Wall clock time and date at job start Tue Mar 9 2021 14:02:37 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42902 * 1 3 3 Si 1.86292 * 109.47165 * 2 1 4 4 C 1.50699 * 109.47033 * 120.00208 * 2 1 3 5 5 C 1.38250 * 119.97119 * 245.02274 * 4 2 1 6 6 C 1.38287 * 120.11178 * 179.97438 * 5 4 2 7 7 C 1.38128 * 120.05496 * 359.67816 * 6 5 4 8 8 C 1.38754 * 119.94249 * 0.59717 * 7 6 5 9 9 O 1.35898 * 120.05521 * 179.70167 * 8 7 6 10 10 C 1.42901 * 117.00033 * 359.72285 * 9 8 7 11 11 C 1.52996 * 109.47396 * 180.02562 * 10 9 8 12 12 C 1.52992 * 109.47231 * 179.97438 * 11 10 9 13 13 C 1.50706 * 109.47274 * 180.02562 * 12 11 10 14 14 O 1.21281 * 119.99699 * 0.02562 * 13 12 11 15 15 N 1.34773 * 120.00080 * 180.02562 * 13 12 11 16 16 C 1.46506 * 119.99969 * 180.02562 * 15 13 12 17 17 C 1.52998 * 109.47237 * 179.72043 * 16 15 13 18 18 H 1.08998 * 112.84967 * 316.19646 * 17 16 15 19 19 C 1.53789 * 113.61152 * 87.50111 * 17 16 15 20 20 C 1.53780 * 87.07735 * 139.98241 * 19 17 16 21 21 H 1.09004 * 113.61395 * 220.01775 * 20 19 17 22 22 N 1.46497 * 113.69220 * 89.12741 * 20 19 17 23 23 C 1.34951 * 126.03983 * 347.17778 * 22 20 19 24 24 C 1.35311 * 107.74447 * 179.83984 * 23 22 20 25 25 C 1.39861 * 107.92469 * 0.42250 * 24 23 22 26 26 N 1.30841 * 108.20215 * 359.73710 * 25 24 23 27 27 C 1.53781 * 87.08381 * 334.56357 * 20 19 17 28 28 C 1.38164 * 119.97699 * 64.99668 * 4 2 1 29 29 H 0.96702 * 113.99807 * 59.99931 * 1 2 3 30 30 H 1.08997 * 109.46947 * 239.99817 * 2 1 3 31 31 H 1.48502 * 110.00355 * 298.67825 * 3 2 1 32 32 H 1.48499 * 110.00453 * 59.99968 * 3 2 1 33 33 H 1.07995 * 119.94368 * 359.97419 * 5 4 2 34 34 H 1.08000 * 119.97151 * 179.97438 * 6 5 4 35 35 H 1.07999 * 120.02498 * 180.31644 * 7 6 5 36 36 H 1.08999 * 109.47180 * 59.99655 * 10 9 8 37 37 H 1.09010 * 109.47088 * 300.00579 * 10 9 8 38 38 H 1.09004 * 109.46699 * 59.99914 * 11 10 9 39 39 H 1.08993 * 109.47124 * 300.00065 * 11 10 9 40 40 H 1.09004 * 109.47116 * 60.00455 * 12 11 10 41 41 H 1.08998 * 109.47794 * 300.00366 * 12 11 10 42 42 H 0.97005 * 120.00161 * 359.72088 * 15 13 12 43 43 H 1.09001 * 109.46512 * 299.72412 * 16 15 13 44 44 H 1.08998 * 109.47174 * 59.71534 * 16 15 13 45 45 H 1.09001 * 113.60999 * 254.52627 * 19 17 16 46 46 H 1.09003 * 113.61481 * 25.43474 * 19 17 16 47 47 H 1.07998 * 126.12030 * 0.02562 * 23 22 20 48 48 H 1.08003 * 126.03529 * 180.15875 * 24 23 22 49 49 H 1.08004 * 125.89957 * 179.71450 * 25 24 23 50 50 H 1.08997 * 113.61636 * 270.88696 * 27 20 19 51 51 H 1.08997 * 113.61300 * 139.97975 * 27 20 19 52 52 H 1.08002 * 120.02251 * 0.04413 * 28 4 2 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 2.6383 -0.0116 2.1912 6 6 3.1002 -0.6605 3.3217 7 6 2.8502 -2.0077 3.4967 8 6 2.1459 -2.7126 2.5312 9 8 1.9039 -4.0394 2.6982 10 6 2.4093 -4.6461 3.8892 11 6 2.0422 -6.1313 3.9004 12 6 2.5838 -6.7810 5.1752 13 6 2.2227 -8.2441 5.1860 14 8 1.5944 -8.7203 4.2644 15 7 2.5979 -9.0233 6.2196 16 6 2.2473 -10.4457 6.2298 17 6 2.7944 -11.0968 7.5017 18 1 3.8144 -10.7879 7.7302 19 6 1.8371 -11.0041 8.7018 20 6 2.2530 -12.4444 9.0443 21 1 1.4263 -13.0687 9.3834 22 7 3.4244 -12.5264 9.9203 23 6 4.2631 -11.5130 10.2214 24 6 5.2089 -11.9958 11.0601 25 6 4.9447 -13.3529 11.2713 26 7 3.8751 -13.6721 10.5885 27 6 2.5855 -12.6195 7.5531 28 6 1.6845 -2.0595 1.3977 29 1 -0.3933 0.4417 -0.7651 30 1 1.7923 -0.5139 -0.8900 31 1 1.5880 2.4585 -1.2243 32 1 1.5615 2.4679 1.2084 33 1 2.8303 1.0428 2.0587 34 1 3.6526 -0.1125 4.0706 35 1 3.2067 -2.5129 4.3822 36 1 1.9725 -4.1568 4.7598 37 1 3.4939 -4.5400 3.9190 38 1 2.4795 -6.6202 3.0298 39 1 0.9578 -6.2377 3.8704 40 1 2.1469 -6.2922 6.0461 41 1 3.6682 -6.6746 5.2049 42 1 3.1040 -8.6432 6.9548 43 1 1.1629 -10.5527 6.2042 44 1 2.6811 -10.9331 5.3566 45 1 2.1433 -10.2719 9.4489 46 1 0.7891 -10.9080 8.4180 47 1 4.1904 -10.4978 9.8603 48 1 6.0262 -11.4335 11.4872 49 1 5.5237 -14.0219 11.8907 50 1 1.7421 -12.9649 6.9553 51 1 3.4958 -13.1913 7.3729 52 1 1.1324 -2.6051 0.6467 There are 69 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 69 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_4549616.mol2 52 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:02:37 Heat of formation + Delta-G solvation = 28.814334 kcal Electronic energy + Delta-G solvation = -31329.930986 eV Core-core repulsion = 26878.162746 eV Total energy + Delta-G solvation = -4451.768240 eV No. of doubly occupied orbitals = 69 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 372.188 amu Computer time = 1.18 seconds Orbital eigenvalues (eV) -42.48750 -41.24743 -40.89938 -39.85640 -39.07229 -37.42203 -35.78211 -34.94063 -32.55436 -32.49767 -31.25855 -31.04093 -29.56341 -27.84383 -27.13712 -26.73950 -24.75384 -23.65080 -23.26316 -22.41433 -21.80838 -21.73943 -21.37133 -20.40803 -18.92744 -18.52856 -18.28430 -17.99876 -17.54898 -17.34517 -17.20496 -16.95557 -16.70934 -16.28716 -15.92185 -15.78328 -15.61494 -15.56451 -15.16878 -14.97942 -14.56738 -14.51105 -14.38716 -14.16281 -13.99564 -13.83872 -13.73818 -13.53904 -13.47251 -13.39217 -13.26109 -13.03388 -12.68673 -12.46067 -12.31823 -12.21862 -11.92122 -11.88639 -11.80401 -11.66963 -11.59620 -11.56706 -10.92542 -10.51926 -10.36776 -10.20639 -9.85827 -9.55189 -9.17194 -4.96068 0.26639 0.48242 0.90896 1.26561 1.41766 1.56886 1.59704 1.83732 1.92683 1.95480 2.29996 2.68293 2.96545 3.08963 3.33475 3.35744 3.44030 3.53672 3.75233 3.76114 3.76319 3.84342 3.87369 3.90933 3.97486 4.07308 4.09847 4.14937 4.19391 4.25339 4.28862 4.29598 4.29905 4.36414 4.38828 4.45717 4.56420 4.57608 4.61600 4.68080 4.70691 4.75840 4.84824 4.93529 4.94719 5.02814 5.08153 5.13299 5.28752 5.32667 5.42474 5.52721 5.70844 5.74282 6.05336 6.33097 6.43897 6.45637 6.76456 7.12506 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.535 6.535 2 C -0.079 4.079 3 Si 0.688 3.312 4 C -0.034 4.034 5 C -0.154 4.154 6 C -0.073 4.073 7 C -0.205 4.205 8 C 0.132 3.868 9 O -0.312 6.312 10 C 0.060 3.940 11 C -0.106 4.106 12 C -0.138 4.138 13 C 0.513 3.487 14 O -0.533 6.533 15 N -0.732 5.732 16 C 0.129 3.871 17 C -0.128 4.128 18 H 0.100 0.900 19 C -0.138 4.138 20 C 0.133 3.867 21 H 0.113 0.887 22 N -0.356 5.356 23 C 0.051 3.949 24 C -0.273 4.273 25 C 0.045 3.955 26 N -0.293 5.293 27 C -0.136 4.136 28 C -0.125 4.125 29 H 0.380 0.620 30 H 0.078 0.922 31 H -0.261 1.261 32 H -0.255 1.255 33 H 0.129 0.871 34 H 0.131 0.869 35 H 0.130 0.870 36 H 0.064 0.936 37 H 0.065 0.935 38 H 0.083 0.917 39 H 0.083 0.917 40 H 0.098 0.902 41 H 0.098 0.902 42 H 0.401 0.599 43 H 0.073 0.927 44 H 0.072 0.928 45 H 0.081 0.919 46 H 0.110 0.890 47 H 0.170 0.830 48 H 0.148 0.852 49 H 0.184 0.816 50 H 0.107 0.893 51 H 0.081 0.919 52 H 0.132 0.868 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 4.639 3.031 2.578 6.112 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.342 6.342 2 C -0.188 4.188 3 Si 0.589 3.411 4 C -0.034 4.034 5 C -0.172 4.172 6 C -0.091 4.091 7 C -0.224 4.224 8 C 0.086 3.914 9 O -0.225 6.225 10 C -0.016 4.016 11 C -0.143 4.143 12 C -0.178 4.178 13 C 0.300 3.700 14 O -0.409 6.409 15 N -0.385 5.385 16 C 0.006 3.994 17 C -0.146 4.146 18 H 0.118 0.882 19 C -0.176 4.176 20 C 0.030 3.970 21 H 0.131 0.869 22 N -0.138 5.138 23 C -0.095 4.095 24 C -0.302 4.302 25 C -0.141 4.141 26 N -0.114 5.114 27 C -0.175 4.175 28 C -0.144 4.144 29 H 0.228 0.772 30 H 0.096 0.904 31 H -0.187 1.187 32 H -0.180 1.180 33 H 