Wall clock time and date at job start Tue Mar 9 2021 14:03:01 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * DEV - DEVELOPER OPTIONS ARE ALLOWED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS USER-SPECIFIED * DIELEC - THE SOLVENT DIELECTRIC CONSTANT IS 2.06 * IOFR - THE SOLVENT INDEX OF REFRACTION IS 1.4345 * ALPHA - THE SOLVENT ALPHA IS 0.00 * BETA - THE SOLVENT BETA IS 0.00 * GAMMA - THE SOLVENT MACROSCOPIC SURFACE TENSION IS * 38.93 CAL MOL^-1 ANGSTROM^-2 * FACARB - THE FRACTION OF AROMATIC CARBONS IS 0.00 * FEHALO - THE FRACTION OF ELECTRONEGATIVE HALOGENS IS 0.00 ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.47408 * 2 1 4 4 C 1.50703 * 109.47256 * 240.00038 * 2 1 3 5 5 C 1.38240 * 119.94285 * 300.00358 * 4 2 1 6 6 C 1.38172 * 120.05477 * 179.97438 * 5 4 2 7 7 N 1.48010 * 120.02600 * 179.97438 * 6 5 4 8 8 O 1.21800 * 120.00253 * 0.02984 * 7 6 5 9 9 O 1.21798 * 119.99775 * 180.02562 * 7 6 5 10 10 C 1.38702 * 119.94665 * 0.02562 * 6 5 4 11 11 O 1.35896 * 120.05923 * 179.97438 * 10 6 5 12 12 C 1.42905 * 117.00039 * 179.97438 * 11 10 6 13 13 C 1.50699 * 109.46972 * 180.02562 * 12 11 10 14 14 O 1.21282 * 120.00041 * 0.02562 * 13 12 11 15 15 N 1.34779 * 120.00037 * 180.02562 * 13 12 11 16 16 C 1.46500 * 120.00169 * 180.02562 * 15 13 12 17 17 C 1.52996 * 109.47364 * 179.97438 * 16 15 13 18 18 H 1.09004 * 112.84274 * 45.33730 * 17 16 15 19 19 C 1.53771 * 113.61549 * 176.52599 * 17 16 15 20 20 C 1.53782 * 87.08005 * 139.98662 * 19 17 16 21 21 H 1.09002 * 113.61469 * 219.93549 * 20 19 17 22 22 N 1.46500 * 113.61804 * 89.12032 * 20 19 17 23 23 C 1.34943 * 126.03151 * 275.00444 * 22 20 19 24 24 C 1.35320 * 107.74714 * 179.97438 * 23 22 20 25 25 C 1.39872 * 107.91680 * 359.97438 * 24 23 22 26 26 N 1.30842 * 108.20022 * 359.73855 * 25 24 23 27 27 C 1.53777 * 113.61734 * 274.14026 * 17 16 15 28 28 C 1.38761 * 119.88577 * 0.24885 * 10 6 5 29 29 C 1.38121 * 119.94480 * 359.47160 * 28 10 6 30 30 H 0.96698 * 113.99882 * 299.99777 * 1 2 3 31 31 H 1.09004 * 109.46922 * 120.00614 * 2 1 3 32 32 H 1.48504 * 110.00095 * 178.67805 * 3 2 1 33 33 H 1.48494 * 110.00254 * 300.00101 * 3 2 1 34 34 H 1.07998 * 119.97628 * 359.97438 * 5 4 2 35 35 H 1.09000 * 109.47187 * 300.00222 * 12 11 10 36 36 H 1.09001 * 109.46558 * 60.00270 * 12 11 10 37 37 H 0.96996 * 119.99844 * 359.97438 * 15 13 12 38 38 H 1.09004 * 109.46923 * 300.00119 * 16 15 13 39 39 H 1.09004 * 109.47042 * 59.99705 * 16 15 13 40 40 H 1.09001 * 113.61732 * 254.53435 * 19 17 16 41 41 H 1.09008 * 113.61616 * 25.43933 * 19 17 16 42 42 H 1.08003 * 126.13452 * 359.97438 * 23 22 20 43 43 H 1.07994 * 126.04322 * 179.97438 * 24 23 22 44 44 H 1.07999 * 125.89961 * 179.97438 * 25 24 23 45 45 H 1.08996 * 113.61191 * 334.56305 * 27 17 16 46 46 H 1.08998 * 113.61389 * 105.46898 * 27 17 16 47 47 H 1.07995 * 120.02661 * 179.72513 * 28 10 6 48 48 H 1.07991 * 119.97598 * 180.27442 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5966 -2.0339 -1.4481 6 6 2.0555 -2.6873 -2.5758 7 7 1.6972 -4.1045 -2.8079 