Wall clock time and date at job start Tue Mar 9 2021 14:02:50 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42895 * 1 3 3 Si 1.86297 * 109.47298 * 2 1 4 4 C 1.50698 * 109.47195 * 120.00142 * 2 1 3 5 5 C 1.38266 * 119.94588 * 64.99580 * 4 2 1 6 6 C 1.38146 * 120.05408 * 180.02562 * 5 4 2 7 7 C 1.38733 * 119.94762 * 359.97438 * 6 5 4 8 8 O 1.35898 * 120.05764 * 180.02562 * 7 6 5 9 9 C 1.42888 * 117.00126 * 180.02562 * 8 7 6 10 10 C 1.50697 * 109.47504 * 180.02562 * 9 8 7 11 11 C 1.36423 * 125.80537 * 89.99538 * 10 9 8 12 12 C 1.47378 * 127.18495 * 0.02562 * 11 10 9 13 13 O 1.21611 * 120.00462 * 359.70243 * 12 11 10 14 14 N 1.34777 * 119.99717 * 179.70649 * 12 11 10 15 15 C 1.46500 * 120.00199 * 180.02562 * 14 12 11 16 16 C 1.52995 * 109.47274 * 180.02562 * 15 14 12 17 17 H 1.08995 * 112.91121 * 43.74714 * 16 15 14 18 18 C 1.53785 * 113.61328 * 175.00103 * 16 15 14 19 19 C 1.53781 * 87.08277 * 139.98018 * 18 16 15 20 20 H 1.09002 * 113.61228 * 220.01683 * 19 18 16 21 21 N 1.46500 * 113.61711 * 89.19510 * 19 18 16 22 22 C 1.34948 * 126.04121 * 276.24807 * 21 19 18 23 23 C 1.35313 * 107.74870 * 179.84046 * 22 21 19 24 24 C 1.39872 * 107.91990 * 0.41922 * 23 22 21 25 25 N 1.30840 * 108.20152 * 359.74151 * 24 23 22 26 26 C 1.53776 * 113.61424 * 272.49225 * 16 15 14 27 27 C 1.47017 * 105.61981 * 179.75676 * 11 10 9 28 28 C 1.34179 * 105.95071 * 0.22709 * 27 11 10 29 29 O 1.33652 * 125.80345 * 270.14166 * 10 9 8 30 30 C 1.38726 * 119.88285 * 0.27891 * 7 6 5 31 31 C 1.38148 * 119.95022 * 359.46740 * 30 7 6 32 32 H 0.96701 * 114.00146 * 299.99917 * 1 2 3 33 33 H 1.09007 * 109.46917 * 239.99823 * 2 1 3 34 34 H 1.48499 * 109.99975 * 178.68374 * 3 2 1 35 35 H 1.48500 * 110.00023 * 299.99682 * 3 2 1 36 36 H 1.07999 * 119.97384 * 359.97438 * 5 4 2 37 37 H 1.08000 * 120.02506 * 180.02562 * 6 5 4 38 38 H 1.09001 * 109.47671 * 60.00196 * 9 8 7 39 39 H 1.09006 * 109.47412 * 300.00495 * 9 8 7 40 40 H 0.97003 * 120.00178 * 359.97438 * 14 12 11 41 41 H 1.09000 * 109.47496 * 59.99820 * 15 14 12 42 42 H 1.09003 * 109.47005 * 299.99639 * 15 14 12 43 43 H 1.08993 * 113.61827 * 25.42377 * 18 16 15 44 44 H 1.09006 * 113.68471 * 254.53603 * 18 16 15 45 45 H 1.08000 * 126.12316 * 359.97438 * 22 21 19 46 46 H 1.07997 * 126.04317 * 180.15988 * 23 22 21 47 47 H 1.07996 * 125.90222 * 179.75568 * 24 23 22 48 48 H 1.09003 * 113.61687 * 105.46892 * 26 16 15 49 49 H 1.09009 * 113.61565 * 334.57240 * 26 16 15 50 50 H 1.07995 * 127.02169 * 180.20750 * 27 11 10 51 51 H 