Wall clock time and date at job start Tue Mar 9 2021 14:03:00 AMSOL-version 7.1 by G. D. Hawkins, D. J. Giesen, G. C. Lynch, C. C. Chambers, I. Rossi, J. W. Storer, J. Li, J. D. Thompson, P. Winget, B. J. Lynch, D. Rinaldi, D. A. Liotard, C. J. Cramer, and D. G. Truhlar Copyright 2004 by Regents of the University of Minnesota. All rights reserved. Notice: recipients of this code are asked to comply with the user agreement in Section 1 of the documentation file. ******************************************************************************* * 1SCF - SCF CALCULATION WITHOUT GEOMETRY OPTIMIZATION * - USE EF ROUTINE FOR MINIMUM SEARCH (DEFAULT) * GEO-OK - OVERRIDE INTERATOMIC DISTANCE CHECK * TLIMIT= - A TIME OF 15. SECONDS REQUESTED * CHARGE - CHARGE ON SYSTEM= 0 * AM1 - THE AM1 HAMILTONIAN TO BE USED * SM5.42R - SM5.42R CALCULATIONS WILL BE PERFORMED * - CHARGE MODEL 2 WILL BE USED (CM2A) * - THE SOLVENT IS WATER ******************************************************************************* Atom NO. Chemical Bond length Bond angle Dihedral angle number (k) symbol (angstroms) (degrees) (degrees) (I) NA:I NB:NA:I NC:NB:NA:I NA NB NC 1 1 O 2 2 C 1.42899 * 1 3 3 Si 1.86299 * 109.47408 * 2 1 4 4 C 1.50703 * 109.47256 * 240.00038 * 2 1 3 5 5 C 1.38240 * 119.94285 * 300.00358 * 4 2 1 6 6 C 1.38172 * 120.05477 * 179.97438 * 5 4 2 7 7 N 1.48010 * 120.02600 * 179.97438 * 6 5 4 8 8 O 1.21800 * 120.00253 * 0.02984 * 7 6 5 9 9 O 1.21798 * 119.99775 * 180.02562 * 7 6 5 10 10 C 1.38702 * 119.94665 * 0.02562 * 6 5 4 11 11 O 1.35896 * 120.05923 * 179.97438 * 10 6 5 12 12 C 1.42905 * 117.00039 * 179.97438 * 11 10 6 13 13 C 1.50699 * 109.46972 * 180.02562 * 12 11 10 14 14 O 1.21282 * 120.00041 * 0.02562 * 13 12 11 15 15 N 1.34779 * 120.00037 * 180.02562 * 13 12 11 16 16 C 1.46500 * 120.00169 * 180.02562 * 15 13 12 17 17 C 1.52996 * 109.47364 * 179.97438 * 16 15 13 18 18 H 1.09004 * 112.84274 * 45.33730 * 17 16 15 19 19 C 1.53771 * 113.61549 * 176.52599 * 17 16 15 20 20 C 1.53782 * 87.08005 * 139.98662 * 19 17 16 21 21 H 1.09002 * 113.61469 * 219.93549 * 20 19 17 22 22 N 1.46500 * 113.61804 * 89.12032 * 20 19 17 23 23 C 1.34943 * 126.03151 * 275.00444 * 22 20 19 24 24 C 1.35320 * 107.74714 * 179.97438 * 23 22 20 25 25 C 1.39872 * 107.91680 * 359.97438 * 24 23 22 26 26 N 1.30842 * 108.20022 * 359.73855 * 25 24 23 27 27 C 1.53777 * 113.61734 * 274.14026 * 17 16 15 28 28 C 1.38761 * 119.88577 * 0.24885 * 10 6 5 29 29 C 1.38121 * 119.94480 * 359.47160 * 28 10 6 30 30 H 0.96698 * 113.99882 * 299.99777 * 1 2 3 31 31 H 1.09004 * 109.46922 * 120.00614 * 2 1 3 32 32 H 1.48504 * 110.00095 * 178.67805 * 3 2 1 33 33 H 1.48494 * 110.00254 * 300.00101 * 3 2 1 34 34 H 1.07998 * 119.97628 * 359.97438 * 5 4 2 35 35 H 1.09000 * 109.47187 * 300.00222 * 12 11 10 36 36 H 1.09001 * 109.46558 * 60.00270 * 12 11 10 37 37 H 0.96996 * 119.99844 * 359.97438 * 15 13 12 38 38 H 1.09004 * 109.46923 * 300.00119 * 16 15 13 39 39 H 1.09004 * 109.47042 * 59.99705 * 16 15 13 40 40 H 1.09001 * 113.61732 * 254.53435 * 19 17 16 41 41 H 1.09008 * 113.61616 * 25.43933 * 19 17 16 42 42 H 1.08003 * 126.13452 * 359.97438 * 23 22 20 43 43 H 1.07994 * 126.04322 * 179.97438 * 24 23 22 44 44 H 1.07999 * 125.89961 * 179.97438 * 25 24 23 45 45 H 1.08996 * 113.61191 * 334.56305 * 27 17 16 46 46 H 1.08998 * 113.61389 * 105.46898 * 27 17 16 47 47 H 1.07995 * 120.02661 * 179.72513 * 28 10 6 48 48 H 1.07991 * 119.97598 * 180.27442 * 29 28 10 Note: An asterisk (*) indicates this parameter was or will be optimized. Cartesian coordinates (angstroms) NO. Atom X Y Z 1 8 0.0000 0.0000 0.0000 2 6 1.4290 0.0000 0.0000 3 14 2.0501 1.7564 0.0000 4 6 1.9314 -0.7104 -1.2305 5 6 1.5966 -2.0339 -1.4481 6 6 2.0555 -2.6873 -2.5758 7 7 1.6972 -4.1045 -2.8079 8 8 0.9971 -4.6951 -2.0050 9 8 2.1024 -4.6801 -3.8018 10 6 2.8531 -2.0144 -3.4895 11 8 3.3061 -2.6550 -4.5991 12 6 4.1222 -1.8996 -5.4966 13 6 4.5267 -2.7683 -6.6597 14 8 4.1525 -3.9206 -6.7149 15 7 5.3043 -2.2646 -7.6386 16 6 5.6970 -3.1089 -8.7696 17 6 6.5709 -2.3003 -9.7305 18 1 7.3379 -1.7195 -9.2180 19 6 7.1083 -3.1218 -10.9140 20 6 6.8344 -1.8895 -11.7921 21 1 6.4258 -2.1341 -12.7726 22 7 7.9617 -0.9565 -11.8623 23 6 8.2371 0.0238 -10.9767 24 6 9.3566 0.6570 -11.3973 25 6 9.7801 0.0422 -12.5801 26 7 8.9480 -0.9289 -12.8566 27 6 5.7667 -1.4872 -10.7585 28 6 3.1924 -0.6877 -3.2659 29 6 2.7263 -0.0372 -2.1400 30 1 -0.3933 0.4417 0.7651 31 1 1.7923 -0.5140 0.8900 32 1 3.5347 1.7702 0.0322 33 1 1.5616 2.4679 -1.2084 34 1 0.9759 -2.5576 -0.7362 35 1 3.5602 -1.0407 -5.8633 36 1 5.0138 -1.5540 -4.9734 37 1 5.6032 -1.3429 -7.5947 38 1 6.2583 -3.9686 -8.4035 39 1 4.8050 -3.4535 -9.2928 40 1 8.1661 -3.3705 -10.8284 41 1 6.4889 -3.9831 -11.1648 42 1 7.6663 0.2606 -10.0909 43 1 9.8380 1.4898 -10.9064 44 1 10.6466 0.3187 -13.1624 45 1 4.7799 -1.9006 -10.9666 46 1 5.7429 -0.4181 -10.5475 47 1 3.8169 -0.1629 -3.9736 48 1 2.9864 0.9966 -1.9677 There are 71 doubly filled levels RHF calculation, no. of doubly occupied orbitals= 71 No. of singly occupied orbitals= 1 REFERENCES FOR PARAMETERS IN GAS-PHASE HAMILTONIAN: H: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) C: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) N: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) O: (AM1): M.J.S. DEWAR ET AL, J. AM. CHEM. SOC. 107 3902-3909 (1985) Si: (AM1): M.J.S.DEWAR, C. JIE, ORGANOMETALLICS, 6, 1486-1490 (1987). REFERENCE FOR CHARGE MODEL 2: J. Li, J. Xing, C. J. Cramer, and D. G. Truhlar, J. Chem. Phys. 111 (1999) 885. REFERENCE FOR THE PARAMETERIZATION OF THE SM5.42R SOLVATION MODEL: J. Li, T. Zhu, G. D. Hawkins, P. Winget, D. A. Liotard, C. J. Cramer, and D. G. Truhlar, Theor. Chem. Acc. 103 (1999) 9-63 P. Winget, J. D. Thompson C. J. Cramer,and D. G. Truhlar, J. Phys. Chem. B. submitted. CHARGE=0 AM1 1SCF TLIMIT=15 GEO-OK SM5.42R & SOLVNT=WATER s_22_16946172_4549638.mol2 48 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED SCF FIELD WAS ACHIEVED Wall clock time and date at job start Tue Mar 9 2021 