8 8 0.9971 -4.6951 -2.0050 9 8 2.1024 -4.6801 -3.8018 10 6 2.8531 -2.0144 -3.4895 11 8 3.3061 -2.6550 -4.5991 12 6 4.1222 -1.8996 -5.4966 13 6 4.5267 -2.7683 -6.6597 14 8 4.1525 -3.9206 -6.7149 15 7 5.3043 -2.2646 -7.6386 16 6 5.6970 -3.1089 -8.7696 17 6 6.5709 -2.3003 -9.7305 18 1 7.3379 -1.7195 -9.2180 19 6 7.1083 -3.1218 -10.9140 20 6 6.8344 -1.8895 -11.7921 21 1 6.4258 -2.1341 -12.7726 22 7 7.9617 -0.9565 -11.8623 23 6 8.2371 0.0238 -10.9767 24 6 9.3566 0.6570 -11.3973 25 6 9.7801 0.0422 -12.5801 26 7 8.9480 -0.9289 -12.8566 27 6 5.7667 -1.4872 -10.7585 28 6 3.1924 -0.6877 -3.2659 29 6 2.7263 -0.0372 -2.1400 30 1 -0.3933 0.4417 0.7651 31 1 1.7923 -0.5140 0.8900 32 1 3.5347 1.7702 0.0322 33 1 1.5616 2.4679 -1.2084 34 1 0.9759 -2.5576 -0.7362 35 1 3.5602 -1.0407 -5.8633 36 1 5.0138 -1.5540 -4.9734 37 1 5.6032 -1.3429 -7.5947 38 1 6.2583 -3.9686 -8.4035 39 1 4.8050 -3.4535 -9.2928 40 1 8.1661 -3.3705 -10.8284 41 1 6.4889 -3.9831 -11.1648 42 1 7.6663 0.2606 -10.0909 43 1 9.8380 1.4898 -10.9064 44 1 10.6466 0.3187 -13.1624 45 1 4.7799 -1.9006 -10.9666 46 1 5.7429 -0.4181 -10.5475 47 1 3.8169 -0.1629 -3.9736 48 1 2.9864 0.9966 -1.9677 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=GENORG IOFR=1.4345 ALPHA=0.00 BETA=0.00 GAMMA=38.93 & DIELEC=2.06 FACARB=0.00 FEHALO=0.00 DEV s_22_16946172_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:03:01 Heat of formation + Delta-G solvation = 53.124989 kcal Electronic energy + Delta-G solvation = -34846.071242 eV Core-core repulsion = 29875.415994 eV Total energy + Delta-G solvation = -4970.655248 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.151 amu Computer time = 1.19 seconds Orbital eigenvalues (eV) -43.05099 -42.52848 -41.79089 -40.89335 -40.00754 -39.31925 -37.60469 -37.15383 -35.84545 -33.61197 -32.67003 -32.46997 -31.12106 -30.66943 -28.44552 -27.62988 -27.18551 -26.67113 -24.84627 -23.98235 -22.73711 -22.46236 -21.92664 -21.71093 -20.51725 -20.39929 -19.50991 -19.20673 -18.78298 -18.58224 -18.34440 -18.06157 -17.75859 -17.56540 -17.20206 -16.67964 -16.58514 -16.24732 -16.10416 -15.73106 -15.63350 -15.52297 -15.22365 -14.89658 -14.66827 -14.55622 -14.40481 -14.14113 -13.99103 -13.91555 -13.69373 -13.50787 -13.16540 -13.07043 -12.87817 -12.55611 -12.37971 -12.23801 -12.22281 -11.97198 -11.86085 -11.83082 -11.75679 -11.60109 -11.04658 -10.96916 -10.67221 -10.40393 -10.35186 -9.91441 -9.58784 -5.25177 -1.16867 -0.41248 0.34886 0.49862 0.87218 0.96590 1.02262 1.33831 1.35194 1.38337 1.63048 1.88351 1.89180 2.10861 2.84860 2.89643 2.97568 3.04656 3.04884 3.25763 3.35094 3.38237 3.43471 3.49521 3.50010 3.55741 3.71095 3.71573 3.83478 3.92809 4.02395 4.10881 4.14194 4.24412 4.24918 4.32623 4.36312 4.41225 4.52509 4.56583 4.64397 4.64826 4.71595 4.80885 4.87981 4.88661 5.04305 5.10956 5.39107 5.66841 5.67375 6.01634 6.13160 6.35902 6.73103 6.92045 6.93736 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.545 6.545 2 C -0.071 4.071 3 Si 0.691 3.309 4 C -0.111 4.111 5 C 0.013 3.987 6 