1.08004 * 125.43381 * 179.97438 * 28 27 11 52 52 H 1.08006 * 120.02515 * 179.72084 * 30 7 6 53 53 H 1.08002 * 119.97385 * 180.23030 * 31 30 7 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0500 1.7564 0.0000 4 6 1.9313 -0.7104 1.2304 5 6 1.6839 -2.0605 1.3972 6 6 2.1429 -2.7139 2.5246 7 6 2.8531 -2.0144 3.4895 8 8 3.3061 -2.6550 4.5991 9 6 4.0292 -1.8718 5.5506 10 6 4.4492 -2.7450 6.7047 11 6 5.6171 -3.4446 6.7925 12 6 6.7015 -3.4964 5.7958 13 8 6.6027 -2.8723 4.7567 14 7 7.8026 -4.2356 6.0358 15 6 8.8808 -4.2867 5.0453 16 6 10.0038 -5.1895 5.5599 17 1 9.6348 -6.1120 6.0081 18 6 11.1339 -5.4089 4.5403 19 6 12.1141 -5.2908 5.7194 20 1 13.0177 -4.7295 5.4815 21 7 12.3950 -6.5683 6.3792 22 6 11.6422 -7.1501 7.3362 23 6 12.2390 -8.3151 7.6791 24 6 13.4013 -8.4453 6.9119 25 7 13.4959 -7.3987 6.1324 26 6 11.0371 -4.4529 6.4285 27 6 5.5708 -4.1308 8.0919 28 6 4.3988 -3.7882 8.6482 29 8 3.7396 -2.9680 7.8152 30 6 3.0954 -0.6587 3.3222 31 6 2.6388 -0.0110 2.1906 32 1 -0.3933 0.4417 0.7651 33 1 1.7923 -0.5139 -0.8900 34 1 3.5346 1.7702 0.0321 35 1 1.5616 2.4678 -1.2085 36 1 1.1307 -2.6045 0.6460 37 1 1.9498 -3.7685 2.6542 38 1 3.3928 -1.0662 5.9169 39 1 4.9140 -1.4481 5.0752 40 1 7.8816 -4.7332 6.8647 41 1 9.2693 -3.2820 4.8789 42 1 8.4944 -4.6867 4.1079 43 1 11.2276 -4.6033 3.8122 44 1 11.1222 -6.3967 4.0795 45 1 10.7262 -6.7573 7.7523 46 1 11.8833 -9.0181 8.4177 47 1 14.1000 -9.2677 6.9553 48 1 10.9463 -4.6691 7.4930 49 1 11.1044 -3.3857 6.2167 50 1 6.3257 -4.7784 8.5125 51 1 4.0426 -4.1201 9.6123 52 1 3.6441 -0.1110 4.0741 53 1 2.8304 1.0436 2.0583 There are 75 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 75 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946172_4549634.mol2 53 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:02:50 Heat of formation + Delta-G solvation = 60.401397 kcal Electronic energy + Delta-G solvation = -37356.706624 eV Core-core repulsion = 32358.485108 eV Total energy + Delta-G solvation = -4998.221516 eV No. of doubly occupied orbitals = 75 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 410.172 amu Computer time = 1.67 seconds Orbital eigenvalues (eV) -43.70531 -42.41998 -41.30918 -40.73436 -39.67036 -39.22056 -37.18894 -35.78640 -34.12307 -32.87332 -32.36258 -31.99468 -31.39087 -31.02734 -29.23371 -27.69674 -26.90539 -26.18402 -25.14394 -23.99675 -23.74394 -22.43567 -22.34991 -22.05447 -21.75763 -20.98335 -20.28092 -19.51269 -19.17336 -18.26535 -17.89953 -17.44309 -17.28470 -17.22263 -16.94408 -16.74716 -16.54587 -16.42262 -16.12493 -15.90931 -15.74154 -15.59572 -15.55113 -15.30965 -14.79845 -14.68771 -14.58435 -14.43986 -14.35750 -14.16216 -13.90750 -13.80297 -13.69803 -13.58748 -13.48301 -13.28981 -13.10886 -12.96912 -12.28509 -12.13271 -12.08824 -12.07345 -11.79660 -11.77867 -11.62125 -11.54363 -11.13749 -10.96127 -10.41778 -10.38366 -10.20470 -10.07361 -9.81600 -9.52404 -9.25876 -5.01283 -0.03203 0.25260 0.27648 0.94223 1.04924 1.32196 1.52157 1.52557 1.63856 1.92620 1.96210 2.04346 2.12881 2.47108 2.62918 3.16452 3.29882 3.35324 3.52179 3.55235 3.62535 3.65870 3.68772 3.74331 3.79619 3.90621 3.90925 3.94796 4.03065 4.11146 4.15784 4.27788 4.35007 4.40721 4.44014 4.46975 4.48279 4.60701 4.63525 4.64688 4.67988 4.71081 4.75315 4.81918 4.86320 4.89078 4.93791 4.96238 5.11598 5.12523 5.17962 5.23426 5.27753 5.35860 5.45958 5.66969 5.73189 5.89908 6.16989 6.24784 6.43076 6.75917 6.78934 7.09859 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.556 6.556 2 C -0.069 4.069 3 Si 0.776 3.224 4 C -0.162 4.162 5 C -0.059 4.059 6 C -0.164 4.164 7 C 0.125 3.875 8 O -0.323 6.323 9 C 0.134 3.866 10 C 0.039 3.961 11 C -0.224 4.224 12 C 0.582 3.418 13 O -0.574 6.574 14 N -0.704 5.704 15 C 0.134 3.866 16 C -0.112 4.112 17 H 0.108 0.892 18 C -0.135 4.135 19 C 0.120 3.880 20 H 0.107 0.893 21 N -0.360 5.360 22 C 0.055 3.945 23 C -0.289 4.289 24 C 0.032 3.968 25 N -0.343 5.343 26 C -0.122 4.122 27 C -0.195 4.195 28 C -0.013 4.013 29 O -0.178 6.178 30 C -0.204 4.204 31 C -0.074 4.074 32 H 0.395 0.605 33 H 0.104 0.896 34 H -0.288 1.288 35 H -0.298 1.298 36 H 0.138 0.862 37 H 0.132 0.868 38 H 0.103 0.897 39 H 0.107 0.893 40 H 0.416 0.584 41 H 0.074 0.926 42 H 0.057 0.943 43 H 0.115 0.885 44 H 0.062 0.938 45 H 0.205 0.795 46 H 0.165 0.835 47 H 0.198 0.802 48 H 0.095 0.905 49 H 0.121 0.879 50 H 0.194 0.806 51 H 0.251 0.749 52 H 0.150 0.850 53 H 0.152 0.848 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges -0.854 1.278 9.129 9.257 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.364 6.364 2 C -0.179 4.179 3 Si 0.682 3.318 4 C -0.162 4.162 5 C -0.077 4.077 6 C -0.182 4.182 7 C 0.080 3.920 8 O -0.237 6.237 9 C 0.060 3.940 10 C -0.014 4.014 11 C -0.228 4.228 12 C 0.370 3.630 13 O -0.455 6.455 14 N -0.356 5.356 15 C 0.011 3.989 16 C -0.130 4.130 17 H 0.126 0.874 18 C -0.174 4.174 19 C 0.018 3.982 20 H 0.125 0.875 21 N -0.142 5.142 22 C -0.091 4.091 23 C -0.318 4.318 24 C -0.154 4.154 25 N -0.165 5.165 26 C -0.160 4.160 27 C -0.214 