14:03:00 Heat of formation + Delta-G solvation = 47.812035 kcal Electronic energy + Delta-G solvation = -34846.301629 eV Core-core repulsion = 29875.415994 eV Total energy + Delta-G solvation = -4970.885635 eV No. of doubly occupied orbitals = 71 and no. of open levels = 1 Molecular weight (most abundant/longest-lived isotopes) = 389.151 amu Computer time = 1.36 seconds Orbital eigenvalues (eV) -43.37593 -42.42669 -41.85653 -40.85557 -39.86893 -39.27102 -37.64917 -37.40421 -35.79770 -33.65552 -32.59794 -32.38634 -31.06260 -30.54908 -28.27267 -27.91122 -26.91239 -26.52592 -24.72686 -24.00706 -22.80309 -22.34297 -21.85734 -21.60836 -20.53691 -20.30718 -19.86055 -19.27098 -18.74839 -18.67223 -18.35254 -17.87922 -17.69997 -17.50533 -17.08331 -16.53807 -16.44481 -16.15448 -15.98792 -15.66271 -15.53460 -15.37723 -15.13154 -14.79430 -14.54352 -14.42326 -14.23518 -13.98922 -13.83758 -13.81510 -13.57697 -13.28456 -13.03917 -12.99263 -12.76323 -12.71107 -12.42421 -12.32660 -12.22243 -12.13407 -11.97057 -11.79642 -11.63055 -11.53549 -11.05924 -10.97966 -10.42798 -10.38669 -10.24127 -9.84745 -9.52437 -4.88752 -1.40969 -0.36006 0.04957 0.25438 0.94535 1.12716 1.27741 1.40532 1.52127 1.68627 1.90147 1.92334 1.92500 2.24821 2.97762 3.06581 3.16239 3.24432 3.28938 3.47690 3.49411 3.53173 3.59982 3.67387 3.82601 3.91237 3.92052 3.93665 4.03367 4.13602 4.15542 4.23836 4.35111 4.40346 4.44247 4.49208 4.63620 4.67722 4.69601 4.70126 4.74760 4.85688 4.88704 4.95172 4.96080 5.10744 5.11362 5.17287 5.30962 5.63934 5.72759 6.17456 6.37342 6.39181 6.75955 6.85942 7.10058 Net atomic charges, atomic populations, and dipole contributions calculated with CM2 Atom NO. Type Charge No. of electrons 1 O -0.568 6.568 2 C -0.088 4.088 3 Si 0.778 3.222 4 C -0.117 4.117 5 C 0.001 3.999 6 C -0.101 4.101 7 N 0.034 4.966 8 O -0.192 6.192 9 O -0.171 6.171 10 C 0.194 3.806 11 O -0.288 6.288 12 C 0.022 3.978 13 C 0.508 3.492 14 O -0.565 6.565 15 N -0.704 5.704 16 C 0.134 3.866 17 C -0.108 4.108 18 H 0.113 0.887 19 C -0.138 4.138 20 C 0.119 3.881 21 H 0.104 0.896 22 N -0.360 5.360 23 C 0.056 3.944 24 C -0.290 4.290 25 C 0.031 3.969 26 N -0.345 5.345 27 C -0.122 4.122 28 C -0.188 4.188 29 C -0.027 4.027 30 H 0.407 0.593 31 H 0.098 0.902 32 H -0.270 1.270 33 H -0.281 1.281 34 H 0.160 0.840 35 H 0.142 0.858 36 H 0.142 0.858 37 H 0.423 0.577 38 H 0.057 0.943 39 H 0.068 0.932 40 H 0.063 0.937 41 H 0.113 0.887 42 H 0.209 0.791 43 H 0.165 0.835 44 H 0.197 0.803 45 H 0.119 0.881 46 H 0.099 0.901 47 H 0.204 0.796 48 H 0.163 0.837 For the charges calculated by CM2: Dipole moment (debyes) X Y Z Total from point charges 2.786 15.095 5.216 16.212 Note: The Mulliken population analysis charges presented below were not used in the solvation calculation but are provided for completeness. The chosen solvation model uses CM2 partial charges for calculating solvation energies. Net atomic charges, atomic populations, and dipole contributions using Mulliken population analysis Atom NO. Type Charge