0.146 0.854 34 H 0.149 0.851 35 H 0.148 0.852 36 H 0.082 0.918 37 H 0.083 0.917 38 H 0.102 0.898 39 H 0.102 0.898 40 H 0.116 0.884 41 H 0.117 0.883 42 H 0.235 0.765 43 H 0.092 0.908 44 H 0.091 0.909 45 H 0.100 0.900 46 H 0.128 0.872 47 H 0.187 0.813 48 H 0.166 0.834 49 H 0.201 0.799 50 H 0.125 0.875 51 H 0.100 0.900 52 H 0.150 0.850 Dipole moment (debyes) X Y Z Total from point charges 3.010 2.125 1.940 4.164 hybrid contribution -0.057 0.702 0.396 0.808 sum 2.953 2.826 2.336 4.708 Atomic orbital electron populations 1.86604 1.17627 1.80206 1.49756 1.24853 0.84627 1.11151 0.98162 0.94942 0.91663 0.74325 0.80149 1.19011 0.96844 0.92819 0.94748 1.20905 1.01703 0.99753 0.94817 1.20883 0.97723 0.93671 0.96874 1.21302 1.04737 0.95945 1.00391 1.18977 0.95010 0.82931 0.94445 1.86078 1.74277 1.19954 1.42215 1.22818 0.98754 0.93729 0.86260 1.21229 1.03506 0.91873 0.97738 1.21527 1.03494 0.92404 1.00340 1.20590 0.79052 0.88636 0.81763 1.90764 1.39282 1.75459 1.35430 1.45997 1.58498 1.10120 1.23893 1.21353 1.00532 0.80193 0.97321 1.22958 1.00095 0.96764 0.94801 0.88201 1.23525 1.01374 0.94912 0.97827 1.22039 0.85994 0.99489 0.89431 0.86930 1.48391 1.21867 1.06803 1.36733 1.22461 0.92426 0.95025 0.99577 1.21563 1.04768 0.95895 1.07991 1.23973 0.95140 0.96090 0.98882 1.77429 1.14803 1.06852 1.12293 1.23382 1.04004 0.95313 0.94803 1.20247 1.02892 0.93781 0.97439 0.77182 0.90386 1.18653 1.17966 0.85398 0.85136 0.85235 0.91798 0.91720 0.89785 0.89813 0.88356 0.88342 0.76505 0.90830 0.90944 0.90003 0.87158 0.81260 0.83399 0.79866 0.87509 0.89991 0.84969 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.53 -1.03 12.81 -35.23 -0.45 -1.48 16 2 C -0.08 -0.04 2.79 36.01 0.10 0.06 16 3 Si 0.69 -0.46 29.85 -169.99 -5.07 -5.53 16 4 C -0.03 -0.07 5.38 -104.65 -0.56 -0.63 16 5 C -0.15 -0.15 8.67 -39.56 -0.34 -0.49 16 6 C -0.07 -0.02 10.04 -39.60 -0.40 -0.42 16 7 C -0.21 -0.15 9.04 -39.43 -0.36 -0.50 16 8 C 0.13 0.34 6.69 -39.22 -0.26 0.08 16 9 O -0.31 -0.82 10.14 -19.42 -0.20 -1.01 16 10 C 0.06 -0.06 4.74 37.16 0.18 0.12 16 11 C -0.11 0.06 4.87 -26.74 -0.13 -0.07 16 12 C -0.14 0.44 5.70 -27.88 -0.16 0.28 16 13 C 0.51 -0.11 7.83 -10.98 -0.09 -0.20 16 14 O -0.53 -2.47 15.98 5.56 0.09 -2.38 16 15 N -0.73 2.14 5.56 -60.29 -0.33 1.81 16 16 C 0.13 -0.31 5.51 -4.04 -0.02 -0.33 16 17 C -0.13 0.50 3.33 -89.80 -0.30 0.20 16 18 H 0.10 -0.41 6.96 -51.93 -0.36 -0.77 16 19 C -0.14 0.57 6.88 -25.91 -0.18 0.39 16 20 C 0.13 -0.23 