C -0.074 4.074 7 N 0.029 4.971 8 O -0.174 6.174 9 O -0.118 6.118 10 C 0.200 3.800 11 O -0.252 6.252 12 C 0.030 3.970 13 C 0.513 3.487 14 O -0.494 6.494 15 N -0.727 5.727 16 C 0.132 3.868 17 C -0.128 4.128 18 H 0.100 0.900 19 C -0.135 4.135 20 C 0.134 3.866 21 H 0.114 0.886 22 N -0.356 5.356 23 C 0.050 3.950 24 C -0.273 4.273 25 C 0.045 3.955 26 N -0.292 5.292 27 C -0.139 4.139 28 C -0.207 4.207 29 C -0.032 4.032 30 H 0.388 0.612 31 H 0.083 0.917 32 H -0.251 1.251 33 H -0.247 1.247 34 H 0.167 0.833 35 H 0.101 0.899 36 H 0.101 0.899 37 H 0.401 0.599 38 H 0.076 0.924 39 H 0.077 0.923 40 H 0.082 0.918 41 H 0.108 0.892 42 H 0.170 0.830 43 H 0.148 0.852 44 H 0.185 0.815 45 H 0.111 0.889 46 H 0.081 0.919 47 H 0.156 0.844 48 H 0.140 0.860 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.233 10.928 3.860 11.802 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.352 6.352 2 C -0.181 4.181 3 Si 0.591 3.409 4 C -0.112 4.112 5 C -0.006 4.006 6 C -0.158 4.158 7 N 0.549 4.451 8 O -0.384 6.384 9 O -0.341 6.341 10 C 0.150 3.850 11 O -0.162 6.162 12 C -0.048 4.048 13 C 0.297 3.703 14 O -0.366 6.366 15 N -0.382 5.382 16 C 0.009 3.991 17 C -0.147 4.147 18 H 0.118 0.882 19 C -0.174 4.174 20 C 0.031 3.969 21 H 0.131 0.869 22 N -0.138 5.138 23 C -0.096 4.096 24 C -0.302 4.302 25 C -0.141 4.141 26 N -0.113 5.113 27 C -0.177 4.177 28 C -0.226 4.226 29 C -0.049 4.049 30 H 0.236 0.764 31 H 0.101 0.899 32 H -0.176 1.176 33 H -0.172 1.172 34 H 0.184 0.816 35 H 0.119 0.881 36 H 0.119 0.881 37 H 0.235 0.765 38 H 0.095 0.905 39 H 0.096 0.904 40 H 0.101 0.899 41 H 0.126 0.874 42 H 0.187 0.813 43 H 0.166 0.834 44 H 0.201 0.799 45 H 0.129 0.871 46 H 0.100 0.900 47 H 0.174 0.826 48 H 0.157 0.843 Dipole moment (debyes) X Y Z Total from point charges 2.229 9.760 2.108 10.231 hybrid contribution 0.495 0.607 0.429 0.893 sum 2.724 10.368 2.536 11.015 Atomic orbital electron populations 1.86489 1.16663 1.82003 1.50039 1.24646 0.86307 1.10654 0.96520 0.94633 0.80663 0.77578 0.88020 1.19251 1.01069 0.93221 0.97688 1.20812 0.93047 0.93482 0.93227 1.20576 1.10445 0.84147 1.00658 1.43303 0.99195 1.02189 1.00367 1.94553 1.35166 1.66598 1.42048 1.94696 1.54713 1.67509 1.17223 1.18641 0.90040 0.90676 0.85663 1.86502 1.62880 1.37394 1.29390 1.22730 0.96348 0.94946 0.90804 1.19790 0.79381 0.88150 0.83026 1.90879 1.52149 1.17051 1.76491 1.45749 1.53143 1.16107 1.23233 1.21407 0.98694 0.93263 0.85700 1.22959 0.98342 0.98331 0.95024 0.88155 1.23377 1.03345 0.96940 0.93761 1.22083 0.84471 0.89467 1.00907 0.86854 1.48397 1.21196 1.25510 1.18706 1.22444 0.98600 0.91899 0.96609 1.21566 1.00684 1.07180 1.00783 1.23981 0.99269 0.93877 0.96968 1.77434 1.00530 1.22131 1.11179 1.23560 0.98240 1.01644 0.94256 1.21196 1.07079 0.92833 1.01538 1.21113 0.92890 0.99301 0.91633 0.76353 0.89912 1.17597 1.17171 0.81600 0.88076 0.88080 0.76488 0.90547 0.90448 0.89904 0.87386 0.81310 0.83421 0.79852 0.87081 0.89998 0.82638 0.84264 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 13. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.54 1.02 12.74 -35.23 -0.45 0.57 16 2 C -0.07 0.18 2.81 36.01 0.10 0.28 16 3 Si 0.69 -2.74 29.78 -169.99 -5.06 -7.81 16 4 C -0.11 0.02 5.42 -104.60 -0.57 -0.55 16 5 C 0.01 0.02 9.11 -39.60 -0.36 -0.34 16 6 C -0.07 -0.27 6.87 -79.80 -0.55 -0.82 16 7 N 0.03 0.20 4.45 34.03 0.15 0.35 16 8 O -0.17 -1.30 18.45 -29.46 -0.54 -1.85 16 9 O -0.12 -1.04 17.24 -36.49 -0.63 -1.67 16 10 C 0.20 0.33 6.67 -39.22 -0.26 0.07 16 11 O -0.25 -0.66 7.68 -49.77 -0.38 -1.05 16 12 C 0.03 -0.07 5.22 36.01 0.19 0.12 16 13 C 0.51 0.11 7.91 -10.99 -0.09 0.02 16 14 O -0.49 -2.93 16.50 -14.35 -0.24 -3.17 16 15 N -0.73 2.52 5.56 -60.29 -0.33 2.19 16 16 C 0.13 -0.38 5.50 -4.04 -0.02 -0.40 16 17 C -0.13 0.57 3.33 -89.82 -0.30 0.27 16 18 H 0.10 -0.47 6.98 -51.93 -0.36 -0.84 16 19 C -0.14 0.40 7.44 -25.92 -0.19 0.21 16 20 C 0.13 -0.27 5.19 -67.03 -0.35 -0.62 16 21 H 0.11 -0.21 8.14 -51.93 -0.42 -0.63 16 22 N -0.36 -0.17 3.79 -53.98 -0.20 -0.37 16 23 C 0.05 -0.05 9.62 -17.22 -0.17 -0.22 16 24 C -0.27 0.03 10.80 -40.01 -0.43 -0.41 16 25 C 0.05 0.06 12.03 -17.36 -0.21 -0.15 16 26 N -0.29 -0.93 12.58 30.63 0.39 -0.54 16 27 C -0.14 0.64 6.89 -25.83 -0.18 0.46 16 28 C -0.21 0.36 9.04 -39.43 -0.36 0.00 16 29 C -0.03 0.04 8.66 -39.60 -0.34 -0.30 16 30 H 0.39 -2.64 8.74 45.56 0.40 -2.24 16 31 H 0.08 -0.35 7.96 -51.93 -0.41 -0.76 16 32 H -0.25 0.52 7.11 56.52 0.40 0.92 16 33 H -0.25 0.29 7.11 56.52 0.40 0.69 16 34 H 0.17 0.18 7.61 -52.49 -0.40 -0.22 16 35 H 0.10 -0.56 7.68 -51.93 -0.40 -0.95 16 36 H 0.10 -0.56 7.65 -51.93 -0.40 -0.96 16 37 H 0.40 -2.76 8.47 -40.82 -0.35 -3.11 16 38 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 39 H 0.08 -0.16 7.87 -51.93 -0.41 -0.57 16 40 H 0.08 -0.10 8.14 -51.93 -0.42 -0.52 16 41 H 0.11 -0.42 8.10 -51.92 -0.42 -0.84 16 42 H 0.17 -0.77 6.66 -52.48 -0.35 -1.12 16 43 H 0.15 -0.30 8.06 -52.49 -0.42 -0.72 16 44 H 0.18 -0.24 8.06 -52.49 -0.42 -0.67 16 45 H 0.11 -0.57 7.92 -51.93 -0.41 -0.98 16 46 H 0.08 -0.42 6.97 -51.93 -0.36 -0.78 16 47 H 0.16 -0.86 6.30 -52.49 -0.33 -1.19 16 48 H 0.14 -0.41 4.87 -52.49 -0.26 -0.67 16 LS Contribution 409.81 15.07 6.18 6.18 Total: 0.00 -15.24 409.81 -10.98 -26.22 By element: Atomic # 1 Polarization: -10.92 SS G_CDS: -5.77 Total: -16.68 kcal Atomic # 6 Polarization: 1.71 SS G_CDS: -4.08 Total: -2.37 kcal Atomic # 7 Polarization: 1.63 SS G_CDS: 0.00 Total: 1.63 kcal Atomic # 8 Polarization: -4.93 SS G_CDS: -2.24 Total: -7.17 kcal Atomic # 14 Polarization: -2.74 SS G_CDS: -5.06 Total: -7.81 kcal Total LS contribution 6.18 Total: 6.18 kcal Total: -15.24 -10.98 -26.22 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 79.346 kcal (2) G-P(sol) polarization free energy of solvation -15.241 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 64.105 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy -10.980 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -26.221 kcal (6) G-S(sol) free energy of system = (1) + (5) 53.125 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.19 seconds