No. of electrons 1 O -0.379 6.379 2 C -0.196 4.196 3 Si 0.680 3.320 4 C -0.119 4.119 5 C -0.018 4.018 6 C -0.186 4.186 7 N 0.546 4.454 8 O -0.402 6.402 9 O -0.385 6.385 10 C 0.144 3.856 11 O -0.198 6.198 12 C -0.055 4.055 13 C 0.294 3.706 14 O -0.443 6.443 15 N -0.360 5.360 16 C 0.010 3.990 17 C -0.127 4.127 18 H 0.131 0.869 19 C -0.177 4.177 20 C 0.017 3.983 21 H 0.122 0.878 22 N -0.143 5.143 23 C -0.089 4.089 24 C -0.319 4.319 25 C -0.154 4.154 26 N -0.167 5.167 27 C -0.160 4.160 28 C -0.207 4.207 29 C -0.045 4.045 30 H 0.259 0.741 31 H 0.116 0.884 32 H -0.196 1.196 33 H -0.208 1.208 34 H 0.178 0.822 35 H 0.160 0.840 36 H 0.160 0.840 37 H 0.261 0.739 38 H 0.076 0.924 39 H 0.087 0.913 40 H 0.082 0.918 41 H 0.131 0.869 42 H 0.225 0.775 43 H 0.183 0.817 44 H 0.213 0.787 45 H 0.137 0.863 46 H 0.117 0.883 47 H 0.221 0.779 48 H 0.180 0.820 Dipole moment (debyes) X Y Z Total from point charges 2.815 13.928 3.419 14.616 hybrid contribution 0.340 -0.574 0.028 0.668 sum 3.155 13.355 3.447 14.149 Atomic orbital electron populations 1.86443 1.17133 1.82706 1.51589 1.25030 0.86216 1.12371 0.96026 0.93416 0.78105 0.74295 0.86135 1.19695 1.00859 0.92429 0.98884 1.20882 0.93642 0.94452 0.92784 1.20876 1.13008 0.81901 1.02854 1.43796 0.98335 1.03714 0.99577 1.94499 1.35624 1.68045 1.42005 1.94681 1.56365 1.69135 1.18317 1.18849 0.89805 0.91699 0.85214 1.86475 1.63681 1.39517 1.30122 1.23151 0.98061 0.94671 0.89602 1.20401 0.78741 0.87561 0.83941 1.90861 1.55096 1.20175 1.78156 1.45567 1.51532 1.16935 1.21920 1.21320 0.98358 0.93273 0.86025 1.22813 0.98103 0.97676 0.94095 0.86894 1.23384 1.02328 0.97240 0.94702 1.22302 0.84826 0.89874 1.01311 0.87772 1.48581 1.21091 1.26091 1.18498 1.23077 0.98337 0.90555 0.96975 1.21900 1.01397 1.08001 1.00568 1.24376 0.99506 0.93711 0.97851 1.77352 1.02180 1.23754 1.13380 1.23523 0.97577 1.02586 0.92300 1.21688 1.06098 0.91001 1.01878 1.21494 0.91654 1.00187 0.91120 0.74081 0.88409 1.19587 1.20797 0.82202 0.84011 0.84016 0.73906 0.92448 0.91325 0.91840 0.86895 0.77475 0.81707 0.78669 0.86313 0.88256 0.77902 0.82016 Number of geometries 1 Number of calculations of the screened coulomb radii 1 The total number of SCF iterations 15. Note: The number of geometries may not correspond to the number of cycles due to rejected geometry changes. In the following table subtotal= G_P + SS G_CDS. Atom Chem. CM2 G_P Area Sigma k SS G_CDS Subtotal M number symbol chg. (kcal) (Ang**2) cal/(Ang**2) (kcal) (kcal) value 1 O -0.57 2.61 12.74 -148.98 -1.90 0.71 16 2 C -0.09 0.58 2.81 71.24 0.20 0.78 16 3 Si 0.78 -8.11 29.78 68.60 2.04 -6.07 16 4 C -0.12 0.17 5.42 -19.85 -0.11 0.06 16 5 C 0.00 0.01 9.11 22.25 0.20 0.21 16 6 C -0.10 -0.90 6.87 36.47 0.25 -0.64 16 7 N 0.03 0.59 4.45 -46.24 -0.21 0.38 16 8 O -0.19 -3.56 18.45 18.89 0.35 -3.21 16 9 O -0.17 -3.75 17.24 25.61 0.44 -3.31 16 10 C 0.19 0.56 6.67 22.51 0.15 0.71 16 11 O -0.29 -1.58 7.68 -63.36 -0.49 -2.06 16 12 C 0.02 -0.15 5.22 71.24 0.37 0.22 16 13 C 0.51 0.03 7.91 87.66 0.69 