 3.79606 3.84163 3.88878 3.90722 3.98496 4.09327 4.19467 4.21978 4.30214 4.31750 4.37330 4.46189 4.50142 4.59245 4.60705 4.62225 4.69161 4.72383 4.76326 4.79288 4.85596 4.93197 4.95090 5.02528 5.08768 5.11315 5.28440 5.32716 5.40060 5.71495 5.90923 6.06039 6.31814 6.34679 6.63812 6.77137 7.14402 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.530 6.530 2 C -0.028 4.028 3 Si 0.700 3.300 4 C -0.045 4.045 5 C -0.174 4.174 6 C -0.177 4.177 7 C 0.022 3.978 8 C 0.031 3.969 9 C -0.141 4.141 10 C 0.179 3.821 11 O -0.474 6.474 12 C -0.166 4.166 13 C 0.558 3.442 14 O -0.517 6.517 15 N -0.729 5.729 16 C 0.132 3.868 17 C -0.128 4.128 18 H 0.100 0.900 19 C -0.136 4.136 20 C 0.133 3.867 21 H 0.113 0.887 22 N -0.356 5.356 23 C 0.051 3.949 24 C -0.273 4.273 25 C 0.045 3.955 26 N -0.293 5.293 27 C -0.138 4.138 28 C -0.064 4.064 29 C -0.116 4.116 30 O -0.161 6.161 31 H 0.384 0.616 32 H 0.134 0.866 33 H -0.252 1.252 34 H -0.245 1.245 35 H 0.155 0.845 36 H 0.156 0.844 37 H 0.145 0.855 38 H 0.399 0.601 39 H 0.398 0.602 40 H 0.074 0.926 41 H 0.075 0.925 42 H 0.082 0.918 43 H 0.107 0.893 44 H 0.170 0.830 45 H 0.148 0.852 46 H 0.184 0.816 47 H 0.111 0.889 48 H 0.081 0.919 49 H 0.135 0.865 50 H 0.139 0.861 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -4.551 -2.185 0.476 5.070 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.335 6.335 2 C -0.139 4.139 3 Si 0.599 3.401 4 C -0.095 4.095 5 C -0.193 4.193 6 C -0.196 4.196 7 C -0.027 4.027 8 C 0.030 3.970 9 C -0.159 4.159 10 C 0.132 3.868 11 O -0.285 6.285 12 C -0.169 4.169 13 C 0.345 3.655 14 O -0.393 6.393 15 N -0.382 5.382 16 C 0.008 3.992 17 C -0.147 4.147 18 H 0.118 0.882 19 C -0.174 4.174 20 C 0.031 3.969 21 H 0.131 0.869 22 N -0.138 5.138 23 C -0.095 4.095 24 C -0.302 4.302 25 C -0.141 4.141 26 N -0.113 5.113 27 C -0.177 4.177 28 C -0.083 4.083 29 C -0.134 4.134 30 O -0.058 6.058 31 H 0.232 0.768 32 H 0.151 0.849 33 H -0.176 1.176 34 H -0.169 1.169 35 H 0.173 0.827 36 H 0.174 0.826 37 H 0.162 0.838 38 H 0.258 0.742 39 H 0.234 0.766 40 H 0.092 0.908 41 H 0.093 0.907 42 H 0.100 0.900 43 H 0.125 0.875 44 H 0.187 0.813 45 H 0.166 0.834 46 H 0.201 0.799 47 H 0.129 0.871 48 H 0.100 0.900 49 H 0.153 0.847 50 H 0.156 0.844 Dipole moment (debyes) X Y Z Total from point charges -2.764 -0.039 0.422 2.796 hybrid contribution -0.737 -1.890 -0.750 2.162 sum -3.501 -1.928 -0.328 4.010 Atomic orbital electron populations 1.86567 1.16082 1.81726 1.49158 1.24424 0.85251 1.11295 0.92884 0.94275 0.81711 0.76820 0.87265 1.23004 1.00474 0.93875 0.92137 1.21587 1.04078 0.95659 0.97987 1.21911 1.01983 0.98379 0.97305 1.20322 1.03815 0.87573 0.91040 1.17756 0.95589 0.93693 0.89924 1.21599 0.98693 0.97550 0.98058 1.18287 0.91287 0.85793 0.91401 1.84783 1.44583 1.22712 1.76463 1.20477 1.04813 0.95115 0.96543 1.17970 0.79893 0.84549 0.83059 1.90858 1.49574 1.23640 1.75183 1.45888 1.58070 1.12313 1.21926 1.21358 0.97221 0.96295 0.84290 1.22959 0.97258 0.98293 0.96170 0.88201 1.23379 0.98501 1.00888 0.94671 1.22043 0.97617 0.75832 1.01450 0.86925 1.48391 1.43517 1.07260 1.14624 1.22454 1.01261 0.91760 0.94010 1.21565 1.10444 0.97764 1.00447 1.23975 0.99442 0.95463 0.95237 1.77429 1.17026 1.02506 1.14378 1.23529 0.96282 1.02514 0.95334 1.20793 0.95448 0.95476 0.96600 1.20704 1.00237 0.98698 0.93804 1.83938 1.57541 1.37880 1.26464 0.76811 0.84877 1.17642 1.16940 0.82689 