5.18 -67.12 -0.35 -0.58 16 21 H 0.11 -0.18 8.14 -51.93 -0.42 -0.60 16 22 N -0.36 -0.28 3.79 -54.07 -0.21 -0.48 16 23 C 0.05 -0.03 9.62 -17.22 -0.17 -0.20 16 24 C -0.27 -0.05 10.80 -40.02 -0.43 -0.48 16 25 C 0.05 0.07 12.03 -17.37 -0.21 -0.14 16 26 N -0.29 -1.00 12.58 30.62 0.39 -0.61 16 27 C -0.14 0.36 7.44 -25.92 -0.19 0.16 16 28 C -0.12 -0.38 9.62 -39.43 -0.38 -0.76 16 29 H 0.38 -0.85 8.74 45.56 0.40 -0.45 16 30 H 0.08 -0.08 7.96 -51.93 -0.41 -0.50 16 31 H -0.26 -0.33 7.11 56.52 0.40 0.08 16 32 H -0.25 -0.60 7.05 56.52 0.40 -0.20 16 33 H 0.13 -0.10 4.86 -52.49 -0.26 -0.35 16 34 H 0.13 -0.29 8.06 -52.49 -0.42 -0.71 16 35 H 0.13 -0.21 6.30 -52.49 -0.33 -0.54 16 36 H 0.06 -0.14 7.65 -51.93 -0.40 -0.54 16 37 H 0.06 -0.16 7.67 -51.92 -0.40 -0.56 16 38 H 0.08 0.08 8.10 -51.93 -0.42 -0.34 16 39 H 0.08 0.09 8.10 -51.93 -0.42 -0.33 16 40 H 0.10 -0.51 8.14 -51.93 -0.42 -0.93 16 41 H 0.10 -0.51 8.14 -51.93 -0.42 -0.94 16 42 H 0.40 -2.33 8.47 -40.82 -0.35 -2.67 16 43 H 0.07 -0.12 7.84 -51.93 -0.41 -0.53 16 44 H 0.07 -0.06 8.14 -51.93 -0.42 -0.49 16 45 H 0.08 -0.37 7.00 -51.93 -0.36 -0.73 16 46 H 0.11 -0.52 7.90 -51.93 -0.41 -0.93 16 47 H 0.17 -0.69 6.66 -52.49 -0.35 -1.04 16 48 H 0.15 -0.26 8.06 -52.48 -0.42 -0.68 16 49 H 0.18 -0.21 8.06 -52.48 -0.42 -0.63 16 50 H 0.11 -0.38 8.10 -51.93 -0.42 -0.81 16 51 H 0.08 -0.08 8.14 -51.93 -0.42 -0.50 16 52 H 0.13 0.40 8.06 -52.49 -0.42 -0.03 16 LS Contribution 426.29 15.07 6.42 6.42 Total: 0.00 -11.98 426.29 -11.51 -23.49 By element: Atomic # 1 Polarization: -8.82 SS G_CDS: -7.90 Total: -16.72 kcal Atomic # 6 Polarization: 0.74 SS G_CDS: -4.25 Total: -3.51 kcal Atomic # 7 Polarization: 0.87 SS G_CDS: -0.15 Total: 0.71 kcal Atomic # 8 Polarization: -4.31 SS G_CDS: -0.56 Total: -4.87 kcal Atomic # 14 Polarization: -0.46 SS G_CDS: -5.07 Total: -5.53 kcal Total LS contribution 6.42 Total: 6.42 kcal Total: -11.98 -11.51 -23.49 kcal The number of atoms in the molecule is 52 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_4549616.mol2 52 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 52.309 kcal (2) G-P(sol) polarization free energy of solvation -11.981 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 40.328 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -11.514 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -23.495 kcal (6) G-S(sol) free energy of system = (1) + (5) 28.814 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.18 seconds