0.72 16 14 O -0.57 -7.98 16.50 16.00 0.26 -7.72 16 15 N -0.70 6.05 5.56 -463.05 -2.57 3.48 16 16 C 0.13 -0.79 5.50 86.38 0.47 -0.32 16 17 C -0.11 1.09 3.33 -10.27 -0.03 1.06 16 18 H 0.11 -1.37 6.98 -2.38 -0.02 -1.39 16 19 C -0.14 0.74 7.44 31.12 0.23 0.97 16 20 C 0.12 -0.49 5.19 45.58 0.24 -0.25 16 21 H 0.10 -0.27 8.14 -2.39 -0.02 -0.29 16 22 N -0.36 -0.28 3.79 -324.70 -1.23 -1.51 16 23 C 0.06 -0.21 9.62 83.54 0.80 0.59 16 24 C -0.29 0.31 10.80 21.99 0.24 0.55 16 25 C 0.03 0.10 12.03 85.24 1.03 1.12 16 26 N -0.35 -2.58 12.58 -57.02 -0.72 -3.30 16 27 C -0.12 1.34 6.89 31.18 0.21 1.56 16 28 C -0.19 1.23 9.04 22.37 0.20 1.44 16 29 C -0.03 0.15 8.66 22.25 0.19 0.34 16 30 H 0.41 -6.01 8.74 -74.06 -0.65 -6.66 16 31 H 0.10 -0.97 7.96 -2.38 -0.02 -0.98 16 32 H -0.27 1.94 7.11 99.48 0.71 2.65 16 33 H -0.28 1.30 7.11 99.48 0.71 2.01 16 34 H 0.16 0.68 7.61 -2.91 -0.02 0.66 16 35 H 0.14 -2.18 7.68 -2.39 -0.02 -2.20 16 36 H 0.14 -2.18 7.65 -2.39 -0.02 -2.20 16 37 H 0.42 -7.37 8.47 -92.71 -0.79 -8.16 16 38 H 0.06 -0.08 8.14 -2.39 -0.02 -0.10 16 39 H 0.07 -0.24 7.87 -2.38 -0.02 -0.26 16 40 H 0.06 -0.07 8.14 -2.39 -0.02 -0.09 16 41 H 0.11 -0.75 8.10 -2.38 -0.02 -0.77 16 42 H 0.21 -2.69 6.66 -2.91 -0.02 -2.71 16 43 H 0.17 -0.92 8.06 -2.91 -0.02 -0.94 16 44 H 0.20 -0.32 8.06 -2.91 -0.02 -0.34 16 45 H 0.12 -1.42 7.92 -2.39 -0.02 -1.44 16 46 H 0.10 -1.37 6.97 -2.39 -0.02 -1.39 16 47 H 0.20 -3.43 6.30 -2.91 -0.02 -3.45 16 48 H 0.16 -1.59 4.87 -2.92 -0.01 -1.61 16 Total: 0.00 -44.14 409.81 0.99 -43.16 By element: Atomic # 1 Polarization: -29.33 SS G_CDS: -0.34 Total: -29.67 kcal Atomic # 6 Polarization: 3.77 SS G_CDS: 5.35 Total: 9.11 kcal Atomic # 7 Polarization: 3.78 SS G_CDS: -4.73 Total: -0.94 kcal Atomic # 8 Polarization: -14.25 SS G_CDS: -1.33 Total: -15.58 kcal Atomic # 14 Polarization: -8.11 SS G_CDS: 2.04 Total: -6.07 kcal Total: -44.14 0.99 -43.16 kcal The number of atoms in the molecule is 48 The average number of expansion shells was 16.00 The maximum number of expansion shells was 16 The minimum number of expansion shells was 16 **** NOTA BENE **** This is the net solvation energy for this exact molecular structure (nuclear and electronic)! The standard-state solvation energy should be obtained as the difference between the heat of formation plus delta-G solvation for the relaxed solvated system and that for the relaxed gas-phase system. s_22_16946172_4549638.mol2 48 1SCF run This is a breakdown of the solvation energy calculated without geometric relaxation in solution: (1) E-EN(sol) electronic-nuclear energy of solute 90.971 kcal (2) G-P(sol) polarization free energy of solvation -44.145 kcal (3) G-ENP(sol) elect.-nuc.-pol. free energy of system 46.826 kcal (4) G-CDS(sol) cavity-dispersion-solvent structure free energy 0.986 kcal (5) G-P-CDS(sol) = G-P(sol) + G-CDS(sol) = (2) + (4) -43.159 kcal (6) G-S(sol) free energy of system = (1) + (5) 47.812 kcal 1SCF WAS SPECIFIED, SO GEOMETRY OPTIMIZATION WAS NOT USED Total computer time = 1.36 seconds