0.82618 0.83769 0.74211 0.76637 0.90786 0.90681 0.89971 0.87470 0.81270 0.83410 0.79882 0.87113 0.90001 0.84699 0.84352 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 0.47 12.88 -35.23 -0.45 0.01 16 2 C -0.03 0.03 2.98 36.01 0.11 0.13 16 3 Si 0.70 -0.80 32.11 -169.99 -5.46 -6.26 16 4 C -0.04 -0.01 6.21 -35.51 -0.22 -0.23 16 5 C -0.17 -0.02 10.78 -39.82 -0.43 -0.45 16 6 C -0.18 0.07 10.26 -39.38 -0.40 -0.33 16 7 C 0.02 0.01 7.02 -36.54 -0.26 -0.25 16 8 C 0.03 -0.01 5.87 -104.95 -0.62 -0.62 16 9 C -0.14 -0.04 9.65 -39.06 -0.38 -0.42 16 10 C 0.18 0.20 6.71 -38.75 -0.26 -0.06 16 11 O -0.47 -0.92 11.56 -40.70 -0.47 -1.39 16 12 C -0.17 -0.03 5.89 -104.79 -0.62 -0.65 16 13 C 0.56 0.77 7.75 -12.58 -0.10 0.67 16 14 O -0.52 -2.68 15.14 -16.70 -0.25 -2.94 16 15 N -0.73 1.48 5.50 -61.43 -0.34 1.15 16 16 C 0.13 -0.29 5.51 -4.05 -0.02 -0.32 16 17 C -0.13 0.50 3.34 -89.81 -0.30 0.20 16 18 H 0.10 -0.40 7.00 -51.93 -0.36 -0.76 16 19 C -0.14 0.36 7.44 -25.92 -0.19 0.17 16 20 C 0.13 -0.24 5.18 -67.12 -0.35 -0.59 16 21 H 0.11 -0.20 8.14 -51.93 -0.42 -0.62 16 22 N -0.36 -0.25 3.79 -54.08 -0.21 -0.45 16 23 C 0.05 -0.04 9.62 -17.22 -0.17 -0.20 16 24 C -0.27 -0.04 10.80 -40.01 -0.43 -0.47 16 25 C 0.04 0.07 12.03 -17.36 -0.21 -0.14 16 26 N -0.29 -0.98 12.58 30.63 0.39 -0.59 16 27 C -0.14 0.59 6.88 -25.92 -0.18 0.41 16 28 C -0.06 0.16 9.47 -39.62 -0.38 -0.21 16 29 C -0.12 0.25 9.48 -39.60 -0.38 -0.12 16 30 O -0.16 -0.14 8.79 4.72 0.04 -0.10 16 31 H 0.38 -1.78 8.70 45.56 0.40 -1.38 16 32 H 0.13 -0.18 7.96 -51.93 -0.41 -0.59 16 33 H -0.25 -0.50 7.11 56.52 0.40 -0.10 16 34 H -0.25 -0.32 7.11 56.52 0.40 0.08 16 35 H 0.16 -0.15 8.06 -52.48 -0.42 -0.58 16 36 H 0.16 -0.43 7.24 -52.49 -0.38 -0.81 16 37 H 0.14 -0.05 7.89 -52.49 -0.41 -0.47 16 38 H 0.40 -0.79 9.06 45.56 0.41 -0.38 16 39 H 0.40 -1.92 6.48 -40.82 -0.26 -2.18 16 40 H 0.07 -0.05 8.14 -51.93 -0.42 -0.47 16 41 H 0.07 -0.14 7.84 -51.93 -0.41 -0.54 16 42 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 43 H 0.11 -0.40 8.10 -51.93 -0.42 -0.82 16 44 H 0.17 -0.70 6.67 -52.49 -0.35 -1.05 16 45 H 0.15 -0.26 8.06 -52.49 -0.42 -0.68 16 46 H 0.18 -0.21 8.06 -52.48 -0.42 -0.63 16 47 H 0.11 -0.55 7.89 -51.93 -0.41 -0.96 16 48 H 0.08 -0.39 6.96 -51.93 -0.36 -0.75 16 49 H 0.14 -0.78 6.38 -52.49 -0.33 -1.11 16 50 H 0.14 -0.61 6.95 -52.48 -0.37 -0.98 16 LS Contribution 423.17 15.07 6.38 6.38 Total: 0.00 -12.42 423.17 -11.55 -23.98 By element: Atomic # 1 Polarization: -10.88 SS G_CDS: -5.41 Total: -16.29 kcal Atomic # 6 Polarization: 2.27 SS G_CDS: -5.77 Total: -3.49 kcal Atomic # 7 Polarization: 0.26 SS G_CDS: -0.16 Total: 0.10 kcal Atomic # 8 Polarization: -3.28 SS G_CDS: -1.14 Total: -4.41 kcal Atomic # 14 Polarization: -0.80 SS G_CDS: -5.46 Total: -6.26 kcal Total LS contribution 6.38 Total: 6.38 kcal Total: -12.42 -11.55 -23.98 kcal The number of atoms in the molecule is 50 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_12807986.mol2 50 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 81.847 kcal (2) G-P(sol) polarization free energy of solvation -12.425 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 69.423 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.553 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.978 kcal (6) G-S(sol) free energy of system = (1) + (5) 57.869 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.31 seconds