4.214 28 C -0.079 4.079 29 O -0.073 6.073 30 C -0.223 4.223 31 C -0.091 4.091 32 H 0.245 0.755 33 H 0.122 0.878 34 H -0.215 1.215 35 H -0.226 1.226 36 H 0.155 0.845 37 H 0.150 0.850 38 H 0.121 0.879 39 H 0.125 0.875 40 H 0.253 0.747 41 H 0.092 0.908 42 H 0.075 0.925 43 H 0.134 0.866 44 H 0.081 0.919 45 H 0.222 0.778 46 H 0.183 0.817 47 H 0.214 0.786 48 H 0.114 0.886 49 H 0.139 0.861 50 H 0.211 0.789 51 H 0.267 0.733 52 H 0.168 0.832 53 H 0.169 0.831 Dipole moment (debyes) X Y Z Total from point charges 0.043 2.609 6.582 7.080 hybrid contribution 0.123 -1.625 0.569 1.726 sum 0.165 0.984 7.150 7.220 Atomic orbital electron populations 1.86461 1.17285 1.82208 1.50469 1.25114 0.85224 1.10721 0.96842 0.93811 0.77716 0.75393 0.84841 1.20354 1.02690 0.95054 0.98129 1.20941 0.96704 0.93990 0.96073 1.20619 1.02320 1.01055 0.94229 1.19170 0.94417 0.91770 0.86680 1.86047 1.69032 1.39004 1.29663 1.21160 0.98186 0.90820 0.83853 1.22061 0.90839 1.00325 0.88160 1.21387 0.97221 1.05486 0.98755 1.17440 0.81810 0.78837 0.84902 1.90787 1.80574 1.46176 1.27997 1.45608 1.17628 1.49298 1.23106 1.21342 0.86145 1.00158 0.91242 1.22825 0.93160 0.99254 0.97773 0.87391 1.23384 0.93834 1.03602 0.96601 1.22254 0.99700 0.81044 0.95199 0.87497 1.48579 1.17738 1.17554 1.30376 1.23049 0.98987 0.94621 0.92420 1.21894 0.99404 1.01430 1.09072 1.24375 0.99076 0.97236 0.94668 1.77346 1.08178 1.05261 1.25695 1.23501 0.91472 1.00413 1.00637 1.23257 1.00756 1.04534 0.92850 1.24923 0.92630 0.93140 0.97163 1.83795 1.44370 1.53997 1.25151 1.21431 1.06169 0.93287 1.01405 1.21019 0.95654 1.00060 0.92406 0.75504 0.87813 1.21540 1.22619 0.84461 0.85012 0.87931 0.87546 0.74672 0.90805 0.92495 0.86628 0.91873 0.77817 0.81730 0.78559 0.88649 0.86084 0.78878 0.73266 0.83237 0.83056 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.56 -0.90 12.83 -148.98 -1.91 -2.81 16 2 C -0.07 -0.09 2.80 71.24 0.20 0.11 16 3 Si 0.78 -0.75 29.80 68.60 2.04 1.29 16 4 C -0.16 -0.43 5.35 -19.85 -0.11 -0.53 16 5 C -0.06 -0.27 9.68 22.25 0.22 -0.05 16 6 C -0.16 -1.07 9.99 22.37 0.22 -0.84 16 7 C 0.12 0.87 6.69 22.51 0.15 1.02 16 8 O -0.32 -2.78 10.12 -92.40 -0.93 -3.71 16 9 C 0.13 0.51 4.74 71.23 0.34 0.84 16 10 C 0.04 0.15 7.00 25.26 0.18 0.32 16 11 C -0.22 -0.42 6.31 -18.99 -0.12 -0.54 16 12 C 0.58 2.37 7.81 86.65 0.68 3.05 16 13 O -0.57 -6.75 14.85 -4.07 -0.06 -6.81 16 14 N -0.70 2.64 5.55 -466.42 -2.59 0.05 16 15 C 0.13 -0.55 5.51 86.38 0.48 -0.07 16 16 C -0.11 0.91 3.33 -10.27 -0.03 0.88 16 17 H 0.11 -1.00 6.89 -2.39 -0.02 -1.02 16 18 C -0.14 0.63 7.44 31.12 0.23 0.86 16 19 C 0.12 -0.40 5.18 45.52 0.24 -0.16 16 20 H 0.11 -0.25 8.14 -2.39 -0.02 -0.27 16 21 N -0.36 -0.64 3.80 -324.99 -1.23 -1.87 16 22 C 0.06 -0.12 9.62 83.54 0.80 0.68 16 23 C -0.29 -0.02 10.80 21.99 0.24 0.21 16 24 C 0.03 0.12 12.03 85.24 1.03 1.15 16 25 N -0.34 -2.77 12.58 -57.02 -0.72 -3.49 16 26 C -0.12 1.16 6.88 31.12 0.21 1.38 16 27 C -0.20 1.13 10.60 23.65 0.25 1.38 16 28 C -0.01 0.08 12.03 66.89 0.80 0.88 16 29 O -0.18 -0.21 10.52 4.48 0.05 -0.17 16 30 C -0.20 -0.59 9.04 22.37 0.20 -0.39 16 31 C -0.07 -0.07 8.66 22.26 0.19 0.12 16 32 H 0.40 -2.59 8.70 -74.06 -0.64 -3.23 16 33 H 0.10 0.27 7.96 -2.38 -0.02 0.25 16 34 H -0.29 -1.20 7.11 99.48 0.71 -0.49 16 35 H -0.30 -1.88 7.11 99.48 0.71 -1.17 16 36 H 0.14 0.38 8.06 -2.91 -0.02 0.35 16 37 H 0.13 0.72 8.06 -2.91 -0.02 0.69 16 38 H 0.10 -0.14 7.65 -2.39 -0.02 -0.15 16 39 H 0.11 0.52 6.02 -2.38 -0.01 0.51 16 40 H 0.42 -4.23 7.64 -92.71 -0.71 -4.94 16 41 H 0.07 -0.23 7.84 -2.39 -0.02 -0.25 16 42 H 0.06 0.01 8.14 -2.39 -0.02 -0.01 16 43 H 0.12 -0.77 8.10 -2.39 -0.02 -0.78 16 44 H 0.06 -0.02 8.14 -2.38 -0.02 -0.04 16 45 H 0.21 -2.17 6.63 -2.91 -0.02 -2.19 16 46 H 0.17 -0.71 8.06 -2.91 -0.02 -0.74 16 47 H 0.20 -0.22 8.06 -2.91 -0.02 -0.24 16 48 H 0.10 -1.10 7.04 -2.39 -0.02 -1.12 16 49 H 0.12 -1.34 7.90 -2.38 -0.02 -1.36 16 50 H 0.19 -2.62 7.74 -2.91 -0.02 -2.64 16 51 H 0.25 -3.74 8.06 -2.91 -0.02 -3.76 16 52 H 0.15 -0.23 6.30 -2.91 -0.02 -0.25 16 53 H 0.15 -0.66 4.90 -2.91 -0.01 -0.68 16 Total: 0.00 -31.46 441.78 0.71 -30.76 By element: Atomic # 1 Polarization: -23.21 SS G_CDS: -0.33 Total: -23.54 kcal Atomic # 6 Polarization: 3.91 SS G_CDS: 6.39 Total: 10.30 kcal Atomic # 7 Polarization: -0.76 SS G_CDS: -4.54 Total: -5.30 kcal Atomic # 8 Polarization: -10.64 SS G_CDS: -2.86 Total: -13.50 kcal Atomic # 14 Polarization: -0.75 SS G_CDS: 2.04 Total: 1.29 kcal Total: -31.46 0.71 -30.76 kcal The number of atoms in the molecule is 53 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_4549634.mol2 53 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 91.157 kcal (2) G-P(sol) polarization free energy of solvation -31.462 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 59.695 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.706 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -30.755 kcal (6) G-S(sol) free energy of system = (1) + (5) 60.401 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.67 seconds